FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
CV Term Report
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General Information
Term RNA polymerase II cis-regulatory region sequence-specific DNA binding ID (Ontology) GO:0000978 (Gene Ontology)
Definition Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.
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Annotations
Records annotated with this term OR any of its CHILD TERMS
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Data Class Field Records
Genes (FBgn)  GO_BIOLOGICAL_PROCESS       3
Genes (FBgn)  GO_MOLECULAR_FUNCTION     369
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 Full annotation statements 
Relevant FlyBase reports
 Genes
 RNA polymerase II cis-regulatory region sequence-specific DNA binding (all annotations which use CV term, excluding "NOT" statements)     369
     contributes_to | RNA polymerase II cis-regulatory region sequence-specific DNA binding       5
     enables | RNA polymerase II cis-regulatory region sequence-specific DNA binding     366
Spanning Tree (Parents/Children)
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transcription cis-regulatory region binding
 |__RNA polymerase II transcription regulatory region sequence-specific DNA binding__
 |__cis-regulatory region sequence-specific DNA binding______________________________|
                                                                                     RNA polymerase II cis-regulatory region sequence-specific DNA binding  387 rec.
                                                                                      |__cAMP response element binding 2 rec.
                                                                                      |__carbohydrate response element binding
                                                                                      |__E-box binding 11 rec.
                                                                                      |__estrogen response element binding 5 rec.
                                                                                      |__GC-box binding
                                                                                      |__juvenile hormone response element binding 2 rec.
                                                                                      |__N-box binding
                                                                                      |__retinoic acid-responsive element binding
                                                                                      |__RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending
                                                                                      |__serum response element binding
                                                                                      |__sterol response element binding
                                                                                      |__vitamin D response element binding
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Is a RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
Part of
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Synonyms
  • "RNA polymerase II core promoter proximal region sequence-specific DNA binding" RELATED
    "RNA polymerase II distal enhancer sequence-specific DNA binding" RELATED
    "RNA polymerase II promoter proximal region sequence-specific DNA binding" RELATED
    "RNA polymerase II proximal promoter sequence-specific DNA binding" RELATED
    "RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding" RELATED
Secondary IDs
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