FB2026_03 , released September 17, 2026
Clone: Dmel\SD04616
Open Close
General Information
Symbol
Dmel\SD04616
Species
D. melanogaster
Name
SD04616
FlyBase ID
FBcl0275596
Feature type
Computed gene(s)
 
Collection Status
DGC gold BDGP
Known Problems
none
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      4,295
      NCBI
      Full Length sequence dataSequence Downloader
      ACGCGCTGTATTTTATTTTAGTTGACTTCATGTGTGCATTGTCGTTCTGTGAGTGCGCGAATCCAACTAGAGTTCCGCTT
      CGTGTCTGCCAAGTAGCGAAGAAGTTTTGCAGTTGTACATTCGAAAAACAAGCAGGTAAATACTTTCATCCTTCTGGTAA
      AATACCCACCCTCAGTGAGCGGTAACTATGATCAGCCAAGCGTTTTCCCACTGGGGTCAAAGTTATCGTGTCTCATTTGG
      CGTGTTCGGAGTCGGATTCAGTTTTGAGATTCGGTGCTCTCACAGTCTCTGGTTAAGTTTCTATGCCAACGCCGACACAA
      AACTTATCAGCTACGATTAAAGCAGCGGAAGTGATTAGAGAACCGGAACGATTCGCACCGAAATCGGCGACGCACAAGAA
      ATTAACTAAACAATTGCAAAATTCCCTTTGGCTAAGGATTTGCAGCGGCCGTATTGCTTTTATGCTCTGCTGGCAGCTAC
      AAAATTCCACGAAATTCCATTTTGGCAAACCGAAGACAAACAAATCAATTTGCAGAGCCGCTGAAAAACAGCAGCAGCAT
      CAGCAGCATCAGCAGCATCAGCAGCCCCATTACCAAAATTCGAAAATAATTGGAAAATATCGAAAGCAGCGTCGTCGTTG
      TCGCCGTTCTGGCGCCCTTCGAACAGCTTGGATCCTGAGAGCTAAGGACACCGATACGGACAGAGATACGGACAAAGATA
      CGGCCACGGATCGGGACAAGGCTATAGCATCACTGCTGGCACCATGGATCCGCAGCAGCAGTTCTGCCTCAAATGGAACA
      GTTTCTCGTCTAACTTGGCAATAACATTCTCCAATCTGTTCAAATCGGATCTACTGGCCGATGTCATATTATCCTGCGAT
      GGCGTAGTATTCAAAGCCCACAAACTTATATTGGCGGCCTGCTCAAAGAAGTTCGCCGATCTGTTTGAGAACACGCCCAC
      AAATGGCCAGTGCGTCATCATACTGGAGGCGACCACGCCGGACAACATGGCCGCTCTGCTGGAGTTCATGTACAAAGGCG
      AGGTCCACGTCTCCCAGGAGGCGCTCAACAGTTTCCTCAAGTCCGCCGAGAGTTTGCAGGTCAAAGGTCTGTCCACGGAA
      ACGGGACGTCTGGCGGCGCAGCAGGCACAACAACACATGGGCGACCTGTCGCCACTTGACTCGCCGACGGGCAGGCGGAG
      CGTAAGGAACAGCCTGAGCGGCGGTAGCAGCAGCATCGTTCCCGGCGGAGTCGGAATCGGTCTGGGAGGAGGCGCAACGG
      GAGCCAACTCTATGTCCGGCATGGGCATTGGCAACGGATTGAGCTTGGCCGGTATGGCAGCTGGCGGAGGAATGGCGGCG
      GCTGCAAATGCGGCGGCCAGTAGCCTGAGCACCCTAGCGGCCAGCGCGAATATCGTTGACAGATGCGGCAGTGCTGGCGC
      CAACATAATCAGCGGATCGGCTGCAGGGATTGGCGGCTCCCATAGCGGGGGAGCGGGTAATGGCAGCGGCACAGTTGGAA
      TCGGTGGCAACGGTGTCGGCAGTGGTGGCGGCAACAATGGACCCATTAGCCTGGGAAGCGGCGCGGGCGCTGCTCACCAT
      CTGGGCGGATCCACTGGCATCTTGAAGCAGGAATGCGACTCCCTGATGCATCCGGGTGGCAGTAGTTCCTCTTCCGGAAT
      GGGCTACACCCATGTGCCGCCCATCTACCGGCCTATTAACTACGAACCTCCGCGCAAGAGGGCTATAGTCCGCAGTCCGT
      ATTCCGAGCAGGAACAGCGCGGTTCCGTCCTGCGAGATGGCTCCAAGTCCTCCGAGTGTCCCAGCCCCATCAACAAGCCG
      CCGTACCACCGTCCCTCGTCCAGCGCCTCCTCCACGGCGCCCACCGAGGCCGACACCATGCACTCCGAACGCGCATCGCC
      ACAGTCCAGTCGCTACGAGAACCATAGTCCCAGCACCACAGCGGGAAATGGAAATGCCACCAGTAGCCTGGAGCGTATTG
