FB2026_03 , released September 17, 2026
Transcript: Dmel\5-HT1A-RC
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General Information
Symbol
Dmel\5-HT1A-RC
Species
D. melanogaster
Annotation Symbol
CG16720-RC
FlyBase ID
FBtr0474126
Feature type
mRNA
Associated gene
Dmel\5-HT1A
Evidence Rank
Length (nt)
5019
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 2 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CATCAGTTTGTCGATGGCACAGCGCGCAACTGGACGTACATTCGCATCTTGGCAATGGCATCAGCTCACTGGCCAAGCGA
CTGACTCGCGTTTGCCACTTCTGCCCATTTTGGCCCTGTGTGTGTGTGTGTGTAGGCCCAATCAGTATCAGTAATCAGTG
TCCGTGTGCGGCGTTGGATGGTGGTGCCTGTGTGTGTGTTTGTGTTGGCCAACTTTAAACGCTCTTATCAGCGCGCGTGT
GAAGCATGAGCTTGGTGCTAACAAAGTTTTGGCGGCATTTTCAATTAATGCCAATGCCAGCAAAAGCAGCGAAAAATTCA
CAAAAAATACCAGAGAATAGAGAAAAATTGATTTCAGCGCGATAAAAAAAAAACTTTTAAATATACAATGCAGACACCAG
AAGGCAATCGGATGTGAAATTTACTTCAAGGATATGAAAATAGCCATCAAATGGGCCATAAACACACGACAGCAAACGGA
AGAGCTTAAATAAACCAAAATGAGTACAAAACATCAGTAGCAACAAAGCCAAGTCGGCAACAATCAACATAACAAAAGCA
ACACTGCCACACAGAGAAATCTAAAGAAAACATAAAAAAAGAGCACAAATAAGAGGAAGTCGGAAAGAAAAGTGAAAGCC
AAAAGCCGAAATTGTAAACGCTCCATGTAAACACTTGAAAGCTCGTTAGGATAATACATCCTGCCCGGCACCGAGCACAC
GCTGGAACAAAAAAAGGACCACCGAGGAGAAAGTGGGGAAAGTACGGCAAATAGGGAAAGCAGGGAAAGCCGGGAAAGTA
GGGAAAGTGTCACCATGTCCCGTCCCGCGTGTCTGAGTGGCCGCCAGTTGAAACAACGGCACCATCGCAAATGCCCACCC
ACCCACACAGACACACACATGCGTCAGGAGGCCATTGCCATTGCTGTTGCCGTTACCGTTACCGTTACCGTTCCCGTTGC
ATAGTCGCGCTTCCGTTTCCGTCTACTCCTCATTTCCGCTGCGGCTGCAATTAAGCGAAGCGAAGCATCCAAAAAAACAC
ACCGAGTATCCACAAAATGGCGCACGAGACCAGCTTTAATGATGCGCTTGACTACATTTACATAGCGAACAGCATGAATG
ACAGGGCCTTTCTGATAGCCGAACCGCATCCCGAACAGCCGAATGTAGATGGTCAGGACCAGGACGACGCGGAGCTGGAG
GAACTGGACGACATGGCGGTCACGGACGATGGACAGCTGGAGGATACCAATAACAACAACAACAGCAAGCGCTACTACAG
CTCCGGTAAAAGACGAGCGGATTTCATAGGCTCCCTGGCGCTGAAGCCACCGCCCACCGATGTGAACACCACCACCACCA
CCGCCGGCTCACCACTGGCCACCGCCGCTTTGGCAGCGGCAGCCGCCAGTGCCTCGGTGGCGGCAGCGGCTGCCAGGATC
ACCGCCAAGGCGGCACACAGGGCACTGACCACCAAGCAGGATGCCACATCCTCGCCAGCATCCTCTCCAGCCCTCCAACT
GATCGACATGGACAATAACTACACGAATGTCGCAGTCGGACTGGGTGCCATGCTGCTAAATGACACGCTCCTCCTCGAAG
