FB2025_01 , released February 20, 2025
Transcript: Dmel\Pka-R1-RU
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General Information
Symbol
Dmel\Pka-R1-RU
Species
D. melanogaster
Annotation Symbol
CG42341-RU
FlyBase ID
FBtr0300535
Feature type
Associated gene
Evidence Rank
Length (nt)
3570
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 49 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          CCATATCAGACGCTCACCACTGCATGCAGCCCAAAAAAAACAACAACCCATCGATCAATCCATATGCTGCGGGGGAGTGC
          GGGGCTAAGGGCATTAATCATTAGGACATTGCAAAGAGGTCCGGAAACGTAAATTTTGTCAAGTGAAAACGGGGTTGTGC
          TGTGTGTGTGGAAAACGGAACAAAACGGTGCCAAAAACGCAAGGAAAAGCTGCGAAAGCGGTGCACAGCAAACGGGTTGA
          TAAAGCAGCAGGCTTAGATTTAAATTATCAGTGCTTTTAACCGATTTGCCAGCGAAACAATAACCGACATTCAATAACCA
          CCCACACAAACGTATTGTGTACATAATATATACATCCATACCTACATACGTATATTTTGCGTAGTGCGGCGCTTGAAAGC
          TGTTTCCCCATCACCATATCATCACTGCCATTCATTGCAAACCCACTCTGGAATCCATCCCACCTCCACCGTACCACATG
          TCCTACATGATGGCCAAAACGCTGGAGGAGCAGAGCCTGCGGGAGTGCGAACACTACATCCAGACGCATGGGATCCAGCG
          AGTCCTCAAGGACTGCATCGTCCAGCTGTGCGTCTGCAGACCCGAGAATCCCGTGCAGTTCCTGCGACAGTACTTTCAGA
          AACTCGAGAGGGAACAAGTCAAACTGGATGCCAGTAGACAGGTAATCAGCCCCGACGACTGCGAAGATCTCAGCCCGATG
          CCACAAACAGCTGCTCCACCGGTTCGCAGGCGAGGCGGAATCTCCGCCGAACCCGTAACCGAAGAGGATGCCACCAACTA
          TGTTAAGAAGGTGGTGCCCAAGGACTACAAGACGATGAATGCCCTGTCCAAGGCGATTGCCAAGAACGTCCTGTTCGCTC
          ACTTGGACGAGAGCGAGAGATCCGACATATTTGATGCCATGTTCCCTGTGAATCACATCGCCGGCGAGAATATCATCCAG
          CAGGGCGATGAAGGCGACAACTTCTACGTGATTGATGTGGGAGAGGTCGATGTTTTCGTCAACTCCGAACTAGTGACCAC
          CATCAGCGAGGGCGGCAGCTTTGGTGAACTGGCCCTCATCTATGGCACTCCTCGCGCCGCCACCGTGCGCGCCAAAACCG
          ATGTGAAGCTGTGGGGAATCGACCGCGACTCCTACCGCCGCATTCTGATGGGCTCGACCATCCGCAAGCGCAAGATGTAC
          GAGGAGTTCTTATCGCGCGTGTCCATTCTGGAGAGCTTGGACAAATGGGAGCGCCTCACAGTGGCCGATTCCCTGGAGAC
          GTGCTCCTTCGATGACGGTGAGACGATTGTCAAGCAGGGAGCAGCTGGCGATGACTTCTACATCATCCTCGAGGGCTGTG
          CGGTGGTGCTGCAGCAGCGTTCTGAGGGCGAGGATCCCGCCGAGGTGGGCCGTCTGGGTAGCAGCGATTACTTTGGCGAG
          ATTGCTCTGCTTTTGGACCGACCACGTGCAGCGACTGTTGTAGCTCGTGGGCCGCTCAAATGCGTCAAACTGGACCGGGC
          GAGATTTGAACGCGTGTTGGGACCCTGCGCCGACATACTCAAACGCAACATCACGCAATACAACAGTTTCGTATCGTTGT
          CCGTTTAAGACCGCAACAACGACAACAACCACTACAGCAGATAAACAACAAAGAGCAGCAGCAGCAAAGAAAGCAACTAC
          AACCGACAAAACAAACAGAAACAACAACGCAGCGAACGTGAGAAACCAACAGGAAGACGATGGGAACTAGTTGGATAGAT
          ATATAGATAAGAAAAACAAACGCTCAGCAGCATAAACATGAAGTCGTAACTTATATAAGTGTGTAAAATTAATTGTCACA
          GCCATTTGATTCTCGATTCTGTCGGAGATTCAGATTCAGATTCAGAGAGCACGCGGGCTGAGGGCTAAACAAATATTAAT
          TATCCGATTCTGTATGTTGTGCTGAAGTTATATAATTGTGTATGTGTGTGTCTCTGTGCAAAGGTTGCGTCGGCATGTTC
          CACACCCCGCGACCCCCGATATCGGAGATAGCTTTCCCCGGATACATCTATATACTTCTCTCAACTTCTTTTAAATTCTC
          CGGGTCTTTCGAAAAAGAGAGCCCATTTGTATAATCTATGGGACATGCTGCCTCCTCAAAAACGTTTCATTAAATATCCA
          ACAGACATCTGAATGTTTTTAAAAAAAGAAATAAACAAGATGAATATATGTGTAATAACTTAAATCATAAAAGGCTACAC
          ACACAGGCACAAAACACAGACACACCAACTCACACACTCTCATACGAGGCATGAAGTCATGGAAATGATAGGACTTGAAT
          GAAACAATGGTATTTTGCTTGTATGATTCGTTGTTTTTTGTCTAGAACAAAAGCACAACGGCAGCAATTAATTAACCATT
          TTAATTTTAATTTTAGTAAATTATTCTTACAAGTAAACGCGTACCACGTGAAGTCAGCGAGCGTAAACTTTTCAATTAAA
          CATTAAAATCAGTGAAAACTTCATGATTTTTTAACATGTTTCTTGTTTCTTCATCGAAAGGTGTTTTGTAATCTTAACAT
