FB2026_03 , released September 17, 2026
Transcript: Dmel\Scr-RF
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General Information
Symbol
Dmel\Scr-RF
Species
D. melanogaster
Annotation Symbol
CG1030-RF
FlyBase ID
FBtr0479791
Feature type
mRNA
Associated gene
Dmel\Scr
Evidence Rank
Length (nt)
4140
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 14 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CAGTCAAAGTGAGACATTGGCGCTTCGAGCACGTATCCGCGGATACACCGGAATAACAGAAAAAAAAGCACAAATAAAAA
AACTCAAACAATCCAACACTCAGCTGTTCCGCGTGTAAAGACCCTCGAATACTGTTCGATTTTAGCGAAAGATGGATGGA
CTGCAAAGTGCTTGCATCGATGCTGGCGCTGATGGACAGTCATAAATTCGGCGTGAAATTCGCGCAGATACTTAGATACT
CCGTCATAGCGCATATACTTATCGTGATCTGTAACAAATTGCGCGTGTGCTTGTGTGTTTGTGATACCAAAAGCCGTCCA
AATCCGTCGCTTAGCCCTTTGCGGCCAATTACCCATTAGAACCATCCAAAACATAAGCCTGCAGGTAGGACGCAAAAGTC
TAGCCAGTTTGCCCTCAGGATGCCATCGGATTAATTTCCCAGATATCCGGCTGGTTGTGACAATTCTACCTTCGTAATTG
TGCACGTTGATTTCCGCACTCAGCACAAGTGAAAATCGTGGTTCAGTGCAGTGAAAATCAGAAAACAAACTCACTTGAAC
GGAGGTGAACGCCGTCGGCTAACTAAAATTACTCCAATCCACGACAACGACCCCTGGCTTTAAAATGGATCCCGACTGTT
TTGCGATGTCCTCGTACCAGTTCGTCAACTCGCTGGCCTCCTGTTATCCGCAGCAGATGAATCCGCAGCAGAATCACCCG
GGAGCGGGAAATTCGAGTGCAGGCGGCAGCGGTGGAGGGGCGGGCGGTAGCGGGGGCGTGGTGCCCAGCGGCGGAACGAA
CGGCGGTCAGGGCAGTGCGGGGGCGGCCACTCCGGGGGCGAACGACTACTTCCCAGCCGCGGCGGCCTATACGCCTAACC
TGTATCCAAACACACCGCAGGCCCACTACGCCAATCAGGCGGCCTACGGCGGACAGGGAAATCCGGATATGGTGGACTAC
ACGCAGCTACAGCCGCAGCGACTGCTCCTGCAGCAGCAGCAGCAACAGCAACAGCAGCAACATGCCCATGCAGCGGCAGC
AGTTGCTGCCCAGCAGCAGCAGCAACTCGCCCAGCAGCAACACCCGCAACAGCAGCAACAGCAGCAGCAGGCGAACATCA
GTTGCAAGTACGCCAACGATCCAGTGACGCCGGGCGGAAGTGGGGGCGGGGGTGTTTCCGGTAGCAACAACAATAACAAT
AGCGCCAACAGCAACAACAACAACAGCCAGTCGCTAGCCAGTCCACAGGATCTGTCCACCAGGGACATATCGCCCAAACT
GTCGCCCAGCTCAGTGGTAGAGAGTGTGGCCCGATCGCTGAACAAGGGCGTCCTGGGCGGAAGCTTGGCGGCCGCCGCTG
CCGCCGCCGGCTTGAACAACAACCACAGCGGATCGGGAGTGTCCGGAGGACCTGGAAACGTCAATGTTCCCATGCACAGT
CCGGGGGGCGGGGATTCGGACTCCGAGAGCGATAGCGGCAATGAGGCGGGCAGTAGCCAGAACAGCGGCAATGGAAAGAA
GAACCCGCCGCAGATATATCCGTGGATGAAGCGAGTACATCTCGGGACGAGTACTGTGAATGCCAATGGCGAGACGAAAC
GACAACGGACCTCATACACCCGCTACCAGACGCTGGAGCTGGAGAAGGAGTTCCACTTCAACCGCTACCTGACCCGCCGC
CGCAGAATCGAGATCGCGCATGCCCTGTGTCTCACGGAGCGGCAGATCAAGATCTGGTTCCAGAACCGGCGCATGAAGTG
GAAGAAGGAGCACAAGATGGCCTCGATGAACATCGTACCCTACCACATGGGTCCATATGGCCACCCGTACCACCAGTTCG
ATATCCATCCGTCGCAGTTCGCGCACCTAAGCGCATAGGACGCGTGGCACTTTTCGGGTACTGGTTAGAGACTCAATCAG
TTGTATCAGGAACCATATCAGACGGCGGCGGCGGCATCGGCGGCCAGTGGTTATCAGTCGCAGGACGGCGGTCCAATTGG
TGGCGGCTCGGTGGGAGTGGGTGGTGGTGCGGGGGGGCCGGGCTCGCTGGCCAACGGTGGCAGCAATGGCAGCGGTCCCA
ACTCTCTCTTCGCCTCCGCCGCCTCCAGCTCCCAGGCTCCCGACTGCATCAAGTATCCGCAGGAGTTCTGATCTCAGGTT
ATCATCAGGCAGCAGCATCAGCAGCAGCAGGATAACTCCATGGATCGGAATCAGGAGCGGGACCTAAAACTGCTTTTGGA
AACGGACTGTGAGCCCGATCCAGAGCTGCAACTGGAGTTCAAGGCGGACATTGTCGAATGCAACTTGTTCTGCTGCTGAG
CTATGTCCGCCTGCCACGCCCCTGCCGCCTCATGCCTGCCGCCTACCGCCCATCGCCTACCGCCTGTCGCCGCCCGTCGA
TCAACCAACATCCATAGATGTTTCTTGTTTGCAACTGATTCGTGTTAAGCTAAGAAACGAGCCATATCCGCATGGTTCGT