GCAACGATTCCAGTTTGTTCGGCGAGATGCTTGCCAACCGGAGTGGCCAACTGGATCTGATCAACGGCACTGGCGGCCTC
AATGTGACCACCAGCAAAGTGGCCGAGGACGACTTTACGCAGCTGCTGCGAATGGCCGTCACATCGGTGCTGCTCGGTCT
AATGATACTGGTCACCATAATTGGCAATGTCTTTGTCATAGCGGCCATTATCCTGGAGCGGAATCTACAAAACGTGGCCA
ACTACCTGGTGGCCTCATTGGCAGTGGCCGATCTCTTCGTGGCCTGCCTAGTAATGCCCCTAGGAGCTGTATACGAGATC
AGCCAAGGCTGGATACTTGGTCCGGAATTGTGCGATATCTGGACGTCGTGCGATGTCCTCTGCTGCACTGCCTCGATTTT
GCATCTGGTGGCCATTGCCGTCGATCGTTACTGGGCGGTCACCAATATAGATTACATCCACTCGCGGACCAGCAATCGTG
TCTTTATGATGATCTTTTGCGTTTGGACGGCGGCGGTGATTGTGTCCTTGGCACCACAGTTCGGTTGGAAGGATCCAGAC
TATCTGCAGCGTATCGAGCAGCAAAAGTGCATGGTCTCGCAGGATGTTTCTTATCAGGTATTTGCCACCTGTTGCACATT
TTACGTGCCACTGCTGGTCATCCTGGCGTTGTACTGGAAAATCTATCAAACGGCCCGCAAACGCATCCATCGTCGACGAC
CGCGACCCGTCGATGCGGCGGTCAATAATAATCAGCCGGACGGAGGTGCGGCAACAGATACGAAACTTCATCGACTGCGT
CTACGCCTCGGCAGATTCTCCACGGCCAAATCCAAAACCGGAAGTGCCGTGGGCGTCTCAGGACCCGCATCCGGAGGCAG
GGCTCTGGGCCTCGTCGATGGCAACTCAACGAACACGGTCAACACCGTCGAGGACACCGAGTTCAGCAGCTCGAATGTGG
ACAGCAAAAGTCGGGCAGGCGTCGAGGCACCCAGCACTTCTGGCAACCAGATAGCCACCGTATCGCACCTGGTTGCGCTG
GCCAAGCAGCAGGGCAAGTCCACCGCCAAATCCTCAGCCGCTGTCAACGGAATGGCCCCATCGGGCAGGCAAGAGGACGA
TGGCCAGCGACCAGAACACGGGGAGCAGGAGGATCGCGAGGAGCTAGAGGACCAGGACGAGCAGGTTGGCCCGCAGCCCA
CAACCGCAACATCAGCAATGACAGCGGCAGGCACCAACGAGTCGGAGGACCAATGCAAGGCCAACGGGGTGGAGGTCCTG
GAGGATCCGCAGTTGCAACAGCAGCTCGAACAAGTGCAGCAGCTGCAGAAATCGGTTAAATCCGGCGGTGGAGGTGGGGC
CAGTACGTCAAATGCCACCACAATTACGTCGATATCAGCGCTATCGCCACAAACGCCAACATCGCAGGGAGTTGGAATCG
CCGCCGCCGCCGCTGGACCGATGACGGCCAAAACCAGCACGCTGACGAGCTGCAACCAGTCGCATCCGCTATGCGGCACC
GCCAACGAATCCCCATCGACACCAGAGCCACGTAGCCGACAACCGACGACCCCGCAGCAGCAGCCGCATCAGCAGGCGCA
CCAGCAGCAGCAGCAGCAGCAGCAACTCTCCAGCATCGCCAATCCGATGCAGAAGGTGAACAAGCGAAAGGAGACCCTGG
AGGCCAAAAGGGAACGGAAGGCGGCCAAGACGCTGGCCATCATTACCGGCGCCTTCGTCGTCTGCTGGCTGCCCTTCTTC
GTCATGGCACTGACCATGCCGCTCTGTGCCGCCTGCCAGATCAGCGATTCCGTTGCCTCGCTCTTCCTTTGGCTGGGCTA
CTTCAACTCCACCCTCAATCCGGTTATTTACACCATCTTCAGTCCGGAGTTCCGACAGGCCTTCAAGCGCATCCTCTTCG
GCGGCCACCGACCAGTCCACTACCGCAGCGGGAAGCTCTAGATAGTGCATGCGAAGAGGCGAAGACGCTTCTGCTAAACC
