FlyBase Aberration Report: Dmel\Df(1)BSC851

General Information

Symbol

Df(1)BSC851

Species

D. melanogaster

Name

FlyBase ID

FBab0046051

Feature type

chromosomal_deletion

Computed Breakpoints include

Features within 11B2--11D1 (Estimated cytology)

Genomic Maps

JBrowse

Sequence coordinates

X:12,583,216..12,583,216 (Df(1)BSC851:bk1)

(Cook et al., 2009.11.25)

X:12,896,607..12,896,734 (Df(1)BSC851:bk2)

(Cook et al., 2009.11.25)

Member of large scale dataset(s)

Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

(Cook et al., 2012)

Nature of Aberration

Cytological Order

Progenitor

P{XP}d06616

(Cook et al., 2009.11.25)

PBac{WH}f03966

(Cook et al., 2009.11.25)

Mutagen

FLPase

(Cook et al., 2009.11.25)

Class of aberration (relative to wild type)

chromosomal_deletion

(Cook et al., 2009.11.25)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Cook et al., 2009.11.25)

Breakpoints

Causes alleles

Carries alleles

Transposon Insertions

P+PBac{XP5.WH5}BSC851

(Cook et al., 2009.11.25)

Formalized genetic data

Genetic mapping information

Comments

Comments on Cytology

The breakpoints of Df(1)BSC851 predicted from the Release 5 genomic coordinates of the insertion sites of the progenitor transposable elements P{XP}d06616 and PBac{WH}f03966 are X:12477249 ;12790640--12790767 and the cytological breakpoints predicted from these coordinates are 11B2;11D1.

(Cook et al., 2009.11.25)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Smr

(Cook et al., 2009.11.25)

Partially deleted / disrupted