FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Allele: Dmel\NimC1del
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General Information
Symbol
Dmel\NimC1del
Species
D. melanogaster
Name
FlyBase ID
FBal0368277
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Mutagen
    Nature of the Allele
    Mutagen
    Progenitor genotype
    Cytology
    Description

    The NimC1del allele comprises 2 independent deletions: a 6 bp microdeletion from nucleotides 2264 to 2270 ( 2L:13974483-2L:13974489 ), and a 355 bp deletion from nucleotides 1582 to 1937 ( 2L:13974817-2L:13975172 ) accompanied by a 5 bp insertion (at position 2L:13974817 ). The 355 bp deletion and the 5 bp insertion generate a frameshift mutation in both NimC1-RA and NimC1-RB transcripts. As a result of the frameshift, the insertion is followed by a newly arisen sequence of 12 codons and a UGA stop codon, predicting truncated products of only 307 (NimC1-PA) and 309 (NimC1-PB) amino acids, compared to the normal 620 and 622 amino acids. The truncated proteins lack their C-terminal regions, including their intracellular and transmembrane domains, as well as four NIM repeats from the extracellular region.

    Mutations Mapped to the Genome
    Curation Data
    Type
    Location
    Additional Notes
    References
    Comment:

    A 6bp deletion in the NimC1 coding region. One of two deletions in NimC1del.

    Comment:

    A 355bp deletion in NimC1 accompanied by a 5bp insertion (CGAAT). Leads to a frameshift. One of two lesions in NimC1del.

    Inserted_sequence:

    CGAAT

    Variant Molecular Consequences
    Associated Sequence Data
    DNA sequence
    Protein sequence
     
    Expression Data
    Reporter Expression
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    Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
     
    Disease-implicated variant(s)
     
    Phenotypic Data
    Phenotypic Class
    Phenotype Manifest In
    Detailed Description
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    External Data
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    Xenogenetic Interactions
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    Complementation and Rescue Data
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    Mutant
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    External Crossreferences and Linkouts ( 0 )
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    NimC1del
    Name Synonyms
    Secondary FlyBase IDs
      References (2)