FB2025_01 , released February 20, 2025
Transcript: Dmel\Pka-R1-RO
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General Information
Symbol
Dmel\Pka-R1-RO
Species
D. melanogaster
Annotation Symbol
CG42341-RO
FlyBase ID
FBtr0299893
Feature type
mRNA
Associated gene
Dmel\Pka-R1
Evidence Rank
Length (nt)
3424
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 48 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          TGCAGAAGCATCCTGCTTCCACCTAGTTCACTCCGTTCGTTTGCTTTTTATTTGTTTGCCTCCGCGCGCCATGGGCAACC
AGTTGAGTGTGAACAGCATCCAGGATGCGGTCATCGATCGCTTCCGCTCGGTGGCTTTGACCACCGATGCCAACGGCGCC
ATGCGCATCCGTTCGTTTTCGGAGGGCGTGGTGGCCACCACCCACCATCATCATCAGCATCAGCAGAATCAGCAGCAGAG
TCCCCATTGCAGTGGACGCGGCGGACGCATCCTGCGCGAAAGTAGCATCGATGGCGGGGTGGCCATGTTCGATGCTCTGC
TCCGCGATGATCACGAACATCGGCTGAGCTTGGATGCAGTGCATCGCATGCGGCATGTTCGCACCTCCTGCACCACAATT
CCCGAGGAGGATGCCGTCAGCGATCGCAGCCTGCAGATTCATCTCTCCACTCTGGCCCGCGAACGTGAACAGGAACTTGA
GCTTGAGCGCCAGCGGGAACGCGAAGAACAAGTCAAACTGGATGCCAGTAGACAGGTAATCAGCCCCGACGACTGCGAAG
ATCTCAGCCCGATGCCACAAACAGCTGCTCCACCGGTTCGCAGGCGAGGCGGAATCTCCGCCGAACCCGTAACCGAAGAG
GATGCCACCAACTATGTTAAGAAGGTGGTGCCCAAGGACTACAAGACGATGAATGCCCTGTCCAAGGCGATTGCCAAGAA
CGTCCTGTTCGCTCACTTGGACGAGAGCGAGAGATCCGACATATTTGATGCCATGTTCCCTGTGAATCACATCGCCGGCG
AGAATATCATCCAGCAGGGCGATGAAGGCGACAACTTCTACGTGATTGATGTGGGAGAGGTCGATGTTTTCGTCAACTCC
GAACTAGTGACCACCATCAGCGAGGGCGGCAGCTTTGGTGAACTGGCCCTCATCTATGGCACTCCTCGCGCCGCCACCGT
GCGCGCCAAAACCGATGTGAAGCTGTGGGGAATCGACCGCGACTCCTACCGCCGCATTCTGATGGGCTCGACCATCCGCA
AGCGCAAGATGTACGAGGAGTTCTTATCGCGCGTGTCCATTCTGGAGAGCTTGGACAAATGGGAGCGCCTCACAGTGGCC
GATTCCCTGGAGACGTGCTCCTTCGATGACGGTGAGACGATTGTCAAGCAGGGAGCAGCTGGCGATGACTTCTACATCAT
CCTCGAGGGCTGTGCGGTGGTGCTGCAGCAGCGTTCTGAGGGCGAGGATCCCGCCGAGGTGGGCCGTCTGGGTAGCAGCG
ATTACTTTGGCGAGATTGCTCTGCTTTTGGACCGACCACGTGCAGCGACTGTTGTAGCTCGTGGGCCGCTCAAATGCGTC
AAACTGGACCGGGCGAGATTTGAACGCGTGTTGGGACCCTGCGCCGACATACTCAAACGCAACATCACGCAATACAACAG
TTTCGTATCGTTGTCCGTTTAAGACCGCAACAACGACAACAACCACTACAGCAGATAAACAACAAAGAGCAGCAGCAGCA
AAGAAAGCAACTACAACCGACAAAACAAACAGAAACAACAACGCAGCGAACGTGAGAAACCAACAGGAAGACGATGGGAA
CTAGTTGGATAGATATATAGATAAGAAAAACAAACGCTCAGCAGCATAAACATGAAGTCGTAACTTATATAAGTGTGTAA
AATTAATTGTCACAGCCATTTGATTCTCGATTCTGTCGGAGATTCAGATTCAGATTCAGAGAGCACGCGGGCTGAGGGCT
AAACAAATATTAATTATCCGATTCTGTATGTTGTGCTGAAGTTATATAATTGTGTATGTGTGTGTCTCTGTGCAAAGGTT
GCGTCGGCATGTTCCACACCCCGCGACCCCCGATATCGGAGATAGCTTTCCCCGGATACATCTATATACTTCTCTCAACT
TCTTTTAAATTCTCCGGGTCTTTCGAAAAAGAGAGCCCATTTGTATAATCTATGGGACATGCTGCCTCCTCAAAAACGTT
TCATTAAATATCCAACAGACATCTGAATGTTTTTAAAAAAAGAAATAAACAAGATGAATATATGTGTAATAACTTAAATC
ATAAAAGGCTACACACACAGGCACAAAACACAGACACACCAACTCACACACTCTCATACGAGGCATGAAGTCATGGAAAT
GATAGGACTTGAATGAAACAATGGTATTTTGCTTGTATGATTCGTTGTTTTTTGTCTAGAACAAAAGCACAACGGCAGCA
ATTAATTAACCATTTTAATTTTAATTTTAGTAAATTATTCTTACAAGTAAACGCGTACCACGTGAAGTCAGCGAGCGTAA
ACTTTTCAATTAAACATTAAAATCAGTGAAAACTTCATGATTTTTTAACATGTTTCTTGTTTCTTCATCGAAAGGTGTTT
TGTAATCTTAACATAGTTTTATGATTTTTTATTAACTAATTTAAGCTTGAGCACAGCGAATGCCTAGTTTAACTGTTATC
AAAGAGGTATTTCCGTTCTTCAAAAATGTACATATGTCAAGTTTAGAAAGTTGTTTTATTTTCTTATATTGTAAGACTGT
AATTTTGGAGTTTTGGGCTTTAAAAAAAAGCCATACAATACTTTTTAATCACGTTATGATAGTTGAAAATTTAAAATTAA
