FB2026_03 , released September 17, 2026
Transcript: Dmel\lncRNA:CR46004-RA
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General Information
Symbol
Dmel\lncRNA:CR46004-RA
Species
D. melanogaster
Annotation Symbol
CR46004-RA
FlyBase ID
FBtr0347128
Feature type
Associated gene
Evidence Rank
Length (nt)
7941
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            AGTAGCTGGCGGGCCTTACGCCCGGCAAGTCTTCGTTCTTCGGTCATCGGTCTTCGGTCCTTGGAACACCCCCGGTGAAT
            CCCCCTTGAATTCCTGACGCCGACGCCTCGCGATTACTCCAATTCGTGTGCGTGCGATAAGAAAGTCGAAGTCTCGAAAC
            TCGAGGACCACAGCCAAAGTATCTTATTGGAGTCGCAGGCGAAATCATTCCTTAACGCGACGCGTGTCGGTGCGGTTGTG
            TTCATAGATCCCCATTTCAAAAATACAAAAAATACTTAGATTCGCTGGGCATATCCGTGGATTAACATTGTGACATCGCG
            GTGAACTTGAACAACCTACGATGATTTATTACAGAAAATGACACTCGAATTGAGAAATATTTTTCTGATGGATTGTGAGG
            CTTAGGAAACTCAAGAAGCAGAGCATTTTCGAATTCATAAAATATCACTATTAAGAAAAAAAAAAACCTCAAGGCGTTGG
            CGGAAAAGAAAAATTTGTTCTTGACCTAGAAACAAAGGCAGGCACAGAACGATGACGACATCAGGCCGGAGAAAATGAGG
            AGGAAAACCCAAGACGACGTCACCAAAAAGGCCAAGACACGAGCAAAGGAAAGCGAACCAAACAAAAATTAAAATTAAAA
            CAAGGACACGAAAAAAAAGCGTCATCGTCCTTGGCTAACGGAGAGTGTGAGAGAGAGGGCAATAGCAACAGCCGGCAGCT
            GTGGGCCAGGCCAAAAAGAAAAGCGGGAAAAGCAGGCAGAACTGGGTTAATAAGCAAAACGCAGACAGCGATGATGATGA
            AAAACGATGATGATGAGCATGGCAACGAAGTGCATAATCAACAAGAGAGCAAAATTGTGGGTGCGAACTTTACTCATTTT
            CATTTAGGTTCCCGAGGAGCACAAACTTTTCTCGTTCCCAGCATGCCACTGTATGTATGTGTGTGTGTGTGTGCGTGTGG
            GTGAGTATCTGTGTGTGCAAGGACGACTCCTTGCTGTTTTTAATTTCATTGCAAAAGGAAATGAACGAAGGCAGGCAAAA
            TTGAGAGCCGGGAAAGAGAGAAAACCTCAAGGAGCGCGAAAATGAAGCCAAAGACACTGCCATCCGCAGTCTGAGCGCCA
            AGTTTTCCCGGCTTTCACCCCACCCCTCGCCGATTTTCCACCCCCGCAGGCTAAATTAGCTGCAGCAGCCGCGCGACATT
            AAAAAGTTTGCCGGGTTCCTTCGCGCGACTCGCGCGAAAAAAATAAAAAGAAAAAGCAAAGAAAATTCGCTGTGAAAAGT
            GAAATTAAAAGCCAGCCAAAAGGGAGGGAGAAAAGTTTTCTTTTGCAATGCGAAAAAATGAAGTGCAGGGAAATTAGTGG
            CGTAAATTTGAGCAAGGTCAAAGTCGAGACATCCATCGCCATGACAATGAACCAAACTGTCTTTTCCAGTTTTGAAAGTT
            CATAAGTTTTTTAAACTTTTTTACTTTTTTTAACTCCCAAAACTCCCATTAATAGGGGACAAGTATAACAAATGCAGCAA
            TTCCAAAAAGTAACTTAATTACTTTATTAGCAAAACTTCATTTGATTCCATTTTGCCATCAATTAACGGCCGATAATTCC
            ACTTATTGGGTTCGGCAACTTTGTAAGCGAGTCGCCATTAATTATTCAAACCCGATTCGTTGGCCAAACAACTTCCTTTA
            GAGATATCATAATTAATTTAGCAAACAAGAAAAAAATTGAACTGTAAATTGATTTGGCTCATTAGGCGGCGTGAGCAAAC
            AAATGGCAGCACTTAAATAAGCCGTTAGCAGAAAGAGAAGAGAAGTTGGCAATAGAAGAAGTAGCCGACGGTTATACGCT
