FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\CG42340-RE
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General Information
Symbol
Dmel\CG42340-RE
Species
D. melanogaster
Annotation Symbol
CG42340-RE
FlyBase ID
FBtr0479806
Feature type
mRNA
Associated gene
Dmel\CG42340
Evidence Rank
Length (nt)
5085
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 13 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTTGTTTACCAAATTTGAAGCTCTACGGTTGATCCGCGCATGAAAGGGCGCCATAAAACAATAAATAACTTGAAGAGAC
GAATCCGCGAAACGTTTAACAGTTATCATAATATCCAGCCTATTGGCGTAGTTCGCTGCGCCGACTGTGTTATTAACTAC
GCTGTTTGTTTTTGTTTTTTGCAAGTGCTTTTGAGTGCCGAAGTTAAAAAAAAAGTCCGTGCGTAAGCCAGCGCCAGTTC
AATCCGCCCGCTTGCGTGAAGGACCCAGTTTTAGCCATGGCCCAAACAGAGGCCAAAACCACGTGCACGCGGCGTCGCCG
CCAGTTTTTGCCCCATGGCCAAAATAGGCAGCAGCAGCTGCAGCAGAAGCGGCAACAACAACATTGTTAGCGGTTTCCAC
TCAAAAATATACCGTGTGCTACATAATGCCGTTAGATATTTGTAACGGCTTAGATCGCATACCGTTAATCGTGGATTGTG
GCACTAACTGAACTGGTCGTACGATTGTTGTGATTATCCTTGCTGCGGATCCCGACTATTAAAAGTGGGGATAAGCATTG
GCAACAGTTGGCAATTCGTAAGCAGTCATCAGATTAAACCATCACAGTTTTCGAAGGACTCATTACAGTTGAATTCAGCA
TCCGGCGCGACAGGCTGTCTCATTTCCACATCCACGCTCACATTCAGCCAACTGAGGGCTAAAAAGGAGAAAATAAAGGG
AGAGAACGAAAAAAAAAAACAACAAGCGACAGGCTCGTAAAAGGGCGCTGCTGTACAGCAATAAGAACATTTTATGACGG
TCACATAATAAGATCGAAAAAGGCCCCGCCCACTTTTGCACAAACCGAAGGCGCAGAGGAGGATGCAAATTACGTGGCAC
ATGAAGCGTCAAAGCGTTTGATTTGATTGTCAGCGGCAGAAGTGTGAGAAGTGAAGCGAAGTGAAGTGAAGGGAAGCGAA
TCGTTTACCGCGCGAGTTTACACCTCCAACGGACCGACTGGCACCAATTGATTGATTGATTGACAGATTGGCCAGGGGTC
GGAGGTTAGAGGTCAGTGGCAGAGGCAGAGGCAGCGGCAGAAGCAGCGGCAGCAGCACAATGAACAAGAAGTCGCCACTG
CCGTTGGCGGCATTTCTCGGCGGCGACGGCAGCGGCGGCAGCGGAAACTGTGCCGCCAGCGGTAGCAGCAATGTTGCAGC
AACTGCAGCATCGGCGGCTGCGAATGGTTCCGGCGGACGTGTCGGCGGTCGGCAGACGTCGACGGGCGGCTCGTCGAGCG
GCGGCGGGGGATCCAAGTCGGAGAAGCAGGCGGCACGGGAGGCGGGCGGCGGCGGAGGCAGTTTATGCGGTTGCCAAAAG
GCGCCCAAGTCACACTGCATATCAGCAACAGGCGTACTTTTGTTGGTGCTGCTCTACACGGCCATGGGTTCCATTGTATT
CGTGACCCTCGAGGGCGAATTGGAGGATGGTGGCGCCCTAGAAACCGCTGTGGCCGCTTCTAAGCCATATCCCCGCACCG
AACTGGCCAACGCGGAGATACGATCCAGAACTGTGGATCGTTTGTGGTCGATAACGGAGGACCTGAATATATTGTATAAG
GAGAATTGGACGCGACTCGCCGCACAGGAGGTGCAGCTATTTCAGGACACTTTGCTGCGGGCGGTGCGACAGTCGAAGGT
