FlyBase Aberration Report: Dmel\Df(1)ED7289

General Information

Symbol

Df(1)ED7289

Species

D. melanogaster

Name

FlyBase ID

FBab0030900

Feature type

chromosomal_deletion

Computed Breakpoints include

[13A5-13A5];[13A12-13A12];

Features within 13A5--13A12

Genomic Maps

JBrowse

Sequence coordinates

X:15,024,777..15,024,777 (Df(1)ED7289:bk1)

(DrosDel Project, 2007.6.25)

X:15,125,750..15,125,750 (Df(1)ED7289:bk2)

(DrosDel Project, 2007.6.25)

Member of large scale dataset(s)

Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

(Ryder et al., 2007)

Nature of Aberration

Cytological Order

Progenitor

P{RS3r}CB-6275-3

(Ryder, 2003.6.17)

P{RS5r}5-HA-1032

(Ryder, 2003.6.17)

Mutagen

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Ryder, 2003.6.17)

Breakpoints

13A5;13A12

(FlyBase Curators, 2008)

Causes alleles

Carries alleles

Transposon Insertions

P{3'.RS5+3.3'}ED7289

(Cook, 2010.10.5)

Formalized genetic data

Genetic mapping information

Comments

Comments on Cytology

Limits of break 1 computationally determined from location of progenitor P insertion on genome sequence between P{EP}hiw^EP1305 and P{EP}hiw^EP1308 Limits of break 2 computationally determined from location of progenitor P insertion on genome sequence between P{EP}hiw^EP1308 and P{EP}Ahcy13^EP1007

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Rab3-GEF

(Bae et al., 2016)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (18)

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Dominantly modifies the size of pupae relative to wild-type controls.

(Walker et al., 2013)

Stocks (1)

Bloomington

29732

Df(1)ED7289, w¹¹¹⁸ P{3'.RS5+3.3'}ED7289/FM7h

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

Df(1)ED7289

(Sawyer et al., 2020, Hope et al., 2019, Farley et al., 2018, Johns et al., 2018, Bae et al., 2016, Cook, 2010.10.5, FlyBase Curators, 2008)

ED7289

(Walker et al., 2013)

Name Synonyms

Secondary FlyBase IDs

References (14)

Report Sections

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