FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\jp-RF
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General Information
Symbol
Dmel\jp-RF
Species
D. melanogaster
Annotation Symbol
CG4405-RF
FlyBase ID
FBtr0479942
Feature type
mRNA
Associated gene
Dmel\jp
Evidence Rank
Length (nt)
5935
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 42 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TCAGTGTGAAACGAACCAACAACTCAAACGAAACGAACGCAAACGCGCGCGCGAGAAAAACAAACTAGAATAGAATAGAA
GAAATTAACCTCTCCGCCGAAAAGGGAAAACCCCCAAAAAATATATAAAATAACACACGAAACGCTGAGGTCGGGGGCCC
TAACCCAATGCTAACTGTAAACAATAATCGAACAAACGAATTTTTAAATTAACAGCGAATGAGTAATACCTGAGCGATTT
ATTAATCAGAAGCCGTGCGAGCAACAAAGAATCCACAAGTAGCTGGCCCACGGATAGATAAATAACTGCACAGATAATTG
CTGGTACACGGTACTGGGCTCTATAAATAGCATCGAAATAATCGCGGAGACAATTGCAGGGCACTGGTGCAAAGTGAATG
CGACTGAGTGCTGCCGGGCGGAACGCCGAGGATCTACTAAGATTACTCATCGCAAAATTCCTACGGCTCCAGTTGGAAAA
CACATGGCCCCTGCTTAAAAATGGGAAAAACCCAGAAACCATAATCAAAAGTGACAACAAAAACCAAAGACAGAGACAAA
ACCATGAAGACACTGAAAGTGCTTTTCGTGGCATTCGCCTGCTACTATGCACTTTTCGTAATTTTCTACTATTGCTATCG
GGCATACCTCTAAACATATAAGTACATCTTCGTGTATATACATATATAATATAAATATATATGCCAGCGAAACAGCTGAG
TCGAGCAGAGCTAACCACCACCCACCCACTCGAGAGGTGGTCTGCCATTGAGAATTTCGGCCTTTGACGTGGCTCGTGCA
CACACCAAAATCCCCCATATTATACGGTCTATATGCGATGATAGAATCGCTTGCTGCCAGCGCCAGGCGAAATAAAAACG
AAACTCGCTGAGAGCGGCTGAATAAACCGCAATCGAATGCAATTACATCGTATCCATAATGCATCGTCACCTCACATCGT
CATCCTCTCGCCCTCGTTTTTTCTCCAAGATCACTCGCCGACTTTTTTTTTTGGTAAATGACCAAGAATGGCCTACGACA
TTAGCATAGAGAATCATAACCGCAACTGTCAGAGGACATTGACATCGGACGATCGGTTTATGCAACTTTGAAATCGAGTC
GGGAAACTCAAAGGAGAGCAACGACAAATTGCAACTTTCGCGTTTCAGTGAAAAATCCAACAATTTAACCACACAACACA
CACACACAGACATACACACACATTAAATAGCCCTAAAGCACCACTAGGTTAAGCAGAGCTAACGAAACCAAGCGAAACGA
ACTATTAGACATTAGATCACAACCAGGATCAGATGAGGCAACAGCCGGTGCAGCAATCGAGCGGAAAATCAATGAGCAGC
AGGCGGCGTCACAAAAAGCCCAAGGCAACAACAACAGTATCCACATTTTTGAACCGCCCCGAACTTTAGAAACCCCCCAA
GTCTCGAGCATGCAACAGGCTGGCCAACTGACGCCGCAGCAGCAACAGCAACAGCAGCAACAGCTACTGCAGCAGCAGCA
GCAGCAAAATGGCGGCGACCTTGCCGCCTACGCCGCCTCCCAGGCGGCCGGCGGTAGGCGTGGCCCCATAAACGGTGGTC
GCTTCGATTTCGAGGACGGCGGCACCTACTGCGGCGGTTGGGACGAAGGCAAGGCCCATGGCCATGGCGTCTGCACGGGT
CCCAAGCACCAGGGCGCCTACGCCGGAGCCTGGAACTATGGCTTCGAGGTGTCCGGATCGTACATCTGGCCCAGCGGATC
ACACTACGAGGGTCAGTGGCAGAATGGACGCCGACATGGACTGGGCGTGGAGCAGATCGGCCGGCAGATCTACCGCGGTG
AATGGTCGAAGGACGGGCACAAGGGACGCTACGGAGTGCGGGAGAGCACTGTGTCGACGGCCAAGTACGAGGGCACCTGG
AATGAGGGCTACCAGGATGGGTCCGGATGCGAGACCTACGCGGACGGCGGAAAATACCAGGGTCAGTGGCAGGAGGGCAA
