FB2026_02 , released June 18, 2026
Transcript: Dmel\PGRP-LC-RJ
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General Information
Symbol
Dmel\PGRP-LC-RJ
Species
D. melanogaster
Annotation Symbol
CG4432-RJ
FlyBase ID
FBtr0472540
Feature type
mRNA
Associated gene
Dmel\PGRP-LC
Evidence Rank
Length (nt)
1192
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            Sequence Downloader
            GTGCGGCTTAAATACTTGCTAAATGAAAAAGTGAAAAACAAGAACAGTTCCTGCATACTATGTGCGCGGATCGGGAAAAG
TACCCAACGATCGGTTTCAGTTGTTCATATAAAGCGATCGGAGAATGTCGAGGAACACGCTTGAAATTTGCCTAAAGTGT
CACGGGATAATCGTAGATAATGACAGGCGTATCGAGTGTGATAATGTTTATTGTGGTCGGTCCTGTCATCGCAAATGCAC
GGAATTGTCCGAGGATCAGTTGAAATTGCTGGAAATGGTGCCCAATTTAAGGTGGAAATGTGACAACTGTCTGAATGGGG
TGCAAATTGGAGCACAAATGAGCAAGTGGTTGGAAAAGTCACTGCGGGAACATGAAAAACGATTGGAAATCCTAGAACAG
GGGCTAGTGAAGCGCTCCAAACACGAAGATCCGGCGCAAACCCCACCAATTTGTCCTTTTCTGCCCAACACTGTCGGACG
CAAGGCCGTCACAGTTACAGTGGTTTTTGTAACTTTAACCTTCCTGCTGGGTATCGTACTGGCCACCACCACAAATCTCT
TCGGAAAGACGTTGAACCAAACGAATGATCCTGAAATCCATGTGGATGGAAAACTAGTTGTGGTCAGTATAAAAGGCTGG
GGTGGTATGCCTACTAGAGGAAACCTAAAGCCATTTAAACTTCCGGTCTCCAAGGTAATTATCTCTGAGACTCCACCCGA
GATATGTACGACACAGGATTCCTGTTCTTATTGGACTCGAGTAACCCAAAGCAGGCACATGGATACCTTCAACTGGAGTC
AAGTGGGATATAATTTTCTTGTGGGCGGAGATGGACGTATTTACGAGGGGCGTGGCTGGAACTACATGGGCGATCATACG
AGGGACAATAATAACAACAGTATCGGTATTACATTTTTGGGAACATTTCGACGACAGGAGCCGACGCCAAAATCATTAGA
GGCATGTCAGCTGCTCATCGCTCAAGGTGTTCGCCTCAAGAAACTAAAGCCAGATTACCAACTGCTGGGACATCGGCAAA
TCACAGGCACTTTGATGCCCGGCGAGGAACTCTATAGAATCATTCAAACCTGGAATAACTGGTACAATCTGACGAAAACT
TGGCCCGATCTGCATATGACTCAATAGTTATAATTAATACAATCAAGAACGAATAAAGGTGTTCAAAAAATG
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            PGRP-LC-RA
            FBtr0089490
            1876
            PGRP-LC-RB
            FBtr0089491
            2039
            PGRP-LC-RC
            FBtr0089492
            2579
            PGRP-LC-RD
            FBtr0300290
            1781
            PGRP-LC-RE
            FBtr0300291
            1172
            PGRP-LC-RG
            FBtr0301773
            1928
            PGRP-LC-RH
            FBtr0308349
            1935
            PGRP-LC-RI
            FBtr0346814
            1982
            PGRP-LC-RK
            FBtr0472541
            1278
            Polypeptides
            Derived from THIS transcript
            Name
            FlyBase ID
            Length (aa)
            PGRP-LC-PJ
            FBpp0422538
            340
            Derived from OTHER transcripts
            Name
            FlyBase ID
            Length (aa)
            PGRP-LC-PA
            FBpp0088491
            500
            PGRP-LC-PB
            FBpp0088492
            520
            PGRP-LC-PC
            FBpp0088998
            511
            PGRP-LC-PD
            FBpp0289518
            500
            PGRP-LC-PE
            FBpp0289519
            329
            PGRP-LC-PG
            FBpp0290987
            345
            PGRP-LC-PH
            FBpp0300668
            520
            PGRP-LC-PI
            FBpp0312389
            501
            PGRP-LC-PK
            FBpp0422539
            330
            Comments

            Isoform rPGRP-LCy (FBrf0233515), supported by RT-PCR and functional studies.

            Transcript terminates at site supported by polyadenylated cDNA.

            5' UTR based on RNA-Seq data.

            External Crossreferences and Linkouts ( 1 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            Synonyms and Secondary IDs (1)
            Reported As
            Symbol Synonym
            PGRP-LC-RJ
            Secondary FlyBase IDs
              References (0)