      TGAAATCAGAGCGAAACAATGGCAGTGCCAATGAGGCTAATGACGACGACCGCGAGCTTATGGATGAGTCTACAGATAAC
      GGAGCCGAGGATCTGCGCGTGAAGCTGGAGAACTTGAAGTACTCACCGCCACCGCCGCCAAACTCGAACACCTCGTCGAC
      CACACCGAATACGCTGCTGGAGAACCTGAAGGCGGACGGAACGCTGTCCAGTAACCTGGCCGCGTCGATTGCGCCGGCGG
      ACATGTTGAACGTATGGAACGCCACCAAGATGAACAACAAGAACAGCGTGAACACGGCCGACGGTAAGAAGCTGAAGTGT
      CTCTACTGCGATCGTCTGTACGGATACGAGACGAATCTGCGGGCGCATATCCGGCAGCGTCATCAGGGCATCCGAGTGCC
      ATGTCCCTTCTGCGAGCGGACCTTCACGCGAAACAACACGGTGCGCCGTCACATTGCCAGGGAGCACAAGCAGGAAATCG
      GATTGGCGGCGGGTGCAACAATTGCTCCAGCACACTTGGCAGCGGCAGCTGCAGCATCAGCAGCGGCTACAGCGGCAGCC
      AGCAATCATTCACCATAGGAAGCAGCCGCAACAGCAGCGGCATCAGTAGTCATGAACGCCAACAAGGAGGCGGCAAAGCA
      GCGCAAACGTAAAACACTCAAGATGGCACTGGAGAAGTGCATGCAGCGACGGGACGCAATGGTGGCGGAGACCACCGCGG
      GGGCAGGAGGAGATGGGGCAGAGGCAGGAGGGGAGTCGGGCGAGGCAGTCGACGGGGCAGGATCGGAAGAGGGAGCCGGT
      TCAGAGGGCACTGAACCGCTCACCTACGAGCAGCAGCAGCAGCGAATGCACCAGGAGCTGACGCAACAGATCAGGGCGGC
      CATGGCGGCCGAACAGGCAGCCGAGGCGATGGATTCGACCATGAACACCACGGTCAACACCACCACGACGACGACGACCA
      CAACCACAACGAACACCACTGGCGCCACCAGTGATGGTTGCAGTGACGCGGAGGCCAGCGATGGTAGCGATCGACCCATG
      GAAGTGGACGAGGACCAGCCACCGGAGCCACAGCCAGGATCTGAGCTCGTTGTAGTGGAGCCCAAGATCGAGGTGCTTTC
      GGAGTCCGAGGACGAGGAGGATCGACTGCACATGTCCGAAGCCGAACCGGATATCCAGGCCGAGGCCATTTACGATCACA
      TGCCCAACACGCCCACCAGCCCCCCACATATAATACCGCCCAACGATACGCCCACTCTGACCTCCACGCCCAAGGTCAAT
      GTGGAGCAATAGGATGAGGAGAAACGAGGAGATGCCCCCAGAGGATGCCCCCCAAAGAAGCTGCTTAGATTTAGGCTAAG
      AATCGATGAAACGACGGAGTGAAAGATAGACGAGTGATTTACGCGCGCGCAAAGAAGATGAAACATGACTACTGATGCAA
      CTGCTGTTGCCCTCGGAGACCACCTACGACCAAGCTGGACAAGAAGCCCCAAACTGGGCACATTGATTACTATGATAACT
      AAACAAGGAAACAAGGAACCTAATGATAAGATGTACCACACACGTGCACGTGTGCACACCAAACACACAGCAAACAGACG
      GACAGACAAGCGAACACACGAAAAACAGATGGCGAATTTGATGACCACCAACTTTTTGCAGGCATTTTTATTACGAATTT
      GTGTTTTTGAAGCCAATCACAATTCAAGCAGCAGGCACAAGCAAGAGCAACAAATCCAAACCAAACCAAACCAAACCAAT
      TAATGGCAGTATGAAACAGGACACTCAACCAGAAACCAGAAACAGAACCAGAAATATAGAATTAAATGCAATCCGGCTGA
      AAAATCGTTTTCAGGGTGCTAATCAAACAATGAAAAACAAGTGAAACTTACGAAACTAACGAAATAGTAATGCAAAAAGT
      TTGAACGTTTTTGATTGGTACCGCCCAAAAAGAGAGAGAGTAGCCAGCATATAGCAAAAACAAAACGTTGAGAATTTGTT
      TATTCGCGTGTGTTGAGGGAGTAGATCGATGATTAGATTATTGTCGCATATATTTTTGATTTCCTATAGAAACGTCACAG
      AACTGCAAGTTGCCTCAGATCAAAACGAAACGACAATGCTAAGCCTAAAAACTGAATTAAATAAGACGCGAGTAACTATA
      ATTAAACACTGCAAACACATAGCAACAAACAAACTACAGAGCAACAATAGCAACAACAAAACCGCAACCACAAGTACCTG
      CAACAATAAAATAGTATAAAAACAAAAGAAACAAAAAAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)