FB2026_02 , released June 18, 2026
Transcript: Dmel\lncRNA:flam-RI
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General Information
Symbol
Dmel\lncRNA:flam-RI
Species
D. melanogaster
Annotation Symbol
CR46037-RI
FlyBase ID
FBtr0347468
Feature type
ncRNA
Associated gene
Dmel\lncRNA:flam
Evidence Rank
Length (nt)
611
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            Sequence Downloader
            AGTTGCTTTATGACGCCGGGCGCGTGCGCATTTAAAACAATTCTCGAAAGAAATGTTCACAAATTAGTTTAAATTCGAAA
ACGTTTCGGTATGGACGCAAGAAAAAGGAATTCTAAGAAATAGAAATTCTAAGCGAAACAACAACGAAAAAGGAAAATAA
TTTAAATAGGGATAATAATATACAAAAACATAACAACAAAAACACAACGGTATTAAGGAATCTGTTTCAGAATTTCAGTG
AGTTAAATCTGTTAAAAAGTTCTGCGGTTAATTTGTTTGTTTCTTTAACAAAAAACGTAATCTAATATTTTAATTATTAT
CATCAGCTCAGCAGCAGTGTAGAATATATTGGCCTAAAATACTAGATATTTTATGTTAATATATTAAATTCGAGTGACTT
ACGTCACCCAAGATTTTGTACATTTTCAAGCGAGCATTGGACTGGGTGTTAATTATTTCTATGCCGGTTTGCTGCAAGTA
TTTGTTGTCATTGATCAATTAGCTTCCTAGCTTTCAAGCGAACGGTCGTGTTTTTTTTTTGCGCTCCGATTCCTATTTTG
TGTTTGTCAAACCAGCCAAGTATCATGCTCTCCATTTCCTATGTCCTGTAG
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            lncRNA:flam-RA
            FBtr0347221
            1028
            lncRNA:flam-RB
            FBtr0347222
            935
            lncRNA:flam-RC
            FBtr0347223
            917
            lncRNA:flam-RD
            FBtr0347224
            673
            lncRNA:flam-RE
            FBtr0347225
            1186
            lncRNA:flam-RF
            FBtr0347226
            1324
            lncRNA:flam-RG
            FBtr0347227
            682
            lncRNA:flam-RH
            FBtr0347467
            748
            lncRNA:flam-RJ
            FBtr0347469
            571
            lncRNA:flam-RK
            FBtr0479729
            6976
            lncRNA:flam-RL
            FBtr0479730
            7536
            lncRNA:flam-RM
            FBtr0479731
            9458
            lncRNA:flam-RN
            FBtr0479732
            13313
            lncRNA:flam-RO
            FBtr0479733
            6966
            lncRNA:flam-RP
            FBtr0479734
            8347
            Comments

            Transcript structure supported by data, primarily 5' RACE, from FBrf0224576.

            Unconventional splice site invoked (GT-AT); within a dynamic region of nested TEs that may differ in different strains; this splice may not occur in vivo.

            Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

            transcript_exception: non_canonical_splice_site (invoked due to sequence_alteration)

            External Crossreferences and Linkouts ( 2 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
            Synonyms and Secondary IDs (2)
            Reported As
            Symbol Synonym
            flam-RI
            lncRNA:flam-RI
            Secondary FlyBase IDs
              References (0)