FlyBase Aberration Report: Dmel\Df(3R)LIN

General Information

Symbol

Df(3R)LIN

Species

D. melanogaster

Name

FlyBase ID

FBab0002599

Feature type

chromosomal_deletion

Computed Breakpoints include

[84A5];[>84B1]

Features within 84A5--84B1

Sequence coordinates

3R:6,752,399..6,753,536 [-] (Df(3R)LIN:bk1)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

ethyl methanesulfonate

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

Breakpoints

Causes alleles

Scr^LIN

(Southworth and Kennison, 2002)

Carries alleles

e¹

(Johnston et al., 1998)

p^p

(Johnston et al., 1998)

st¹

(Johnston et al., 1998)

Transposon Insertions

Formalized genetic data

pb << bk1 << zen << Scr << bk2

Genetic mapping information

Comments

Breakpoint 1 was linked to a BamHI-BamHI restriction fragment. The position of the restriction fragment on the reference sequence was inferred by a FlyBase curator.

(Rushlow et al., 1987)

Comments on Cytology

Left limit of break 1 from non-inclusion of pb (FBrf0051115) Right limit of break 1 from inclusion of Dfd (FBrf0064887) Left limit of break 2 from inclusion of Scr (FBrf0064887)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

bcd

(Struhl et al., 1989, Berleth et al., 1988, Driever and Nusslein-Volhard, 1988, Jurgens and Weigel, 1988, Tearle and Nusslein-Volhard, 1987)

Dfd

(Jurgens and Weigel, 1988)

Scr

(Southworth and Kennison, 2002, Jurgens and Weigel, 1988)

zen

(Jurgens and Weigel, 1988)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

ftz

(Southworth and Kennison, 2002)

(Johnston et al., 1998, Kaufman et al., 1990)

zen2

(Kaufman et al., 1990)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Stocks (2)

Bloomington

1906

Df(3R)LIN, st¹ p^p e¹/TM3, ry^RK Sb¹ Ser¹

Kyoto

106569

Df(3R)LIN, st¹ p^p e¹/TM3, Sb Ser

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Interacts with the RpII140^wimp maternal effect.

(Parkhurst and Ish-Horowicz, 1991)

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

Df(3R)LIN

(Lemons et al., 2012, Wratten et al., 2006)

Df(3R)LIN2

(Southworth and Kennison, 2002)

Df(3R)Lin

(Struhl et al., 1989)

Df(3R)lin

(Driever et al., 1990)

LIN

(Kaufman et al., 1990)

bcd^LIN2

Name Synonyms

Secondary FlyBase IDs

FBab0002600

References (20)

Report Sections

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