FB2026_03 , released September 17, 2026
Clone: Dmel\SD04959
Open Close
General Information
Symbol
Dmel\SD04959
Species
D. melanogaster
Name
SD04959
FlyBase ID
FBcl0280636
Feature type
Computed gene(s)
 
Collection Status
DGC gold BDGP
Known Problems
none
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      4,055
      NCBI
      Full Length sequence dataSequence Downloader
      AAAAAATAATGCTTTCATTTGCAATGTTTGTAAGCGAATAAAGTGCTTGAACTCATCAACTTAAACAAGTACAATGGGCA
      TATGAACAAATTATTTAGTCAGTGTGCAACTGGTGAACAGTAAAACAAAAAAATTCGTCATGCAGTCGTAGCGTTGCTAG
      TGCGCCCATAATAACGCTGAGACAAAAGCAAAAGATTTCGCGCCGAAAAGGAGGACGGCAGAAAACACGCATTGCACGGT
      GGAAAAGTAACAAAAACCGATTATAAATGGACTCTGATGTGGCGAAAATGTTTGCCAACTAAAAGCGATTGCGTGCGGTT
      GTAATTGTGATCCGTGGAAAGCGTACCGCCGTCAGTACCGCCCTCGCCCTTCGCCCCCCGCCACCGTTCCCCTTGCCAAC
      AACACAAAAACAATGGCCCCAGCGAAAAAACGCGAAAAAGACAGTAATCCGGATGGTTCTGCCGCAAATGGCATTATTGG
      CCTCACCCATGGAGCACCGGACGCGAGCAATGCTGGCTCTACTGTACCGCCGACGGCCGAGGGTCAGGTCAAACTCAATG
      GCCACCAGCAGGAGCAGGAACTCTTTTTGCAGGCCTTTGAGAAGCCCACGCAGATCTATCGCTACCTGCGCAATCGACAC
      GAGACAAACCCCATCTTCCTCAACCGCACGCTCAGCTACATGAAGGAACGGATGTCGCGGAACAACAAGAAGCGGATCAG
      CTTCCAGGTAAACTCCATGCTGGAGAGCATAACACAAAAGTCGGAGGCGGTGAGCCAGAACTACCTGCACGTCATCTACG
      ATTCGCTGCACGAGAAGTTGCCGGCGAGGTTGGACAACGAGTCTGGCGAGGATTTGCTGCAGGAGCAGCTGCTCTGCGAA
      GCGGGCGAGTCTGTGAGTGTGGAGACAACGCTGTACAAGATCACACGCAGCAAGCGAAAGGACAGCACGCTGGACTTTCA
      GGAGCTGCTCAGCAAGTGCTCGCAGATCGTGTACAACCCAAAGGATCGTGTGGGAGAACATGCCACCATCAGCATTCCTC
      TCCAGACGATGCGCCCAATGGGTGAGCAGCACACACTGTACAAGCTGCTATTTCGCATCAAGGTGCTGTCGCCAAGTACG
      TGCAATGATGAGAATGCAGAAACTCCACCGAACAAGCGGTCGCGTCCAAATGAGAAAATGTTCGGATCGGAACTGATATT
      GTACGAGAAGTCCAGCGGATTCATAACCGAAGGCGAGTACGAGGCCATGCTGCAGCCTCTTAATTCCACCAGCATCAAGT
      CCTTCTCACCAAAGAAATGCACATGGGAAACGATGCCGGATAGCTACATTCCACTCTCGTTGACCTACGACGTCTACCAG
      CAGAGTCCCATGCTCAAGTTCCATCTGACGCTATCCAATGAGCAGCTGCCCGAGATGATTTCCGCTCCGGAGCTGCAGCG
      TTATGTCCAGCATCTGGATGCGGTGGCCGAGATGAACTACAACAACAATAACTACAATAATAACAACAACTGCAGCGGAT
      TAAAGAATGGTAGTGGCGGAGGCAACAGCACGGTGTGCAAGACCACACCGGAGCACATTCAGATCGTGTACAACTTCATG
      TACAGCAATAATACCCGTCAGCAGACGGAGTACACCCAGGAGCTGAACTGCCCGTGGTGTGGCCTGGACTGCCTGCGTCT
      CTACGCCCTGCTGAAGCATCTAAAGCTTTGCCACGCCCGCTTCAACTTCACCTACCAGCCGGCTGGAAGTGGAGCTCGCA
      TAGATGTTACCATCAATGATGCGTACGACGGCTCGTATGCCGGATCGCCCTACGACTTGGCCGGTCCATCTGGCTCCTCG
