FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\hpRNA:CR46342-RA
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General Information
Symbol
Dmel\hpRNA:CR46342-RA
Species
D. melanogaster
Annotation Symbol
CR46342-RA
FlyBase ID
FBtr0472837
Feature type
Associated gene
Evidence Rank
Length (nt)
6457
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 17 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GCAGGACGAGTGCAAACTGCGCGGAACCACGGGTGGCAGGGTGCAGCTAATCCTAGTCAGCGGCCTGCCTCTGGCTGGAC
          AATCTCAGAATCTGATGCTGGCGGGCAACGAGTTTACGGCACGTATTGTGCAGCAAAGAGAAGCCGGAATTGCAGCTGCA
          ACCGCAGCCGGAGCCGGAACCGGTACTCCATCGACAGGAGCAACCCCACTCAAAATCAACGTACTTGGCGGATCTCAGGG
          CAATAGCAATAAAATGCGTGCTATATTCAATAGCGCCAGCAGCATTCAGCATGAGAACGGCGTGACCACCATTGTGCCAG
          CCTCCTCGTTGGCAGCCAGCAATCAAACAGCTGCCATGAACGCAATTGCGCCGAGCACGGTGACTATAACGCCGTCATCG
          GTGGGCAAAAAGGTGACGGTGCCAAATCCCAAGTTTATCCTGCTGAAGCCAGCCAAATTTGTGGGACCAGCATCGGCAAA
          CGAGGTAAACACAGCGACTCTGACGGCGGAACCACATGCTCCTCCCCCTCCACAAGCCAAAATCGTATAGGCGATTGAAA
          ACGAAAGAGAGAGAGATAGATAGGAGATGTCTAGCGTCTCGCAGGGAATATAGTAACCACCCTGTTACGTTTGTTATACA
          CTAAGCTATTTAACGGCGACCGAAAGCCAAGCTCCCTTCCTTAGCCGCAGGTTCCATATCATTCAAGAGTAATATTTAAC
          ATTTCAAGGAACACCTTAGCCTAGACGTTACTTTAGCCTAGACTAGAGCACTGAACTACAGTATGGGCGAATGAGTCCAC
          GCAAAACTCACACCCACACAGAGCCATACAAATTGTAACAATTATTAGTGTGTTAATTGTTTAATGTAGCGCCCCGGTAG
          CCTGTAGTTTGACTCCAACAAGTTCGCTCCTGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGC
          TGGCTTTGATTTTCCAGCGTCAGTCAAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAA
          GAACAGAATGGGGAATGAGTCCACGCAAAACACACACCCACACACACACAGAACCATACAAATTGTAACCATTATTTGAG
          TGTTAATTGTTGACTGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCTGGCGCTTCACAGGCGCTGG
          AAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCAGTCAAGCGGAAGGAGGGACTTGTTTGAG
          TCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTCCACGCAAAACACACACCCACACACACACA
          GAACCATACAAATTGTAACCATTATTTGAGTGTTAATTGTTGACTGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACA
          AGTTCGCTCCTGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGT
          CAGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGT
          CCACGCAAAACACACACCCACACACACACAGAACCATACAAATTGTAACCATTATTTGAGTGTTAATTGTTGACTGTAGC
          GCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCTGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAG
          TCACTTCCGCTGGCTTTGATTTTCCAGCGTCAGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGG
          GGGCCCTTAAGAACAGAATGGGGAATGAGTCCACGCAAAACACACACCCACACACACACAGAACCATACAAATTGTAACC
          ATTATTTGAGTGTTAATTGTTGACTGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCTGGCGCTTCA
          CAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCAGTCAAGCGGAAGGAGGGA
          CTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTCCACGCAAAACACACACCCA
          CACACACACAGAACCATACAAATTGTAACCATTATTTGAGTGTTAATTGTTGACTGTAGCGCCCTGGTAGCCTGTAGTTT
          GACTCCAACAAGTTCGCTCCTGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGAT
          TTTCCAGCGTCAGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATG
          GGGAATGAGTCCACGCAAAACACACACCCACACACACACAGAACCATACAAATTGTAACCATTATTTGAGTGTTATTTGT
          TGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAA
          CCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACA
          GGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTCCACGCAAAACACACACCCACACACACACAGAACCATACA
          AATTGTAACCATTATTTGAGTGTTAATTGTTGACTGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCC
          TGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCAGTCGAGCG
          GAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTTGTTCTGCGT
          GGACTCAAACACCCACACACATACACAAACACAGAGCCATACAAATTGTAACCATTATTAGTGTGTTAATTATTGAATGT
          AGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGG
          AAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACT
          GGGGGGCCCTTAAGAACAGAATGGGGAATGAGTTGTTCTGCGTGGACTCAAACACCCACACACATACACAAACACAGAGC
          CATACAAATTGTAACCATTATTAGTGTGTTAATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTT
          CGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGT
          CGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTTGTT
          CTGCGTGGACTCAAACACCCACACACATACACAAACACAGAGCCATACAAATTGTAACCATTATTAGTGTGTTAATTATT
          GAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAAC
          CGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAG
          GATACTGGGGGGCCCTTAAGAACAGAATGGGGAATAAGTTGTTCTGCGTGGACTCAAACACCCACACACACACACAAACA
          CAGAGCCATACAAATTGTAACCATTATTAGTGTGTTAATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAA
          CAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGC
          GTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATAA
          GTTGTTCTGCGTGGACTCAAACACCCACACACACACACAAACACAGAGCCATACAAATTGTAACCATTATTAGTGTGTTA
          ATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAAT
          CTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAA
          CTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTTGTTCTGCGTGGACTCAAACACCCACACACACACA
          CAAACACAGAGCCATACAAATTGTAACCATTATTAGTGTGTTAATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGA
          CTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTT
          TCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGG
          GAATGAGTTGTTCTGCGTGGACTCAAACACCCACACACACACACAAACACAGAGCCATACAAATTGTAACCATTATTAGT
          GTGTTAATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTG
          GAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGA
          GTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTCCACGCAAAACACACACCCACACACACAC
          AGAACCATACAAATTGTAACCATTATTTGAGTGTTAATTGTTGACTGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAAC
          AAGTTCGCTCCTGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCG
          TCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAG
          TCCACGCAAAACACACACCCACACACACACAGAACCATACAAATTGTAACCATTATTTGAGTGTTATTTGTTGAATGTAG
          CGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAA
          GTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGG
          GGGGCCCTTAAGAACAGAATGGGGAATGAGTTGTTCTGCGTGGACTCAAACACCCACACACATACACAAACACAGAGCCA
          TACAAATTGTAACCATTATTAGTGTGTTAATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCG
          CTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCG
          AGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATAAGTTGTTCT
          GCGTGGACTCAAACACCCACACACACACACAAACACAGAGCCATACAAATTGTAACCATTATTAGTGTGTTAATTATTGA
          ATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACAAGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCG
          CCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGTCTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGA
          TACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGTTGTTCTGCGTGGACTCAAACACCCACACACACACACAAACACA
          GAGCCATACAAATTGTAACCATTATTAGTGTGTTAATTATTGAATGTAGCGCCCTGGTAGCCTGTAGTTTGACTCCAACA
          AGTTCGCTCCCGGCGCTTCACAGGCGCTGGAAAATCTTAACCGCCGGAAGTCACTTCCGCTGGCTTTGATTTTCCAGCGT
          CTGTCGAGCGGAAGGAGGGACTTGTTTGAGTCCAACTACAGGATACTGGGGGGCCCTTAAGAACAGAATGGGGAATGAGT
          TGTTCTGCGTGGACTCAAACACCCACACACACACACAAACACAGAACCATACAAATTGTAGCCTTACAAACAGAAACAAT
          TATTTATGTGTTAAGAGAACATGTTTTTGTAAAGACTAAATACAAATGAATAAATTT
          
          Other Products of this Gene
          Other Transcripts
          Comments

          Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 2 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CR46342-RA
          hpRNA:CR46342-RA
          Secondary FlyBase IDs
            References (0)