FlyBase Allele Report: Dmel\RfC38[k13807]

General Information

Symbol

Dmel\RfC38^k13807

Species

D. melanogaster

Name

FlyBase ID

FBal0101566

Feature type

allele

Associated gene

Dmel\RfC38

Associated Insertion(s)

P{lacW}RfC38^k13807

Carried in Construct

Key Links

Genomic Maps

JBrowse

Allele class

Mutagen

P-element activity

Nature of the Allele

Allele class

Mutagen

P-element activity

(Jaffe and Jongens, 2001, Beaton, 2000.1.31, Spradling, 1999.12.9, Spradling et al., 1999)

Progenitor genotype

Associated Insertion(s)

P{lacW}RfC38^k13807

Cytology

Description

Allele components

Component

Use(s)

Inserted element

P{lacW}

enhancer trap

Encoded product / tool

lacZ

reporter enzyme

Tagged with

Tag:NLS(P)

nuclear protein localization tag

Mutations Mapped to the Genome

Curation Data

Type

Location

Additional Notes

References

transposable_element_insertion_site

2L:11,130,068..11,130,068 [+]

(Maehara et al., 2012, Jaffe and Jongens, 2001, Beaton, 2000.1.31, Spradling, 1999.12.9, Spradling et al., 1999)

Variant Molecular Consequences

Associated Sequence Data

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL

Expression Data

Reporter Expression

Additional Information

Statement

Reference

Marker for

Reflects expression of

Reporter construct used in assay

Human Disease Associations

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Disease

Interaction

References

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease-implicated variant(s)

Phenotypic Data

Phenotypic Class

lethal | recessive

(Beaton, 2000.1.31)

Phenotype Manifest In

Detailed Description

Statement

Reference

Heterozygotes have wild-type eyes.

(Jaffe and Jongens, 2001)

No obvious phenotype.

(Spradling et al., 1999)

External Data

Linkouts

Interactions

Show genetic interaction network for Enhancers & Suppressors

Phenotypic Class

Enhancer of

Statement

Reference

RfC38^k13807/RfC38[+] is an enhancer of visible | recessive phenotype of cutlet^rJ865a

(Jaffe and Jongens, 2001)

Other

Statement

Reference

Nup160^EP372M18, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M25, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M26, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M39, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M94, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M133, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M142, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M185, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M215, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M227, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M180, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M69, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M54, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M55, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M64, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M75, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M121, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M123, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M85, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Nup160^EP372M161, RfC38^k13807/RfC38[+] has viable phenotype

(Maehara et al., 2012)

Phenotype Manifest In

Enhancer of

Statement

Reference

RfC38^k13807/RfC38[+] is an enhancer of ommatidium phenotype of cutlet^rJ865a

(Jaffe and Jongens, 2001)

RfC38^k13807/RfC38[+] is an enhancer of eye photoreceptor cell phenotype of cutlet^rJ865a

(Jaffe and Jongens, 2001)

Additional Comments

Genetic Interactions

Statement

Reference

The cutlet^rJ865a eye phenotype is enhanced by one copy of RfC38^k13807; the majority of ommatidial clusters in these flies have an abnormal number of photoreceptor cells and a large number of ommatidia are fused.

(Jaffe and Jongens, 2001)

Xenogenetic Interactions

Statement

Reference

Complementation and Rescue Data

Comments

Images (0)

Mutant

Wild-type

Stocks (2)

Bloomington

11109

y¹ w^67c23; P{lacW}RfC38^k13807/CyO

Kyoto

111333

y^d2 w¹¹¹⁸ P{ey-FLP.N}2 P{5xglBS-lacZ.38-1}TPN1; P{lacW}RfC38^k13807 P{neoFRT}40A/CyO y⁺

Notes on Origin

Discoverer

The lethality of the "l(2)k13807" chromosome is separable from the P{lacW}RfC38^k13807 insertion.

(Spradling, 1999.12.9)

Comments

Reversion analysis proved that the P{lacW} is responsible for the lethal phenotype.

(Beaton, 2000.1.31)

Complements: Nup154⁰¹⁵⁰¹. Complements: l(2)04008⁰⁴⁰⁰⁸. Complements: cmet⁰⁴⁴³¹. Complements: l(2)k00224^k00224. Complements: ab^k02807. Complements: cana^k07716. Complements: Nup154^k07717. Complements: Nup154^k08204. Complements: SCAR^k13811. Complements: l(2)k15817^k15817.

(BDGP Project Members, 1994-1999)

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (3)

Reported As

Symbol Synonym

RfC38^k13807

(Maehara et al., 2012)

l(2)rfc38^k13807

(Jaffe and Jongens, 2001)

n(2)k13807

(Spradling, 1999.12.9, Spradling et al., 1999)

Name Synonyms

Secondary FlyBase IDs

References (6)

Report Sections

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