FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
CV Term Report
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General Information
Term RNA binding ID (Ontology) GO:0003723 (Gene Ontology)
Definition Binding to an RNA molecule or a portion thereof.
Comment
Links to External Ontologies
  QuickGO data     AmiGO data
Annotations
Records annotated with this term OR any of its CHILD TERMS
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Records annotated with this exact term (annotations to child terms are NOT included)
Data Class Field Records
Genes (FBgn)  GO_MOLECULAR_FUNCTION     480
show Full annotation statements including this term (annotations to child terms are NOT included), and relevant FlyBase records
 Full annotation statements 
Relevant FlyBase reports
 Genes
 RNA binding (all annotations which use CV term, excluding "NOT" statements)     480
     contributes_to | RNA binding       4
     enables | RNA binding     480
Spanning Tree (Parents/Children)
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  binding
   |__nucleic acid binding
       |__RNA binding  1203 rec.
           |__7S RNA binding 6 rec.
           |__21U-RNA binding
           |__alpha-aminoacyl-tRNA binding 1 rec.
           |__BRE binding
           |__double-stranded RNA binding 23 rec.
           |   |__double-stranded miRNA binding
           |   |__RNA strand-exchange activity
           |__G-quadruplex RNA binding 2 rec.
           |__GU repeat RNA binding 1 rec.
           |__histone pre-mRNA DCP binding 1 rec.
           |__lncRNA binding 12 rec.
           |__misfolded RNA binding
           |__mRNA binding 726 rec.
           |   |__iron-responsive element binding 1 rec.
           |   |__mRNA 3'-UTR binding(+) 129 rec.
           |   |__mRNA 5'-UTR binding 8 rec.
           |   |__mRNA cap binding
           |   |__mRNA CDS binding
           |   |__selenocysteine insertion sequence binding 1 rec.
           |   |__sequence-specific mRNA binding(+) 96 rec.
           |   |__triplet codon-amino acid adaptor activity(+) 381 rec.
           |__pre-miRNA binding 2 rec.
           |   |__trans-activation response element binding
           |__pre-mRNA binding 37 rec.
           |   |__histone pre-mRNA stem-loop binding 2 rec.
           |   |__pre-mRNA 3'-splice site binding 5 rec.
           |   |__pre-mRNA 5'-splice site binding 10 rec.
           |   |__pre-mRNA branch point binding 8 rec.
           |   |__pre-mRNA intronic binding(+) 4 rec.
           |__primary miRNA binding 1 rec.
           |__pumilio-response element binding
           |__regulatory region RNA binding 1 rec.
           |   |__transcription regulatory region RNA binding
           |__regulatory RNA binding 17 rec.
           |   |__miRNA binding(+) 4 rec.
           |   |__piRNA binding 6 rec.
           |   |__siRNA binding 8 rec.
           |__ribonuclease P RNA binding 9 rec.
           |__RNA cap binding 15 rec.
           |   |__mRNA cap binding
           |   |__RNA 7-methylguanosine cap binding 11 rec.
           |   |__RNA cap 4 binding
           |   |__RNA trimethylguanosine cap binding
           |__RNA modification guide activity 11 rec.
           |   |__RNA 2'-O-ribose methylation guide activity(+) 5 rec.
           |   |__RNA pseudouridylation guide activity(+) 6 rec.
           |   |__rRNA modification guide activity(+) 4 rec.
           |   |__snRNA modification guide activity(+) 9 rec.
           |   |__tRNA modification guide activity(+)
           |__RNA stem-loop binding 4 rec.
           |   |__snRNA stem-loop binding 1 rec.
           |__rRNA binding 47 rec.
           |   |__5.8S rRNA binding
           |   |__5S rRNA binding(+) 4 rec.
           |   |__large ribosomal subunit rRNA binding(+) 6 rec.
           |   |__rRNA modification guide activity(+) 4 rec.
           |   |__rRNA primary transcript binding 3 rec.
           |   |__small ribosomal subunit rRNA binding 4 rec.
           |__single-stranded RNA binding 39 rec.
           |   |__poly-purine tract binding(+) 12 rec.
           |   |__poly-pyrimidine tract binding(+) 16 rec.
           |   |__RNA strand annealing activity
           |   |__RNA strand-exchange activity
           |   |__steroid receptor RNA activator RNA binding
           |__snoRNA binding 17 rec.
           |   |__box C/D sno(s)RNA binding 1 rec.
           |   |__box H/ACA snoRNA binding 2 rec.
           |   |__U3 snoRNA binding 3 rec.
           |__snRNA binding 36 rec.
           |   |__7SK snRNA binding 2 rec.
           |   |__snRNA modification guide activity(+) 9 rec.
           |   |__snRNA stem-loop binding 1 rec.
           |   |__U1 snRNA binding 4 rec.
           |   |__U2 snRNA binding 5 rec.
           |   |__U4 snRNA binding 6 rec.
           |   |__U4atac snRNA binding 1 rec.
           |   |__U5 snRNA binding 2 rec.
           |   |__U6 snRNA binding(+) 9 rec.
           |   |__U6atac snRNA binding 1 rec.
           |   |__U7 snRNA binding 2 rec.
           |   |__U11 snRNA binding
           |   |__U12 snRNA binding 1 rec.
           |__telomerase RNA binding 3 rec.
           |__telomeric repeat-containing RNA binding
           |__tRNA binding 35 rec.
               |__methionyl-initiator methionine tRNA binding 1 rec.
               |__tRNA modification guide activity(+)
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Is a nucleic acid binding
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Synonyms
  • "base pairing with RNA" NARROW
    "poly(A) RNA binding" RELATED
    "poly(A)-RNA binding" RELATED
    "poly-A RNA binding" RELATED
Secondary IDs
hide External Crossreferences & Linkouts
Reactome:R-HSA-203922 "Exportin-5 recognizes 3' overhang of pre-miRNA"