GCGACATGGATACGGAATTCGCACCTCGGCGCCCTTCGGATTGGCCTCGCATCACCGCCGCAAGAACCTCCACGCCTCCC
TCAGTTCACTGCGGAGTGGTGAGAACGGAAATGCGGCCAAGATGGTGGAGAAGGCGGAGGAGATTCGCGGTGGATTCGTT
CTGACGGCCAAGTCCGATAAGCTGCCGGTCCGGCGCAACAGTTTGACGGACAAGACGGGCAAAAAGGGATTTCTGATGAA
CCTCAAGATGCGCAAGCAGCGCAGCACGGGTGATCTGGAAAAGCGGGGTACCATTGCATCCGGCAGCATAAGATCCACCA
TGTCCTCGGCCTCCTGGATCAGCACTGGATCCGAGCAGTCCAATCTGACCACAAAATCCAATCACACCGAGTCCAATGCT
AGCTTCACCATGGAGGACGAACAGCTGGATCCCACGGTGGTGGAGACATACATGGGTGAGTGGAAGAAGGACAAGCGCTG
TGGTCACGGCGTGGCGGAGCGCAGCGATGGACTCAAGTACGAGGGCGAGTGGTACAACAACCGGAAGCACGGTTACGGAG
TGACTACTTTCCGCGACGGTACCGTCGAGGAGGGCAAGTACAAGAACAACATCCTGATCACCAGCCAGAAGAAGAAGCAT
TTGTTCCTGGCGCGTTCGCGCAAACTCCGCGACCGAATTGCGGCCGCTTTGAGCTCAGCGCAGCGTGCCCTCAAGATGGC
GATGCAGCGCTCCGACATGGCCATTTCCCGCATGGCCACCGCGGCGGCGAAGGCCCAGAATGCGGACGCCGCCGCCGAGC
AGGCTCGTATGGATTGCGAGAATGCGGTGCGAATGGCTAGGGAATTTGCGCCCGATTTCAAGCCTTCGGTGCTGGAGCGA
TTCGAGAAGCTGCGCTTCAGGGAGCGGGAGCGATTCCGTCCGGGACCAGCGGCCGCATCCGATGCATCCGTAAAAATGGG
CGTGGGCTTGCAGACGCAACAGCAGCAGCAGCAGCAGGGTCAGTTCTCTCCTACGAGCAGCAGCGGCTCGGATGCCTATG
CCACGCAGGCACAGCGCCAGCAGCAATATCTTAACATGCAGCAGCAACAGCAGCAGCAGCGTCGCATGTCGCAGCAGAAA
CATGAGTCGGAATGCCCGGTGCCACCTTCGATGTACTCGCAACAGTTGCCCGTCTCGCCGCAGACGGATCTGTCCGGCAT
GGTGAGCCAGGCCCAGCCCAGCCACGCCCAGGTGATCAGCGCCATCAATCAGATGTACCACCAGCAGCAGCACCAGCAGC
AGCAACAGTTGAACCAGCAACAGAGCAATCCGCAAATGAATCCTGCATATCAGTTCCAGCAGCAGCAGCCGCCCGGTCAG
GCCAAGATCAATCCCAATCTTAACGCGAACCTCAAGCAGAACCAGGCACCGAATCAGAACCAGACACAGATGCCATTTGG
CTCTGGCACCAATCAAGTGACCGTCTCCCCACAGCAACAGCAACTGCTGCAGCAGCAACAGCAACAGCAGCAGCAGCAGC
TTCTGCAGCAACAACAGCTGCAACAGCAACAGCAACTGCAGCAGCAACATCAGGGTCTCCAGCAGCAGCCCTCGCTCCAC
GCCTCGCCCACCCACAATGCCTCGAATCTGCTGCGTCGCGCCTCCCAGATGCAACAGCAGCAGATCCAGGAGACGGCCGC
CGCCGCTGCGATGGCCGCCAATGCCGCCGCCATGGCCGCTGCCCAGCAGCAACAGCGCAGCGGCAGACCGCCCATGTTGG
GCCAAATGGGTCAGCAGTCGTCCATCGATCACTTCGATCATTACAAGCGGCCGCCCAGCCGCGACTCCTCCATCGATCGG
TACGCCCGGGCGGCCAGTCGCTTGAGCGGTGCCTTTGCCGGATCGCGACAAGCATCCCTCGACCGATCGGGAATCGCCGA
TCCGGTGACCAATGGCGGCACAAGCACACCCGATGGACGCCCCCGGGCGGGCTCAGTATTCCGCGGATCCACCCCGCAAC
CTGGAGCCGGAACATCGACCATGACTGGCAACGGATCGCTGCCGTCGGGCAACGGCGGCGGACGACTGTCGCGAGCCGGA
ACACCCAGCCTGGGAGCCGGAGGACGGGCGCCCAGCCAGGGCAAGACGGAGCCGCTCTTTTCGTCGCCCAATCAGCCGTT
CGAGGACGTGCTGCTGCGCCAGCGGACGCTCGGCCAGGACATCATTCCCTCGCCCTCGCAGCCCAAGCGCACGGAGAGTC
TCTATCTGCCGGCTAAGCCAGCCACGCCGGTGGGCATGGCCATGGGCGGAAAAGGAGGCGGCGGTGGAGGCGGCAAGAAA
ATGAAGTCGGTGCCCATCAATGTGACGCTGCAGCGAAAGAAGTCCATGCCCGATTTCCAGGAACTGCCGCGAGCCACGGA
