A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}Rabex-5EP681a Insertion

General Information
Symbol Dmel\P{EP}Rabex-5EP681a Species D. melanogaster
Name FlyBase ID FBti0016460
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) Rabex-5 Viability / fertility
Causes allele(s) Rabex-5EP681a Stock availability 1 publicly available
LINE ID EP(3)0681
Genomic Location
Chromosomal location 3L ( 61F5 ) Sequence location 3L:1,295,884..1,295,884
Map ( GBrowse ) detailed view FBti0052322 FBti0065240 FBti0065908 FBti0066984 FBti0047870 FBti0016460 FBti0053154 FBti0109766 FBti0025168 FBti0105940 FBti0104692 FBti0107965 FBti0025307 FBti0048180 FBti0040134 FBti0058137 FBti0111067
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
3
(BDGP Project Members, 1994-1999)
Sequence Location
3L:1,295,884..1,295,884
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
61F5 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
61F5 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
BH634802
(FlyBase, 1996-)
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Rabex-5
(BDGP Project Members, 2000-, Cheli et al., 2010)
hide Alleles and Phenotypes
Causes alleles
Rabex-5EP681a
(FlyBase, 1996-, Cheli et al., 2010)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Expression of CG9139[EP681a] under the control of Scer\GAL4[GMR.PF] has no effect on the reduced red eye pigment phenotype of blos1[ex2] flies.
(Cheli et al., 2010)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(3)0681
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17189
w1118; P{EP}Rabex-5EP681a P{EP}slmbEP681b
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP(3)0681
(FlyBase, 1992-)
P{EP}CG9139EP681a
(FlyBase, 1996-, FlyBase, 1992-, Cheli et al., 2010)
P{EP}EP0681
(FlyBase, 1992-)
P{EP}EP681
(FlyBase, 1992-)
P{EP}Rabex-5EP681a
 
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Cheli et al., 2010, Hum. Mol. Genet. 19(5): 861--878
Genetic modifiers of abnormal organelle biogenesis in a Drosophila model of BLOC-1 deficiency. [FBrf0209903]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]