            TATGGAGATACAAATCTTAAGATACCAATCTAAAGATACAAATTAACAGGCGGCAGCAGAAATTTTCATATAATAATAGG
            GTTTTATATCACTTCTATATTTGGCAAAAAACGAAGCGCTTTATGAGAATGCATTAAAAATAACCGGCCATAAAGTATGA
            ATCTATTTTGGTTAAAACGCAACTACGGCGCACTTTAATTGAAATTACCAGACACACCAGCGGGCAGCCGTTGGTAATTA
            AACTGGTTTTAAATTAACATTAAACAAAAATTAAATAAATAAGATAAGCAAACTACAGTTAGCGGTCGCGGCAGACATGT
            TTGAGTGCCGCACAAAATTAGCAGAGTGAGTGAGGAGAGACCGTGCAACATGTTGCCTGGCAGAATGCCGACGCTTATAG
            ATAAATTTCTGTCAAAATTGCTGATTGACTTCATTAATAACCACGCGCCTAGCCAGGAAAACCAGGCAGCCAGCCAGTCA
            GCTAGGTGCACTTGAAATAATTTTTAGTACCCTTAAAAACAAATACTCAAAATGAAGCAAGAAACTTATATCAAAGAAAT
            CACATTTTCGAAATTTGCAAGGGCATTTAATATGAAATTGGTGAACTTGTAATACTTGCAACCTATGTAGATGTTTATGT
            CACAAAATTATACAGAATTTCATGTTATTTTTTCCCAGTGCAGCTTTCAAGCCCGGCTGACAGCTCAACAAGGCAGCTGC
            TGAAATGCAAAGCAGATGGCCGAGCCTGCCAGCCGAGGGGGTGTCAATTGAGGGGGATTTCCTCTGGCGGGTAATTGAGT
            GGTTGGCAAAAGGAGGAGATGGTGGTGGATGAGGGGGAGGGTTCCAGTGCAAATTAATAGCAAACTTGTAGGACCTGAAT
            GCAGTGTTTCGGTGGCGCGATTGATAAGCTGCGTGCTGCGTGGCCATGTTCGGTGTCCAAATGCTGCCACAACATGTTTT
            TCCTTCGCACTGCTGCAGCGGCAAACTGGTCGCGAATGGGTCGAAATCAGTGCGAATATTTATGTTTGTCCAGCAGCAGC
            AGCAGCAGCGGGCTAAAAAACAATTTTAATGGGCGCACTGCGCACTGACCATGAGGAAGCGATTTGGCCAATTTTGCATC
            TGCATCTGCCGGTTTTGGCGCCCCGTTTAATTGCGCTGCATAAACCGTTTGCTTTTAATTGGCCATCGAACGGAGGGTGG
            AGGAGGAGGAGGAGCAGGCACAGCATGAAGGGGGGCCAAATTAAAAATGCCAGGCAGATAACTCAATAAATGTACAGATT
            AGTTACAGACGCAATCAATCAGCGTCAAAGGCGAGCCGCACTAAATTGTCAGACTTGCTAATAATTGCAACAGCAACAAC
            AGCAACAGCAATATCCGCAAGTGCAACCAAGAGCCAGCCTTTCGATTCCACCAAAACGCAGACGTGGCACTCACTGACCA
            TCTGCACTGGGCAAAAATTAAGGGGTTAGAGTTTTAAATCTATAAATTTTCATGAGCAATTGTTTAGAGATTCATTGTGT
            ACCCTGAACTTAATAATGCGTAGATATTGTGTTTTAAAACCATTTTCTGTAATTATATGAATTTATTTCGCCAGGTTTCT
            TTATTGATGAAATATAAGTTTAATTACTAAATTAGACCATATTTTCTCTCAGTGCCCATATATGCCTGCACCAGTGTGTG
            CTCGTAATTTGGTTGCCTTTCACAAAAGACACTTGACGTGGCCAAGATGCAGACAGACACACAAGACACATCGACGTCGG
            CGTTGACAACGGACATGGCACATGATACGTGGCTCTTTGGGCTATTGGTTGTTGCTTTCGTTGTTGGTTGGCTGCATGTT
            GTTGCTTTGGTTGCTGCCATGGTTGTTGCTGCCGACAGTTGGTCATCATCGGTCCGTATGTGCTGTGCATTTTTTACGAG
            CATTTGCCTCGCTTTTGTGGCCGCAGATGCGCTGAGCTACATAAATTTTGTGGCCCGGCGAAAGGCAAAAATTAAAATGC
            GCTTATAAAGCAATAAAATGCAGCATAATAGTAATAGCGGCAGCGGCGTAATGGCCACGTAATGAAAATGTCTACGATTT
            TGAGAGATGTGCGAGTTGAAAGATACAGTACAGTGCAACATGGGATGCAGCTGTGGACATTGTGCAACGTACACATAACG
            TATCTCTGCTCGATGCAGATTGCAACAGAGAGTGCCGAAAAAAGAAACTAAATGAAAATGAAAAAAAAAAAAAACAAAAC