GGCCATGAGCCGGGAGGAGGTGTCCGCCTTGGGTTCCGCCCGACGGGAGGCAGTGCGTCGCCAGATCGAGGTCAACGAGC
GGCTCAAGGCAAATCCCTTGCTGTATTTGGTCAGTCCACAGGTTAAGGACTGGTTTGTGCGCCAGCAGCTGATGCTGCTC
GTCCTGATTTTCAACGTGGCGTTGGCGCTTCTATTTGTCTACATGCTCACCTAGCGCCGGAGGATGCACAGGACGACGCG
GAACAGGGACGGATTCGGATTGGGTGACTCGGGGCAGCGACTGGCTTTGAGCCACAGTGCGTTTGGCAGCCACCGATAGT
TCGGGATTCGCCGTTGGACCTGGGAATTTTATGGTCATATTGGATGGCCCACAACCAGTGTCGTGGTGAGGGCTAATAAG
TTTTTAGCATTTGCAGTGATGAGTTGATATAAAGCAGAACTTATATAAGTATCTAAAGTACCATAAATGTATATCATATG
TTTAACATGAGGAAACACGCTAGAGATGGGAAAAAGAAATCGAATTACAAGTCTAGACTGCAGCCAAATAATGGATAATT
AAATTAACTAAATAGCGCAGAACTGCAATGCACAAATCGTAGCAAAACTAAATACATACTTAAATCGCGTGGCTGTGCAG
CCAATCATTTAATTTGTCGAGCCAATTAAACTTTGTATTTGTGGCTAACCAGGTGAGCTGGAGGTGAGATCGAATAACTA
TATGCAAATCAATTTAACGAATTTTTCTACACATTTAATGTAAAGATAAAGGCAAAATGAAACAAAAAGAGAAACAAACA
ACAACAACTTAACCTAATCAATGTTTAATCATGATAAATAAACGCGTAATATATTTAATCTACGGCTACTTAATGTAATA
CATAATACGAAAGCAAAACTAGGCAAATGCAAGGCATCCAAAAACCGAAAACCAAAAAAACCAAGAAACTTTTCCTATTT
GCAATTGAAAATGCATTAGTCAGCAAACTTAATCAAAACAAAAAGGCAACCGAATAATACAAGTACTCATATTTATATAT
TTAAAGTGTAACAATGTGACACATATATTTGTATAATTAGCAAAATTTTGTGGGACCGAAAACAGCACCAACAACTAAAG
GAGCAACTGCAATGTATCTACAAGATATCAGGTATCTTGGGCTCTGTTTTTGGTTTACCAGTTGAACATTTTCGAAACGA
AATTGAATACGGAAAGGTTTAAGGAGATTTATGGAATCCGAAAATTATATTCTTTAAAGCAACGGATCGAGATTGTTAAT
GAATGAAGCTGTATATATACATTTTAAAATATCGTATAACTATAACTATATTTTCTTCTCGATAATTTACGTTTAAATTC
ATAGCTGGGACGACGTCATTATTTCAAAGTGTTGCAATTTATCGTTTTTAGTTTCACTTCATTTACAATGTACGAATATG
TTCTAAATATTATGATTTCACTTTTTTATTTGTTATTTTATATGCAAACATTATTGAAAATAAATAAAACCGCACATTCG
CATCTTTGCAAGTGT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      jp-RA
      FBtr0079861
      5381
      jp-RB
      FBtr0079860
      5802
      jp-RC
      FBtr0113030
      2148
      jp-RD
      FBtr0304056
      4284
      jp-RE
      FBtr0304057
      4976
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      jp-PF
      FBpp0428274
      1054
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      jp-PA
      FBpp0079457
      1054
      jp-PB
      FBpp0079456
      1054
      jp-PC
      FBpp0111943
      129
      jp-PD
      FBpp0293019
      1054
      jp-PE
      FBpp0293020
      1054
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      transcript_exception: dicistronic_mRNA

      Dicistronic transcript; alternative monocistronic transcript(s) exist.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      jp-RF
      Secondary FlyBase IDs
        References (0)