FB2026_03 , released September 17, 2026
Clone: Dmel\SD03071
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General Information
Symbol
Dmel\SD03071
Species
D. melanogaster
Name
SD03071
FlyBase ID
FBcl0291532
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      4,808
      NCBI
      Full Length sequence dataSequence Downloader
      CGAGTTGGACGTGTAACTCTTTGTAACGGATCTCGGAACGCCGTGGGAGTCGGAAAATCGCTGGACGCGTGTTCGTGCGT
      TTGCATGTGTGCGTGCGTTCGTGTGTGTGTGTGTGCTAATGTGCGAGCGGAAATAAACAATCCAGTTAATAAACACACAA
      AATCAATCAAAAAAGAAGATTTTTCTTTTTTATTTTCGCTTTTAATTTATTAACGAGAATAATAAATAAATAAATATAAA
      CAAAAATAAAAAAATAAGAAAAGTGTACGTGACAAGAGCTCGAAAAGAAGTTGCAACAAATAGCAAAAATAATTCGTGCG
      TGCGAAAAAGTGCTGCGAAGTTTTATGGCCCATGCAAAAAGTGCTAAATTTGTAAATGGCATGGAAAGTGCAAAGCTCTG
      ATTAAAAAACCCGCGAAGATTGGAGTGCGAGGTGCCGCCCAATAACGCAACCAACTACTGCCACAAGGAAATTATTAAGA
      CCAATCAACGACCTTTGCGGAAATAAAAAAAATAAAAAATAAAACAAAAGCAAGCAGAAATTTGGTGCTAGTTCTGTTTA
      GTCGACAGCCATCCACGTTGGATCCCCATCGCAAATAATGTCATCAAAATGTGCTTTCAACATTGTATTCGTATCGATCA
      TTTTCATCATCATCGTAAATGGTTACGCAAAAGATATTTCTGGAGTTAAAAGAGGTCATGAACGACTTAACGAATACATA
      TCCCACTATGAAACACTCAACTATGATCACGAGCACATCCGAGCTAGTCACAATAGAGCGCGACGATCAGTGACCAAAGA
      TCAATATGTACATTTAAAGTTTGCATCACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCA
      ATAAGTTAGACTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATAGGGGAT
      CGTAATAGTTATGTATTTGGTTCCATACACAATGGGGTATTCGAGGGTAAAATTATAACGGAACGTGATGCCTATTATGT
      TGAACATGCCAAACATTATTTTCCCACAAATCGCACGGCGACAACAACACCACCATCGACTTCGACGACATCCTCAGCAA
      CAACAGTCACAAAAAGCACACAACCAACACGGCCTTTGGCCAAAAGCAACACCAGTACTACTGCCGTTAATAGTAAGACA
      GAAAACTTTATAAAGAAAATTGCTGAATCCACAACGACGAGCCAGCAGCTTCCAGAATATACCGAATCGTCGTCGTCGTC
      GTCGACAACAACATTCCCACCCACAACAGAGTATTTCGAGGACGAAAAGGAGCGTAATGCCGAGGACGAACTTGATTTTC
      ACTCCATTATCTACAAGGAGTCACATGTCGAGGACGCCTACGAAAATGTGCGCGAAGGTCACGTGGCCGGCTGTGGCATC
      ACGGATGAGGTCTCTCAGTGGATGGAGAACATACAAAATTCAGCCGTCGAAGAGTTGCCGGAGCCCATGTCAAAGGACTA
      TCAAAAGCTCCACCGGAAGCAGCTGCACAAAAAGTCCGCCCCACAGCAACAACAGCAGCCCCATCCGCCGAAGAAGTACA
      TCAGCGGGGATGAGGACTTCAAGTATCCCCACCAGAAGTACACGAAGGAAGCTAACTTCGCCGAGGGTGCATTCTACGAT
      CCATCGACCGGACGTCGCCTGGGCTCATCCGCCAACGTGGCCGACTGGCATCAGCTCGTCCACGAGCGCGTCCGCCGCGC
      CACCGACAATGGTGCTGGGGATAGGGGCTCATCCGGTGGATCTGGACGCGGTCGCGAGGACAACAAGAATACCTGCTCGC
      TCTACATTCAAACGGATCCATTGATATGGCGCCACATACGCGAAGGCATTGCTGACCACGATCGTGGACGCAAGTACGAG