GACCAGCGGATGTTGATCTAACCTCTTCGGCTATAACCAGGATAACGAGGATTAACGCATCTTGTATACCAAAGACGATG
AAATCAAGGACGACGCAGGATCAAGGATGCAGTCGAGCAGTCGCATAACCAATAGTTGTTAAGTGTGTAAATAGCAGATT
GAATTGATGTTAACCTATGCAAAATATATTGTGTTAGATATAGCTAAATTTATAGAGCCAAGTGGAGACTGTTTTTAGAA
GCAAACAAAAAAAGTTGAATTGTGAGGAGATGCCACCAAGGAAATACAAAAGTATCTAATCAAAATAACTAGAGATAAGC
CACCACTACCGCATAGTTGACATAACGAGCAATCTACTACCAATTTCTATGTGTTTTCCAACTTAACGTGAATTGTATAA
CTCATAACCGTGTTAGGCGCTAGACTCTATCTCTCTTCTCTGCTTCAGAAAAATTGGAAAATGGAAAATGGAAAAAGGGA
AGTGGGAAATAGGAAATGGGAAATGGGAATCAAGGCATTGGAATCGTTATAACTGAAGCGAGTACTCGATTATGTATAGC
CCAGCTAGAGACATTTAATAAGCATATTGCATCGTAGTGTTAAGAACATTTGTTGAGCATCGTACTAAACTGTAATATTG
CATATAGGATCTATAAAATATCGAACCGGTGGAAGCCAGTTTAAATTTAATTTAAACGTATTGTTAAAAGCCACAACTAG
GTAAATTACATTTAAAACTGTTGTACTATTACTATTATGTGTTAGATTGGTAATTATGTGTCGAGGATTTCTTTGAATAA
GCTGGCATATTACGTAACATATAAGCAAACAGTTCGAATGACATGTAATATTTGAAGAGCAAACTACTTTCGGGAAAAAT
GGGTAAAACGTAATTAGCTAAAACAAACAAAAACGTTAGAACATACACTGCATAATGACATACATAACATATATGTATTT
ATATGTTAGTTTAGACTAGACGGGTATCACGATGTTTTACCTAAATAAAACTACCAAGCGAACTATTCGAAAACCAAAAT
CAAAACTTTACGAAAACTTTAAGCCGACATCATTAACTAGCGACTAAGTGTTTGCAGATCTGTCTATCTTTAAAAACCAA
TAGAAAATAAGGCAAATCGCCAATGGCAGCATACTTCGCAATAATTCGAAAGGACACCCACACATATTTCTAGCTTAAAA
TTGCCAAAGGCGGTTTCTTTTATTTATTGTCACTTAATTTTTTTTGTACATTTGGTTCAAACAAATTGGCGCGCATTTTT
TAAAGAATTATTGCTGGGTATGCGTGCCGATTTTCCGGGAATTTCGCTAAACAAACAGCATAAGTTAAACTAATGAGATT
ACTATAAAATTCATTGGCTGCAATTTAAATAAAAATTCAACTTTCATGCAAAAAAGAAG
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          5-HT1A-RB
          FBtr0086577
          5019
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          5-HT1A-PC
          FBpp0423127
          846
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          5-HT1A-PB
          FBpp0085761
          834
          Comments

          Stop-codon suppression (UAG) postulated; reflected in aa sequence of predicted polypeptide.

          translation_exception: stop_codon_readthrough

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          5-HT1A-RC
          Secondary FlyBase IDs
            References (0)