TTATCCCCCCGGGGGAATCCAGTTGAATGCGCCCACACACAAATGGACCTACGCCTCGGCCTTTCTCTACTCCCTGACAT
TAATTACAACGATAGGCTATGGCGGCATCTCACCGCGAACGCAGTGGGGCCGAGTGGCGGCCTTGGTGTACGCCCTGTTC
GGGATTCCCATCGTGCTGCTCTACCTATCCGCCATGGGCGAAGCGCTCTCGGCGGGAATGCGCTGCCTGTTTCGGCGCCA
GCGTGTGAAGGGCGGACCTGGTGGCGGTCCCGGTGGTGGCGCCTCCGGTGGAGTGGGCTCGGGCGCTGGTGGAAGCGGTG
GCGGCCGAAAGACGGACAAGAATAAGGGCCAGGGGCACTATGGCCACCAGAAGCTGCATCAGTACGGCCTGCCTCCGTCG
GTGTACCAGCAGCAGCAGGCGCAGCAAGCGCAACAGGCGCAGCAACAGCAGGCGCAGCAAGCGCAGCAGGCGCAGCAACA
GCAGGTGCAGCAGGGCAAGAAATCCTCGGGCAATCGCCGTGGCTCACCCAGTGTTCCCATCTCCATCTGCGTGTGTGTGC
TGCTCTGCTATGTGAGCAGTGGTGCGATTCTGTTTCACAAATTGCAGAACTGGAGTGTCCTGGAATCGCTCTACTTTTGC
TTCACCTCGCTGGGAACCATTGGATTCGGTGAGATGGCGCCCAATGGTGCAGTGGCTCTCTACACGGCCTCCGCGTACAT
TCTGGTTGGCATGGCCGTGGTGGCCATGTGCTTCAGCCTCATCCAGACGGAGATCGTACTGTGGCTGCGCCGGTTCAGCG
TTCAGGATCACGTGATGCCCAAGGCCGAGGAACTGGCTCTAGTCACCGTGGCAGTTACGCCGAAACCCTCCTGACAGAGA
CCTAGTGCGGATCCCAGTCTGGGCGTCGGATTGGGAGTGGGTCTGGCCGGCGGCGCTCTGGGGCAGCCGCAGAACAATCT
CGGCCAGCACCAGACCATGTTCTTTGGACCCGCCCACACGCTGACGCAGTACAGTTCGCTGCCGCGCAGGAGTCACCTGC
AGGCGGCCAACAATTCCGGCGGAGGATCGGCCTTCCAGCGGAATACGCCCATCCGCAGATCGACGGGCATACCGGAGCAT
CATCTGGAGTACTTTGTGCCGCGTAGCATCAGTGAGTTCAATCTGTCGGGAGTGGGCGATCTCGCCCTGCCGCCACCACG
TCGATACTCACCCAATATGGTTGGTGGTGGTGGTGGAATGGGCGGCATGGGCATGAATATGGGTGGCATGGGCATGAACA
TGGGCATGGGCATGGGTCTGCCACATGGCCTCCAGTTGGGTCCACCACAGACGCTGCTCTGCTCGGCCGCGCCCACTGTG
CAGCAGCAACAGCAGCCGCCTCCGCCGCCGGCACAACTGCAGATTGTCACCCTAAAGCCGCGCAGCGAGAAGATGGTGAC
CTTTGAGGATGAGTCAAAGCAGGCGGTGGGCGGTGGAGCAGTTGGCGGAGTAGCTGGTGGCTCCGGAACGCCACCGCATT
GTCCACACGGTGTGCCGACGACTCCGCGAAAATCGCCAGCCGTGGGCGATATATTCATGTGACCAGGAGCGCAGAACGAG
GCGGCCCAGGTGGATGCAGCAATGCGATTGCGTGACAGCATCGATGATGCACTGTGTCCAAAAGCTGGACCGGCGCCAGG
TGAAGTGATACGTGTCTAGAAAATCAAAGGAACATTCTCACTCACTCACACATACGCACACACACACACACACACACAAC
AACAACAACACACTGTAAGTAAATGCACACACACACAAACGCGTATGAAACCAACTTTTCCTAGGCAAAAGGGAGTGGAA
CAAAAAACATTGCCTACTTTTGAGGGCCACTGCTCTCAACTTGAAGTTCATTGTGTTTTTTCAGCATATACATAAGTATA
AATAAAACATAGAGCAAATATTTAATGTTATGTGTGTAAATATAGCATACAAAAACCACAAAGGAGGCAACTAACTAAAG
TTGAGTCGCATTTTTGCGACAGAACGAGAGAGAGTGAATTAAAATTAAAATTCTAAATGATAAATGCATAAATAATTGAA
TGCTGCGTGAGGGCGTTTTACGGTTAATACCGTGGAACACGGATCCAGGAATTAATAAATACACTCAACCACACACACAT