AATTGATTGATTATACACATTTCTTGGAATACCTCTAAAGTTTCAAAACTAATGTACTAGGCATTTCCCAAAACTGCCAG
CTAACGAGAAGATAACTGCAACAATTTATATCGGATAGCATGGGTTTGCCTGTGTGTTGGGTGAGTGTGCGTGTGTATCT
GTGTGAACTAATGAATATTGCCCAAACGAGAAGTTGCATTTACAACACTCAGAAAAAAACGCAGCCAACAAGAACATTTG
TGTGTATATATTTATAAAGCTTATATCTGCTCGATAGATCATGAAACATTATCTACAGCTGTTGCTACATCACACGCGCA
CACACTCATCCACCTCCTCTCAAACATGAAGTCATAACTGGAAAATGCGATTTTGAAATGCACACATACTGAGATAAAGC
TAAAATTTTGACATTTTTACAGACCAGAAGCTTAAATCGAAAATATCTGTGCTAATATTTCAGCTATGAGACACTGTTAG
AAAATGAGCAAAATGCAAAATGCTAAAGGTTGAGCCTATGTAGAACATTTGTAAGGGGTCTGCGCCGTGTGCAGGCCACG
CCCATTTGGGCGTAGATGGAACCCGCCGGCGGGTCAGAAACGAAAATAAAAGGCAAAATCGTTTTGAGGTCACGGAAAAA
TCAACTTTAAGCCGACGTGCAGGCAGTGGAGGCAAGGAGATCGAGTGGAATACAATTAAATTACAAGCATAATATTATCA
ATGTAAAATCGTATGTAAAAAACAAGGCAGAAATCCATAAAAAAATTGACAACAAACAAACAAC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Pka-R1-RAA
          FBtr0302641
          3638
          Pka-R1-RAB
          FBtr0302642
          3580
          Pka-R1-RAC
          FBtr0302643
          3243
          Pka-R1-RK
          FBtr0299891
          2245
          Pka-R1-RL
          FBtr0299892
          2867
          Pka-R1-RM
          FBtr0300528
          3635
          Pka-R1-RN
          FBtr0300529
          3242
          Pka-R1-RP
          FBtr0300530
          3577
          Pka-R1-RQ
          FBtr0300531
          2423
          Pka-R1-RR
          FBtr0300532
          3315
          Pka-R1-RS
          FBtr0300533
          3068
          Pka-R1-RT
          FBtr0300534
          3240
          Pka-R1-RU
          FBtr0300535
          3570
          Pka-R1-RV
          FBtr0302637
          1648
          Pka-R1-RW
          FBtr0302638
          2426
          Pka-R1-RX
          FBtr0302639
          3245
          Pka-R1-RZ
          FBtr0302640
          3318
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Pka-R1-PO
          FBpp0289171
          463
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Pka-R1-PAA
          FBpp0291781
          377
          Pka-R1-PAB
          FBpp0291782
          377
          Pka-R1-PAC
          FBpp0291783
          377
          Pka-R1-PK
          FBpp0289169
          376
          Pka-R1-PL
          FBpp0289170
          376
          Pka-R1-PM
          FBpp0289755
          376
          Pka-R1-PN
          FBpp0289756
          296
          Pka-R1-PP
          FBpp0289757
          376
          Pka-R1-PQ
          FBpp0289758
          321
          Pka-R1-PR
          FBpp0289759
          319
          Pka-R1-PS
          FBpp0289760
          296
          Pka-R1-PT
          FBpp0289761
          376
          Pka-R1-PU
          FBpp0289762
          376
          Pka-R1-PV
          FBpp0291777
          464
          Pka-R1-PW
          FBpp0291778
          322
          Pka-R1-PX
          FBpp0291779
          297
          Pka-R1-PZ
          FBpp0291780
          320
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG42341-RO
          Pka-R1-RO
          Secondary FlyBase IDs
            References (0)