FB2025_01 , released February 20, 2025
Transcript: Dmel\Pka-R1-RN
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General Information
Symbol
Dmel\Pka-R1-RN
Species
D. melanogaster
Annotation Symbol
CG42341-RN
FlyBase ID
FBtr0300529
Feature type
Associated gene
Evidence Rank
Length (nt)
3242
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 53 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        CGGCAATTCAACTGCCCTACACGGCATAACGGTATCGCCCACCCACCCAGCGCACATAGATACAAATACGCACCGTCTCA
        CACACACATCTGAAGGCAACTAGCGTGGAAAGATGAAGCCGCTGCCTCGGCTGACGTCGACGCAACGTCGACTGCGCAGC
        GAACGTCGATTGTCGCAAGTTGAACGCGAATTTCGAATTTAGTTTTCAGTTTGTGTCGCGCCTCCGTTTTGTAAATACGC
        GAAAAAAAGACATTCGCCAAGTCGAACAGCAATAATAGCAAGAAGAGCTCACAGCAACTAAATAATTAAAACGGAAACAG
        CGGGAACAAGTCAAACTGGATGCCAGTAGACAGGTAATCAGCCCCGACGACTGCGAAGATCTCAGCCCGATGCCACAAAC
        AGCTGCTCCACCGGTTCGCAGGCGAGGCGGAATCTCCGCCGAACCCGTAACCGAAGAGGATGCCACCAACTATGTTAAGA
        AGGTGGTGCCCAAGGACTACAAGACGATGAATGCCCTGTCCAAGGCGATTGCCAAGAACGTCCTGTTCGCTCACTTGGAC
        GAGAGCGAGAGATCCGACATATTTGATGCCATGTTCCCTGTGAATCACATCGCCGGCGAGAATATCATCCAGCAGGGCGA
        TGAAGGCGACAACTTCTACGTGATTGATGTGGGAGAGGTCGATGTTTTCGTCAACTCCGAACTAGTGACCACCATCAGCG
        AGGGCGGCAGCTTTGGTGAACTGGCCCTCATCTATGGCACTCCTCGCGCCGCCACCGTGCGCGCCAAAACCGATGTGAAG
        CTGTGGGGAATCGACCGCGACTCCTACCGCCGCATTCTGATGGGCTCGACCATCCGCAAGCGCAAGATGTACGAGGAGTT
        CTTATCGCGCGTGTCCATTCTGGAGAGCTTGGACAAATGGGAGCGCCTCACAGTGGCCGATTCCCTGGAGACGTGCTCCT
        TCGATGACGGTGAGACGATTGTCAAGCAGGGAGCAGCTGGCGATGACTTCTACATCATCCTCGAGGGCTGTGCGGTGGTG
        CTGCAGCAGCGTTCTGAGGGCGAGGATCCCGCCGAGGTGGGCCGTCTGGGTAGCAGCGATTACTTTGGCGAGATTGCTCT
        GCTTTTGGACCGACCACGTGCAGCGACTGTTGTAGCTCGTGGGCCGCTCAAATGCGTCAAACTGGACCGGGCGAGATTTG
        AACGCGTGTTGGGACCCTGCGCCGACATACTCAAACGCAACATCACGCAATACAACAGTTTCGTATCGTTGTCCGTTTAA
        GACCGCAACAACGACAACAACCACTACAGCAGATAAACAACAAAGAGCAGCAGCAGCAAAGAAAGCAACTACAACCGACA
        AAACAAACAGAAACAACAACGCAGCGAACGTGAGAAACCAACAGGAAGACGATGGGAACTAGTTGGATAGATATATAGAT
        AAGAAAAACAAACGCTCAGCAGCATAAACATGAAGTCGTAACTTATATAAGTGTGTAAAATTAATTGTCACAGCCATTTG
        ATTCTCGATTCTGTCGGAGATTCAGATTCAGATTCAGAGAGCACGCGGGCTGAGGGCTAAACAAATATTAATTATCCGAT
        TCTGTATGTTGTGCTGAAGTTATATAATTGTGTATGTGTGTGTCTCTGTGCAAAGGTTGCGTCGGCATGTTCCACACCCC
        GCGACCCCCGATATCGGAGATAGCTTTCCCCGGATACATCTATATACTTCTCTCAACTTCTTTTAAATTCTCCGGGTCTT
        TCGAAAAAGAGAGCCCATTTGTATAATCTATGGGACATGCTGCCTCCTCAAAAACGTTTCATTAAATATCCAACAGACAT
        CTGAATGTTTTTAAAAAAAGAAATAAACAAGATGAATATATGTGTAATAACTTAAATCATAAAAGGCTACACACACAGGC
        ACAAAACACAGACACACCAACTCACACACTCTCATACGAGGCATGAAGTCATGGAAATGATAGGACTTGAATGAAACAAT
        GGTATTTTGCTTGTATGATTCGTTGTTTTTTGTCTAGAACAAAAGCACAACGGCAGCAATTAATTAACCATTTTAATTTT
        AATTTTAGTAAATTATTCTTACAAGTAAACGCGTACCACGTGAAGTCAGCGAGCGTAAACTTTTCAATTAAACATTAAAA
        TCAGTGAAAACTTCATGATTTTTTAACATGTTTCTTGTTTCTTCATCGAAAGGTGTTTTGTAATCTTAACATAGTTTTAT
        GATTTTTTATTAACTAATTTAAGCTTGAGCACAGCGAATGCCTAGTTTAACTGTTATCAAAGAGGTATTTCCGTTCTTCA