ACACATGAACACGCACACACACTATGAATAATAAATAGTGCGTGGGCGTGGCATTAGGGGGCGGGCAAGTAGAGCAAACA
AAATGCAAATGAAAATGACAAATTGTATAAATACCAAAGGACAAAGTTTATTTAAGCGATTTGTTAGTTAGTTGCTCCTG
CTCTCTCAGTTCATTTTTTTTTTTTTGTCGTTTTTTGTTTCGCCGTTTCTGGTCGGAAAATTTCAATTAGTTTTATTTGC
TGTTTCGCAGGGCAAATATGTATAAATTTCCGGAAGGCATTTTTTTTTCTATTTGCAAAATGCTGATGGTTTTATTTCCA
GCAATGCCAAATGTTATTTAAACTGTGCCAAGTAAAATCGAAATCTTTTCTAGAAAATATAGTAACATTGTTTTTTTTTT
AACAATAAATGGGGTAGTACTGTACTGTAAAGTAATTTTCCCATTTCCCACTGTCTTACAAACTGTGAAACGGTGCCAAG
TTAAATGTAAAAATGTAACCAATAAAATAGCAAATATGTTTTTAATGCAAAATCGCATTTTTACCAATCGAACTGTTGAA
TGTACTCATAGTGAATAAGATTCAAAGTGTTATGTGTGTATATGAGTGTAAGATAAATGTGTATGGGGAACCGGGGAATC
GAAAGTATTATCAAAATTGATTGTTAAGCTGATTGTTTAATCCGACTAAATGCCACGTATAAGCGATCAACGAATTACCA
GCGATTTATTCAAAAACTTTGGTGTCATTTAGCTTGAGTATTTTTAGCCGCCATTTTGCCATCCGTTTTGGCAAAACTCG
TAATTTCCAAACCGCCCACTGGCAATTAGGTTTAAATACTTTTTAAATGCATTTTGATTGTAGGTAATTGAGCGCGTGAA
TGGCCATTTGTTGTTTGTTTCTGTTGGTTTTTGGCCTTGTTTTCAGTTGCCTGTTCTCTGCTGACCGTTTTCTGTTTGGT
GTTGCTGTTTTCCACTGACAGGACATCCAATTGGAGGGCTGTCAAGCGAGCGGAGCTCATTTGAGAGCGTTTTTTTTTTT
TTTTTGTGTTGTTGCTTTCGCTGCTTTGCGGCAATTCATTTAAAATAAATTCAATTTGAGCGACCGCCAACGCCCACCGA
ATGGGCGTGGCTGGCCGCCTGGTTGCATTTGTTAATTTTTGCCATATTCAATTTGTGGCATTCAATTAAAATAGTGAAAT
TAAACCAGATAGGATAGTCATCGCTCGTAAAACACATAGCAAGCC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        CG42340-RB
        FBtr0331297
        5085
        CG42340-RC
        FBtr0299863
        5725
        CG42340-RD
        FBtr0332386
        4614
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        CG42340-PE
        FBpp0428139
        759
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        CG42340-PB
        FBpp0303729
        720
        CG42340-PC
        FBpp0289141
        484
        CG42340-PD
        FBpp0304660
        484
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        translation_exception: stop_codon_readthrough

        Double stop-codon suppression (UGA,UGA) postulated (FBrf0243886), FlyBase analysis; reflected in aa sequence of predicted polypeptide.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CG42340-RE
        Secondary FlyBase IDs
          References (0)