TTGGGTTTATGATACTGGAGATGGAACCACGAGCAATCGACGTCACTCTTTAAGATATTAATCATCAACCTTTAACTAGA
ATTTGTGATACGCTGAGTCTAACATATCATGATCATATTATTCACGTCGATTTGAATCAATGACATTAGTATGTGATGTT
AGTTTGCTGTTGAATGATATGTATATGATTGATATTACTTGATAATGTCAAAGTTAGGTGTTATCCCTCACTCACTTTCT
AAACCTTTCTATGCGAATGCTCGAGGGTCCTTCCAGTATGATGAATCTCTTTCTCTAAGCAGTATTCGAAAAGCCGTTAG
TTTGTAAGCCTAGCATAATTTTAGCACGTAAGCTGCACGATGAGCAGACAAAGCTGTCGAGTTGAACAAATCTAATATCT
GCAATAATTTCAAAGTGATTTCTAATTAACATTAGGTCTTCGTTTGTATCGCCCAATCTCCAACCTTGATCCCAACCAAA
CCCCCAACCAGCACCCTCCAGGGAGTCCTAAAGAGTGTACTTAATTCCTAGCTAGTAGAGAATATAACTCTAGTTACCCA
CATAAGGCTTTGTTTAGTTTGTAAATAGCAGAGCGCCCCAGATCGGGGATCGCCTTTTTATGTTTGTGTTTCGTCTTGAA
GAGAAAATTTGAAAGTATCTGCAACTGTTTAATTCAATTTATTTTGAGTGTTTGCGTTTATGTTGTTGAAATTGCTCTAG
CAGCTTGGAAAATGCTTTACTAATTTTATCAAAAATCAATCGTTTTTTATTGCCACTGAAGAACAAATTCGGAAGATAAA
CAGGAAGTAAAATAATTCAAAAATAGCATAGACCTTGCTATAGTTAATCAGAGTTTTCTTTAGAACATCAGCCGATCCTT
CCTCTTTATTTATTCAAAGGCCTCTCAACAATGTCTGTAAATTTAATTCGGTAGTTAATCGATACAGTGTAAGCCAACGA
AATTTGATTAAAGTGTGAATCGTTAAAGCCTAAAGCTAAAGGAAACCCATAACCGTAATGTAAAGTAATTATTTATGCTG
TACTTTTCGCTAAGCTAAGGTTAGTGCATTCTAGAACTATCGGTAGTATATGTCAACCTAGATCGTAAGCCTAAATTATG
TATATCGAATTAGCAAGACAAATTTTAGAGAAAACAAATCAGATTGAGCAAGGCAAAGCAAAACGAACAAAACTATGGAA
ATGAGAGAATCAAAAAAAGTATACCTAGCACAAATTAATTAATCGTTTTTTGTTTCCCCATTTTGTATATTTGTTCAATC
TTAGTTTGTACATTTTCGATTGTGTGTTCAATGCAATTGGTCGGAACCATACTGATTTTCGCAATCAATTTAAATAAAAA
ACCATTTGAAGTTTTGGGTTAAGGGGCACTCACAGTCCGCCAGGACAAAGTGGGCGCAAAATGTTTAACTGCATTCCATG
TAAAATAAAATTACGCGACTAATTTTTAATGAAATTCGCATGTATGTATACCTTAATCTCGGTTCGATTGCCATGGCAAT
TATTAAACAAAAAATGGAATCGAAAACGAAAACAGATAGAACTTCAAGTATAAAACCACAAAACCATACAAATATAAAAA
ATAAAAAGTATGTAAACATGTATGAATATGGCATAAAAAATAAAAACTATTTTAAACTGT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Scr-RA
        FBtr0081657
        4140
        Scr-RB
        FBtr0081658
        2585
        Scr-RD
        FBtr0474171
        4140
        Scr-RE
        FBtr0474172
        4140
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Scr-PF
        FBpp0428124
        564
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Scr-PA
        FBpp0081163
        417
        Scr-PB
        FBpp0089393
        417
        Scr-PD
        FBpp0423170
        508
        Scr-PE
        FBpp0423171
        427
        Comments

        Transcriptional initiation site is supported by short-capped RNA data (FBrf0209722).

        Extended 3' UTR based on RNA-Seq and/or EST data.

        translation_exception: stop_codon_readthrough

        Triple stop-codon suppression (UAG,UAG, UGA) postulated (FBrf0243886), FlyBase analysis; reflected in aa sequence of predicted polypeptide.

        External Crossreferences and Linkouts ( 2 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Linkouts
        Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Scr-RF
        Secondary FlyBase IDs
          References (0)