          AGTTTTATGATTTTTTATTAACTAATTTAAGCTTGAGCACAGCGAATGCCTAGTTTAACTGTTATCAAAGAGGTATTTCC
          GTTCTTCAAAAATGTACATATGTCAAGTTTAGAAAGTTGTTTTATTTTCTTATATTGTAAGACTGTAATTTTGGAGTTTT
          GGGCTTTAAAAAAAAGCCATACAATACTTTTTAATCACGTTATGATAGTTGAAAATTTAAAATTAAAATTGATTGATTAT
          ACACATTTCTTGGAATACCTCTAAAGTTTCAAAACTAATGTACTAGGCATTTCCCAAAACTGCCAGCTAACGAGAAGATA
          ACTGCAACAATTTATATCGGATAGCATGGGTTTGCCTGTGTGTTGGGTGAGTGTGCGTGTGTATCTGTGTGAACTAATGA
          ATATTGCCCAAACGAGAAGTTGCATTTACAACACTCAGAAAAAAACGCAGCCAACAAGAACATTTGTGTGTATATATTTA
          TAAAGCTTATATCTGCTCGATAGATCATGAAACATTATCTACAGCTGTTGCTACATCACACGCGCACACACTCATCCACC
          TCCTCTCAAACATGAAGTCATAACTGGAAAATGCGATTTTGAAATGCACACATACTGAGATAAAGCTAAAATTTTGACAT
          TTTTACAGACCAGAAGCTTAAATCGAAAATATCTGTGCTAATATTTCAGCTATGAGACACTGTTAGAAAATGAGCAAAAT
          GCAAAATGCTAAAGGTTGAGCCTATGTAGAACATTTGTAAGGGGTCTGCGCCGTGTGCAGGCCACGCCCATTTGGGCGTA
          GATGGAACCCGCCGGCGGGTCAGAAACGAAAATAAAAGGCAAAATCGTTTTGAGGTCACGGAAAAATCAACTTTAAGCCG
          ACGTGCAGGCAGTGGAGGCAAGGAGATCGAGTGGAATACAATTAAATTACAAGCATAATATTATCAATGTAAAATCGTAT
          GTAAAAAACAAGGCAGAAATCCATAAAAAAATTGACAACAAACAAACAAC
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0302641
          3638
          FBtr0302642
          3580
          FBtr0302643
          3243
          FBtr0299891
          2245
          FBtr0299892
          2867
          FBtr0300528
          3635
          FBtr0300529
          3242
          FBtr0299893
          3424
          FBtr0300530
          3577
          FBtr0300531
          2423
          FBtr0300532
          3315
          FBtr0300533
          3068
          FBtr0300534
          3240
          FBtr0302637
          1648
          FBtr0302638
          2426
          FBtr0302639
          3245
          FBtr0302640
          3318
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0289762
          376
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0291781
          377
          FBpp0291782
          377
          FBpp0291783
          377
          FBpp0289169
          376
          FBpp0289170
          376
          FBpp0289755
          376
          FBpp0289756
          296
          FBpp0289171
          463
          FBpp0289757
          376
          FBpp0289758
          321
          FBpp0289759
          319
          FBpp0289760
          296
          FBpp0289761
          376
          FBpp0291777
          464
          FBpp0291778
          322
          FBpp0291779
          297
          FBpp0291780
          320
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          Due to an oversight in the implementation of gene annotation merges, the symbols for this transcript and its associated polypeptide were changed to non-unique designations in r5.9. Although there were no conflicts within a given release, the same symbols were used for different isoforms in different releases. Prior to r5.9 the transcript symbol was Pka-R1-RH; from r5.9 to r5.12, it was Pka-R1-RJ; in r5.13 it was changed to Pka-R1-RU, a symbol that has not been used previously in the database.

          Transcript structure supported by FBrf0048100.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Pka-R1-RU
          Secondary FlyBase IDs
            References (0)