        AAAATGTACATATGTCAAGTTTAGAAAGTTGTTTTATTTTCTTATATTGTAAGACTGTAATTTTGGAGTTTTGGGCTTTA
        AAAAAAAGCCATACAATACTTTTTAATCACGTTATGATAGTTGAAAATTTAAAATTAAAATTGATTGATTATACACATTT
        CTTGGAATACCTCTAAAGTTTCAAAACTAATGTACTAGGCATTTCCCAAAACTGCCAGCTAACGAGAAGATAACTGCAAC
        AATTTATATCGGATAGCATGGGTTTGCCTGTGTGTTGGGTGAGTGTGCGTGTGTATCTGTGTGAACTAATGAATATTGCC
        CAAACGAGAAGTTGCATTTACAACACTCAGAAAAAAACGCAGCCAACAAGAACATTTGTGTGTATATATTTATAAAGCTT
        ATATCTGCTCGATAGATCATGAAACATTATCTACAGCTGTTGCTACATCACACGCGCACACACTCATCCACCTCCTCTCA
        AACATGAAGTCATAACTGGAAAATGCGATTTTGAAATGCACACATACTGAGATAAAGCTAAAATTTTGACATTTTTACAG
        ACCAGAAGCTTAAATCGAAAATATCTGTGCTAATATTTCAGCTATGAGACACTGTTAGAAAATGAGCAAAATGCAAAATG
        CTAAAGGTTGAGCCTATGTAGAACATTTGTAAGGGGTCTGCGCCGTGTGCAGGCCACGCCCATTTGGGCGTAGATGGAAC
        CCGCCGGCGGGTCAGAAACGAAAATAAAAGGCAAAATCGTTTTGAGGTCACGGAAAAATCAACTTTAAGCCGACGTGCAG
        GCAGTGGAGGCAAGGAGATCGAGTGGAATACAATTAAATTACAAGCATAATATTATCAATGTAAAATCGTATGTAAAAAA
        CAAGGCAGAAATCCATAAAAAAATTGACAACAAACAAACAAC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0302641
        3638
        FBtr0302642
        3580
        FBtr0302643
        3243
        FBtr0299891
        2245
        FBtr0299892
        2867
        FBtr0300528
        3635
        FBtr0299893
        3424
        FBtr0300530
        3577
        FBtr0300531
        2423
        FBtr0300532
        3315
        FBtr0300533
        3068
        FBtr0300534
        3240
        FBtr0300535
        3570
        FBtr0302637
        1648
        FBtr0302638
        2426
        FBtr0302639
        3245
        FBtr0302640
        3318
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0289756
        296
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0291781
        377
        FBpp0291782
        377
        FBpp0291783
        377
        FBpp0289169
        376
        FBpp0289170
        376
        FBpp0289755
        376
        FBpp0289171
        463
        FBpp0289757
        376
        FBpp0289758
        321
        FBpp0289759
        319
        FBpp0289760
        296
        FBpp0289761
        376
        FBpp0289762
        376
        FBpp0291777
        464
        FBpp0291778
        322
        FBpp0291779
        297
        FBpp0291780
        320
        Comments

        Due to an oversight in the implementation of gene annotation merges, the symbols for this transcript and its associated polypeptide were changed to non-unique designations in r5.9. Although there were no conflicts within a given release, the same symbols were used for different isoforms in different releases. Prior to r5.9 the transcript symbol was Pka-R1-RB; from r5.9 to r5.12, it was Pka-R1-RG; in r5.13 it was changed to Pka-R1-RN, a symbol that has not been used previously in the database.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Pka-R1-RN
        Secondary FlyBase IDs
          References (0)