FB2026_03 , released September 17, 2026
Transcript: Dmel\hpRNA:LINR-1-RD
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General Information
Symbol
Dmel\hpRNA:LINR-1-RD
Species
D. melanogaster
Annotation Symbol
CR32205-RD
FlyBase ID
FBtr0472918
Feature type
Associated gene
Evidence Rank
Length (nt)
3145
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 14 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      ACCATCATTTTTGACATACATTTGTAAATTTATTTCGTCAAGTGATCACATGTTGATAATTTAGATGAGGACCTGCGCAG
      CAGCAGAGGCGCAGCTGATTGGAGCGGAGTTGGCCAAACGCGAAGGGTAGGCAAAAGGAAGCAATCTCAGAAGCAGCATC
      GATACCATTGCTGTTCCTGGCGATAACCTGGCTACTGGTGGCGGTCACAACTGGAGCGGGAGCAGCTACCACGGCAGCAG
      GAGCAGAGTAGGCCAGAGGAGCAGAGTAAGCCAGAGGACCAGTGTACGCCAGGGCAGCACACAGGACTCCAGGCTTGGCA
      GCAGCGCAGGCGACGGTTATCAGGACAAGGACGGCCTGTAAACAAATCAGCTTGATTAGTTTAATCCTCTATGGATCCTT
      TCTGAAGAACTTTATGTGATTTCCCACTGCTGACTGCAGAATGTGGAATAACTCTTGGTGGCCACGGAATGCGATGGCCT
      GAGATCACAGGCGCAGTCCCGATGCGGCGCATAAATAGTGGTATGGAATGTGTTGGGCGACATCAGGTTCAAGTTTTCGA
      ACCGAAAGCACCAGATCCATAATCCAAATGTTTAAATCCGACGTCCTTGTCTTGGCCATCGTCTCCTGCTCTGCTGCCAA
      GCCTGGACTGCTTTGGACTACACTGCTCACGTGGTTCCTCTGCTTCACTCCGGTCTGACTGTCGTGGTAGCTGCTCTCGC
      TCCAGTTGTGACCGCTGCCAGTTATCAGGTTATCGCCAGGAACTACAATGTAATTGCTCTTGCTCCTGTGATTGCTCCTG
      TGATTGCTCCCGTGGCTTTTCTCTGGCTGTGCCTCTCTTGGCCCAGTACGCAGCCGCTCCTCTGGCTGCTCCATGACCTA
      CTCCTCGCCTTTGGCTTACTCCGCACCACTGAGCTACGCCGTTCCATTTACACAGCTCCCTATCTAAATTACTAAGCTGT
      GATCACCTCGGAGACAATGATAATAAATGGAGATATAATAAGACGTTATTCAATTGTATATTCTTTTGCAAACACGCTTC
      AAATTAGTATTTATTTTAATGAAAAATTATATCTGAACGTACACGAAGATGATTCCTAGATAATTTCCCAGCATTTATGA
      ACAATTATTCCGAGAATGCACACTAGCGCCACCTAACGACTGATACATTTCTTAATCACAGCCCTATAATCTGTTGAATC
      TAACTACAAAATATCCGAACTTCTGAGCTTTGAAGATCCCCAGATCTTAGACGGTCATAGATCCCAATTAATTTCTTTTT
      TGTGCGAAAGCACTTCATTCAACGTTTTACATAATTTTTATAGAATCCAATAAGGCCTTTTAAAACGTTTCTACTGCTCC
      AACTGTATATGTACATGCTGCTTGGGCCTAATAATTAACCTTGCTGATAACCCTCATCAAATCACCAAACTGCCGTCCAC
      ACAATTCCATGGTGCTCCATTATCAAATCCCTGTTGGATGTCCGGTGCCTGAATCAACACAATTCAAAAGCCCACCCAGA
      AGTCGAAACCCGTTTTCGGCACCATCGTTCATTCATCATCGCCGCCTGGCACTTGGCAAATTTACACAAGCCAGGTAAAC
      GGATAGACAGAAGGACGGAGCCAGCCAGAGCCGAAATACAATTAAAACCCAATCTAAACTCAAATTTTAAATCACAAAAG