      TTTGCCCGCACCTGCGGCCCCGTGCGACGCACCTCGGTCACCAGTCTGATGGTGTGCCGGCCCAGGCGGCAGAAGACCTG
      CCTGGACGAATTCCTGGAGCTGGACGAGGACGAGATTAGCAACCAGCGGTCGTACATTACCGGTCACAACAGACTCTACC
      ATCACACGGAGACTTGCCTACCCGTGCATCCCAAAGAGCTGGACATCGACTCCGAGGGCGAGAGCGATCCGCTGTGGCTG
      CGCCAGAAGACCATCCAGATGATCGACGAGTTTTCCGACGTGAACGAGGGTGAAAAGGAGTTGATGAAGCTGTGGAACCT
      GCACGTGATGCGTCACGGCTTTGTGGGCGATTGCCAGCTGCCGATCGCCTGCGAAATGTTCCTCGACGCCAAAGGCACTG
      AGATTGTGCGCAAGAATCTCTATCGCAACTTCATCCTGCATATGTGTTCGCTCTTCGACTACGGACTGATTGCGGCCGAG
      ACGGTCTACAAGACCGTACAGAAGCTTCAGGGTCTGCTCAGCAAGTACGCCGCCGGCCAGGAGCTGATGCAGCGGCAGCG
      CGAGGAGCAACTGAAGTATTGGTTGGATGTGGGCATGCACAAGAAGCAGGAAGACCCCAAGACACTCAAGTCACCCCAAA
      AGCCAGCACCGCCCGCAGACCAAGCATCTACCTCATCCGCATCCACCTCTGGAAGTGGTTCGGGGTCCAGCTCAATGCAG
      CCACCCAAACGAATGCCGGCTCATTTGAAACGAGGCAGCGCAGCGTCCTCCCCGGGCGTCCAGAGCAAGGGCACTGAAAA
      TGGCACCAACGGCAGCAACAGCAGCAGCAGCAACAGCAAGAACGTGGCCAAGAAGAGCGCCGACCAGCCGCTTAGCACCC
      TGGCTAACACAAGGGAGCGACGCTCGGAGTATGGCCAGAAACGCAATGTCAGCGGATCGCGACTGGCGGCCACACCAGCA
      TCGAAGCGCAAGCTGAGCTCCAAAGATGTGGAGCAGGCGGCGGATGCGCCAGAAGTGCTGACCCACAGCGATAATGCTGT
      CGATGTTGGTATTATTGATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTTATGAATGGAGTTGCGAGCCCAGTTGCCA
      ACAACTGTGTGGGCAACTAAATCAGTAATAATACAGTGCTTAACAAGCGGCAGCGTTACAGCGACGGAAGTCCCGGGACC
      GGGATCGGAAATGGACACGGAGGCGGAAGTGGAAGCGGAGCCAACCGCAACAAAAGCAATAACCATTCACTGCCAGCAAC
      CAGTAACAACGCCAGTAGCAGCAGCAGCAACAGCAAACGAGCGATTGCCCGGCGTCGCTCCACATCGGAGAGGACCAAGG
      CGAGCGGATCGACGGGAGGAGGAGCTGGTGGCGTCCGCACCAGGCTATCGGTGCCGGCCAAGTATGAGAGGCGCTGACGC
      AGGCGCCGCCGCTGCTGCTGCTGCTGCTCCAACTCATCCTCATCCTCATCGTCCTCCTCCTCCTCCTCCTCCTCAATAAT
      CGCCTCCCGTTGACCACATGCATCGCAGGGCTTAGTTTGTTTAATTCGTAGACGCAATGCCAGACCAGGCCATTTTGCAA
      ACCCTAAGTTTATTGCTATATATTCTATTCTATTATGTTGTGTTATATTTTAACTGATTGATCATGTTGGACATTTGTTA
      AGACTTGTGTCGAATTTGAAATTGACCTCAAAATCGTTCATTTGGTTCGTTGCTACCAGTTGCTACGCCACAATTGTATC
      TAAAATCAAATATACTTTAATTCTAATTTGGCAGTTACTTAAACTTAACAAATCTACAGGGCTAATGGAAAATCAAAATT
      CAAAATCGATTTGAATTCCCATGCTTACACTTCACATCCGGTTTGGATTGTGTAAACCAACCTTTTGTGGCGAAACAATG
      AGACAATTTTATCATATGTAATTAGTGCAGAGTGTATACAAATATATATATATATATATTTACAGCAGCAATAAGTAAGT
      CTATTTTTAAAGTAAAGTTCGTACAAGCGAAACAAACAGCTCCAAAAAAAAAATCCAGCAAGAACACTATCACTAGAGCC
      TACGACTACATACATTTATATATACGTATACATGCATAAATAAAAATCCACTTCGAGCACACGCAAAATTAATATTGCTA
      AAAGCCACTGAATAAAGTTTGCATATATATATTTTCAAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)