FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Clone: Dmel\SD27025
Open Close
General Information
Symbol
Dmel\SD27025
Species
D. melanogaster
Name
SD27025
FlyBase ID
FBcl0286421
Feature type
Computed gene(s)
 
Collection Status
DGC gold BDGP
Known Problems
none
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      1,923
      NCBI
      Full Length sequence dataSequence Downloader
      ATGTATCGAGCCGAATCGTGTTGTTGCTTTGCCTAGTTGATCATTCAGTTGGCGTACGCGTGCGCTGTGATCCGCCGATC
      TGATCTAAACCGATCCTCCAGATTCAGACGAAGTTATTTGATTCGGATACCGGAATTGTCAACAAAAGGCAGCGGCGCCG
      GCGTGTGGGTAAGAAGCAGAAAAGACAGTTTGTGCCCTAGCAATAACAAAAACAAGGCGAGAGAGAGACATTGTCGCCGC
      GCAGTCGCTCCTCTGCCGCCGTCAACGTCAGTGCCGCAGCGCACAGTTCGATCCGCTCGCTAGTTGTTGCTGTTTAGTGT
      TCGTTGTGGTGTCGCTTGTTGTTGTTTTGATCCGTCCGGAATCGCATAGCGATAATTCATATATATATAAATATATATAT
      ATATATATAAATTAATAGTGGTGCAAGAAGGCGAGCAAATCGAGTCAAGTCAAGTCAAATCAAATGCCCAATCTGCGTGT
      GCTTGTGTGCCTGTAATTGTTGTTTTGTTGTAATTGCACCCGCGCACACACTCAAACACTTAACTGCGGGAAAGAGCGCA
      TTCCAATCCCTACACACACACGCGCACACGCACACACAGCCACCGCCGATCATGGAAATTTGGCGCTCGCTCACAGTGGG
      CACCATCGTGCTATTGGCCATCGTCTGCTTCTACGGCACCGTGGAGTCCTGCAACGAGGTCGTCTGCGCCTCGATCGTCT
      CCAAGTGCATGCTCACCCAGAGCTGCAAGTGCGAGCTGAAGAACTGCTCCTGCTGCAAGGAGTGCCTCAAATGCCTGGGC
      AAGAACTACGAGGAGTGCTGCAGCTGTGTGGAACTCTGTCCGAAGCCCAACGACACCCGCAACTCGCTGTCCAAGAAGTC
      CCACGTGGAGGATTTCGATGGAGTGCCGGAGCTCTTCAACGCCGTGGCCACTCCGGATGAGGGCGACAGCTTCGGATACA
      ACTGGAACGTGTTCACGTTTCAAGTGGATTTCGACAAGTACTTGAAGGGACCCAAGCTGGAGAAGGACGGTCATTACTTC
      TTGAGAACCAATGATAAGAACCTGGACGAAGCGATTCAGGAGCGTGACAACATTGTGACCGTAAACTGCACGGTTATATA
      TCTGGATCAGTGCGTGTCGTGGAACAAGTGCCGCACCAGCTGCCAGACGACAGGCGCCAGCAGTACGAGATGGTTCCACG
      ACGGCTGCTGCGAATGTGTGGGATCCACGTGCATCAACTACGGCGTAAACGAGAGCCGCTGTAGAAAGTGCCCGGAGTCA
      AAGGGCGAACTGGGCGACGAGCTGGACGATCCCATGGAGGAGGAGATGCAGGACTTCGGGGAGAGCATGGGTCCGTTCGA
      TGGACCCGTGAACAACAACTACTGAGCGCGGTGCGATCAGGATGCCATTCAAGGATTCAAGAAACAGAACAAAACAGAAG
      CCCACATCTAACAAATTTAGCTACTCAATTCAGTGACATTATTATTATTATTATGTAGTACGAAGTAATATTTGTATAGC
      ACTATTATTATTATTTTTATTTACAACAAATGATTAGGCGCTTTGAATTGTTTTACTTATGAACCGGCCAAGATATATAT
      ATATATATATATTATATTACACATTTTTTTTTTGGACTAAAAAATTTATTTTTTGTCAATGTTTTTGAGAGTTTTGATAT
      TCTGGGGCGGGGTAAAGTGCAATTACTTAGTTGACCACACTTTGCTAACTTCTTCTTGTAAATAAAAATTTCATATGTAA
      ACAGTAATCGTTGTCTTTTAATGCATGTCTTAAGGTTAAATAAGCAATCAAGGCTCTACAAACACTCAATAAGTACATAA
      CTTAATTTTGGAATTAATTTACAAATGTCAACTATGTATAAATATGCCATTATTACTCAAAAAAAAAAAAAAAAAAAAAA
      AAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)