      TTATCAGTTACCTTTCGGCCAACAGCAGAAGCAGCAGCAGTAGCAGCCGCACGTAAACTTTGGTCAGAATCTGTAAGTTT
      GCAGCTGAATCTTGGTCAAAAGATACGGCTACGACTCCCATACACACGCACCTTTGGCAAACACACTCAATTATAGATAC
      AGACAGACAGTGAGACCCACAAACTTCCGTGGAAAACTTCTCGGGCACTTTGAAAATGAAGCGAATCCTGGCCAGACAGA
      CGGGCCGTTTCCCAAGTTCGATTTCTGGCATTTGCTGTGCTCGGCAAAATGCATTTGCCATTCCAAACTAGTTCCAATTG
      ATTAAGTTTCTGGTTAATGGATTGTTTACATACCTAAGCAGGCCGACTCACAGAAGTGCAACTCTGCAACTTTTGGCAAT
      CACCACTAAATGGTAATCACAAATTCACTGCCTGACTTAGTCTTCTATTGGGCCAAAAAGCAAAATACAGTTGAGCATTG
      GAAATTCCACAAGTTATTTAAGTGGCAAATGGTCAAATCACATTATATTTTACTGCACTTTATTATGATGGTTCTATAAG
      TTTTGACGTTTATTTATAACTAAGCCAATAGAATCGGTAGCAGAATTGGGTTAAATCCAAAGTAGAGGCCAAATGCACCA
      AATCTATTTCGTAAGCCTACTACTGTACTGTACTATACTTTAAAACATTTATCCTCCTTGTTTTTCCGAGTGCCCACTAA
      AAAATGCATAATTATTTTCCTTTATGCCATAAAGCAGATTAAAAAACTTTTGTTTTTAATTAGAAGAAGCGCTGTTTCGG
      GCAACAAAAGAAGGCATGGAACTTGCGAGTAACTTTGCAAACATTTCATTGCGCGCATATAAATTACATGGAGAAAGAAA
      AGCGTGAAAAGCGCGAAAAGCAAGCAACATTCTTGCCAAAAACGATATGAAATAAAACCAGATGAAAATCAAAATTAATG
      CAAAGCTCTCTTCCAGCAGACAATGCGGCGTATGCGCAATGAGCTCTGCAATTCTTGGCAAAATTACGCATACGCCCCCT
      TCGCCGAAGTGCGAGCGCACTGCGGGCTGCCTTTAAGTTGCGCCAGGGAATGTGAATTAATTTCGTTTTAATTAAGTTCC
      CATAAGTTTATTAAATTTAACAAGCAGGCCCCAGAAACACATACACAACCACCAAGCTCGCTGCGACAAAAGGACCAAGA
      ACTATGTGCGGGAACAAGATGACAACTACGACTCCTGGCCTGGCACACAAAACGTTTCAAAATTAATTAACAACTTATTT
      GCATTTTGACGGTTCTCGAATGGATGTCGCCGTAACACGATAAAGAAGTCCTCATCATGTTGGAAAACCTTTGACACAAA
      TTAAACTTGAGCTTGGGCTTATAAGATTTAAGTTCACTGAGATCGATCTTCCGGGGAAAATTCTTATTTCTCACTTGTGT
      TAATAATATTGGCTCTTAATTTAAG
      
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      FBtr0075000
      1085
      FBtr0472919
      1291
      Comments

      Unconventional splice site invoked (TT-AG); sequence altered due to transposon insertion; this splice unlikely to occur in vivo.

      Extended 3' end based on RNA-Seq and/or EST data.

      External Crossreferences and Linkouts ( 2 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
      Synonyms and Secondary IDs (3)
      Reported As
      Symbol Synonym
      CR32205-RD
      hpRNA:CR32205-RD
      hpRNA:LINR-1-RD
      Secondary FlyBase IDs
        References (0)