            AATTATAGAATGTATCTCGCAGATTGCCGACTGCAGATTGGATTGTGGCCGAGCACCGAGAGTTATGGCACTGGCATTCT
            ATGTTCGCCGGCCCTGTCAACGGCAATTTGCCATAACATAAAACTGCACGTTTACACTAATAGCACAGGTATCTAAAGCG
            CTCAGCAGGTGAGCTCCAGCTCCACTAGCCGAGTGTCGCGATATCTTGGTATCTGAGTACTCGAGTATCTGGGTATTCGA
            GTACCATGGGGCTATCTGCATCGGTATCTGAAGTTGGACTGGTCGTCGCCATGGCCAGGCCTTCACTTTTTCGCTGCCCG
            GCGCTTGATTAAAGTTCAATGCATATGAATTAATTAAGTTTTTTACTGCCTCCTTTTTTTCTTTTTTTTGTATATTTATT
            CCTTTCGCGCTCGCAAAGCTTATCGGTAACGCTCGAGCCGGGCACATCCATCATCCCATCCAGTTTTTCAGTGCCAATTC
            CAGTTTTCTGGCCCAATGTGGGCAGTTCTTCCTCAGTAAAACTGGCACAGAAGAAAAAAAAAGCCAATGGAAACTGGACA
            AATGAGCGACAAAACTGGTGCAACACTTCAGCCACAACATCCTAACCAATAACAATTAAAAACGATAAACAAAAGGGGAA
            ACCGTTAACTAAAAGAATATTAATAGCTGTGTTTAATTCGAATTTCTTCATCATAAATTCATATTTTACTGCAACTACAA
            ATTAATAGTTAATGATTTTATTTAGCGAGCAAGAAACGTGTTTCTGAATGACCAGCAATAAAGTTTAAAAAGAACTATCT
            TTGTTACCTAAAATATATGCATATTGCTTTCATATGCCTCATATGAGCTTCTTTAATCCCCACTGCATCACAATTTCGTG
            GCACGTTTGCTGCCCCCTTGCCTTGGGGGCGTGGCACACTGGCCGCCGTCTGGGCGTGTATGCAACTTGATACATTTTAA
            TTTGGTTGCTTTAATTAATTTTTTTTTCGCTCAGTTATTTAGTTGAGATTTTTTCGCCCAGATATGGTATTTTGGTGGTT
            TAATTAATTCTTTGCTAAGTGAGAAATTGCCTGGCTAGCAGTGGGTGGGAGGTTGGCCATGCCCGTTGGCATCAATCAAA
            GTGATTGTTGAAATGGATTTCAAACATGTCAGTTCAGTCAGTGGGCAGTGCTGGCTGCAATCTGACTGCAATAAAGTGTA
            CACTTTAAAATGTCAGAAATAAAAGAACTCATATGCGTGTATCAATATAGTTTCTCGTGCTCATTAAGCACGACTTATTG
            GTATAACCTCTCACCATTTAAACAGCTCATAAACCAAGCGGCTAATCAAGATCACTGATCATTAGGCGAGGCAAATGTCA
            ACACTTCAAGCCCGGCGATAAAAGTGTCAATCCAAGGCTCATATAAACCTCAAGCCCAGCAGTTCGTCAGTTAAAGTCAG
            TCGTATAGTGTCGATCCTGCAGATGCATCCGAAAGTTTGCCAGCCAGCCAGACATTCGGTGCGATTTATGTGCGAGTTTT
            GTTTGCTCTGTCTTGGCTTTTCGTATGCAAACTGTCAATCAAAGACGGCAGCACCGGCAGCGATGCTAATCAGCCCAGAC
            TTTGGCAGTTTATGTACTGGCCGGGACAAAGTTATGGCGCCGTTATGGCCCACGAGGAACAGAAGCAGCTGCCACCAATT
            TTGGGTGGGAGAGAGGGGGCACAAGGGGCCATCACTGGAAAAAAAAGGTGCAGCATAAAAATACTTATGGAACAAAACAA
            GCATTTGATTTTCATTTAAATATGTTTAAATGGGTTAAATTCATTTGGTTAAAGCTTGAAATACTTTAAATCCTACAAAC
            TGTAACATGTTCTTATGTTGTATTTTTAGGATCGAACATTTTGCATAATTTGGCTGCCTTCTGCAGGTGTCACTTTTTGC
            GACAGTGAAGCTTTCGCCATGGCGGTCTGGTCTCGTGACATCCCAGGGAGCACATATTGAATATCTGCTGTGTTGGCTCA
            GCGGGCGGCTAAACATTTGCTCGGCTACCTTAGACCAAAAGCTGAACACAGAGCCAAAGCCAAAGCCAAAGCCAAAACCA
            AATTGATTTACGTCGCTGGCAGACAAATGGCAGAGGGGCCAGGGAATTAACAGTCAAATCTGAAATGGCAGCAACTAAAT
            GCAAATCATGGTGGTTACCGCTGCAGAGCGAACGTATCCAGCAGATACTTAGTGCTTGGATACTTGGTAAGTCGACTACA
            GATACAAATACGAATACGTTTACAACATGACTGGGCTGGCAATCAAATGCATTTATTTTGCATATAATTCAAATGATAAT
            TTGTGTGCAGTCAAGTGCTTTTGTTGTTGCCAGCTTGCAGTTGTGGTGGGCGTTAAAGAGTCGCCTTCTCGAAATGTCAA
            CTTGTGTAGTTCTGTCAGATAAATCAATCAAGTCGATTAGTTTTTCAGCATTGCAGGCGGTAATTAGCGTGTGGGGTGTG
            ACACTCTCGATATAGGAACAAGTATCTAATGCGGGTGGAAAAATCTCCAAGGTTAATTCAGCCATTGAAATTAACTTAAT
            TTGAGTTTCCCATCGGTTCGAGTGCAAATCAAATAAATGCCACAGTCTGAACATATATGCGGTATTTGTATCTGTATCTG
            GGGAATACCCATACTTTTTTGCGGCTAATGCATTAGCCTAAGTATCTACAACTTTACTTACAATCCCTTTTTTGCATTAC
            TTTTTTCGACAGAGAAACGAAGACGGCGCCAGCTAATGTGCAAACATAAAATTTTAAGACGCCGCCGAAAGGAAAGCCAA
            CGGATAAGAAGGATGGGCAAGTCGAAGAGTCTGGCAGACTCTTTTGGGGACTTTGATATTTGCCGAAAGTATTGGCAGCC
            AATTTCATTATTGAGCCCAGCCAATATCCAATATCTGGCAAACATAATCCGTTTATGACTCTAATTGCAGCTTAGCACTG
            ACAAGTCAAACACACCGAAAAAGTGACAGATAAGTAGACACTTCAAGTGCAGTGTAATCAATTGAACTGTGACCATCGAA
            CGAAAAAAACCGAAGTCTTTTTACCATCAGCGAGGTATAGAGTTCCTACGTTCCTATATTCAGTCGTAGGAACTTAATAC
            CGTGCTCTTGGAGGACTGTCGACCAGCATATAGTTAAAAGACAACTTGAAATTGAAGTAATAAAGTGAATTATTTAATAT
            AAATATATAAATATATTCAGTTTGAAGTTTACCTAGACATAATATGTATAAGAAAGATAAACCAGAGTTAGATCGTCTAT
            AGAACGTCTTTCATAAATTTGACTTAACCAAAAGCAACTTAATTAGAACTAATATATTTAACTACATTTGAAAGTGAATC
            TTGTGAGCATCTTGCAGTATCGAATGATCTCGAATATTTGCCCCTTCAATCCACAGACAAAATGTATCAAATATTTATTT
            AACCCCTAACAGTAAAAGTTATAAAAGGGGTTGAGATCGGATCGCGTCGGACACTTTCCTCAAAGATATAAGACCGTTTC
            GGATATCCCGCGACCCGAGGAGTTCATCAACCTTTGGATGCATCTTAGAGATACGCACTCAGCAAGGACCTTCAACCCTT
            TTTCGTCCTATCGCTGCCTTTCTATCTTGATCCTGGCATTTGCATGGTCGCGTTTAATTGCGAAAATTGTGCAAGGACGA
            GCAGCCGTTACGCAATTGATAACGGTTCATTTGTTTTTGCGGATTTTATATCTATTTGATTAACGGTAAAGGCTGGCTAC
            AGGATACAGGATACCGCAACGGAAAACTAAGGGATAATGTGTGCAAAATTAAATGAAGCATTACATTATGAATATACAGC
            GGCACATGTTATGTAATAGCG
            
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            FBtr0347129
            7735
            Comments

            Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

            Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

            External Crossreferences and Linkouts ( 2 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
            Synonyms and Secondary IDs (2)
            Reported As
            Symbol Synonym
            CR46004-RA
            lncRNA:CR46004-RA
            Secondary FlyBase IDs
              References (0)