      GTGGATGAGAAAACGCGCGAGGAAATCACATCGTTGATTGCACATCACGTGACGGCCGTTAATTACATTTACCGCAACAC
      AAAGTTCGACGGACGCACCGAGCATCGCAACATACGCTTTGAGGTGCAACGCATTAAGATCGATGACGATTCGGCCTGTC
      GCAATTCCTACAATGGTCCACACAATGCCTTTTGCAATGAACACATGGATGTCTCGAACTTTTTGAATCTGCATTCCCTA
      GAAGATCACTCGGACTTTTGTTTGGCTTACGTGTTCACCTACAGAGATTTCACTGGCGGCACTTTGGGTCTGGCCTGGGT
      GGCCAGTGCGTCGGGAGCCTCTGGTGGAATTTGCGAGAAGTACAAGACGTACACGGAAACGGTGGGTGGACAGTACCAGA
      GCACCAAGCGATCACTCAACACGGGCATCATCACCTTTGTCAACTACAACAGTCGGGTGCCGCCGAAAGTGTCGCAGCTT
      ACGTTGGCACACGAGATAGGCCACAACTTTGGATCACCTCACGATTACCCGCAGGAATGTCGTCCTGGTGGCCTAAATGG
      CAATTACATTATGTTCGCCAGTGCCACCTCCGGTGATAGGCCAAATAACTCCAAGTTCTCGCCCTGCTCCATTCGGAACA
      TCTCCAATGTCCTTGACGTGCTGGTGGGCAACACGAAGCGCGACTGCTTCAAGGCCTCGGAAGGTGCCTTCTGCGGCAAC
      AAGATCGTGGAGTCTGGCGAGGAATGCGACTGTGGCTTCAACGAGGAGGAGTGCAAGGACAAGTGCTGCTACCCGCGTCT
      GATCAGCGAGTACGACCAGTCGCTGAACTCCAGTGCCAAGGGATGCACGCGCCGCGCCAAGACCCAGTGCTCACCATCGC
      AGGGTCCGTGCTGTCTGTCCAACTCCTGCACCTTTGTGCCGACGAGCTACCACCAGAAGTGCAAGGAGGAGACGGAGTGC
      AGCTGGTCGAGCACATGCAACGGAACCACGGCCGAGTGTCCGGAGCCACGACATCGCGATGACAAGACCATGTGCAACAA
      TGGAACAGCGCTATGCATCCGCGGTGAATGTAGTGGATCGCCATGTTTGCTCTGGAATATGACAAAGTGCTTCCTTACCT
      CGACCACACTGCCGCACGTGAGCAAGCGCAAGTTGTGCGACTTGGCCTGCCAGGATGGCAATGACACCTCCACCTGCCGC
      AGCACCAGCGAGTTTGCCGATAAATATAATATTCAAAAGGGTGGTATTAGTCTGCAGCCCGGTTCGCCATGCGATAATTT
      CCAGGGCTACTGCGATGTGTTCCTTAAGTGTCGAGCCGTGGATGCCGATGGTCCGCTTCTTCGGCTGAAGAATTTGTTGC
      TCAACCGGAAGACCCTGCAAACGGTGGCCGAGTGGATCGTCGACAATTGGTACCTAGTGGTTCTGATGGGAGTGGCCTTT
      ATTGTGGTCATGGGTTCGTTCATCAAATGTTGTGCCGTGCACACGCCCAGTTCCAATCCGAAGAAGCGACGAGCTCGTCG
      AATCAGCGAAACTCTAAGAGCACCCATGAACACGTTGCGTAGAATGCAACGTCATCCCAATCAGCGAGGAGCAGGTCCTC
      GAAGCATCCCACCGCCGGCACATGAGGCGCAGCATTATTCACGCGGCGGAGATGGTCGCGGCGGCGGCGGTGGAGGCGGA
      GGTCGCCACGGTGGCTCTAGGTCACACCATCAACAGCATCCGCACGATTGGGATCGTCATCAGGGTGGCCACTCAATCGT
      CCCATTGCCCACCGGCGGCAGCCATTCAAGTCGCAACTCGGCGGCGAATCAAGCGAGAAGAAGCGATGGACGAGGTCCAC
      GATCCACCAGCAGTGGGCGGCCGCAGGCTATAGCCAGCGGAAGCGGTGCCGCGAGCGGAGCAGCGCGATCTCATGGCGGG
      CGTCGCGCCGCCTCCGCTACAAGTAAGCTTTAGTCGGCCGACATCGTTGCACGAGCAACAGCAGCAGCAACATCATCTGC
      AGCAGCAGCAGCAGCATCAGCAGCAACTGGAGCCGCAGCAGCAACACGCCTATGCCGATGCTTATGCGGCCTTGGGGCGG
      GGCCAGTATGAGTCCACCACGCGGGCGCCCAACAACAGCAAGGTTTGACAGCCAAAAGTAGCAATGGAGCGCCACAAAAG
      GCCAAAGGCTAAGCGACTCAAGCAGCAGAAGGAGCCGCATACACAGCAAACAACAACACAGCAACAAAAGCAAAAACAAC
      ATAAATCAAATGAACTCAAATTAAATGTAAATGTAATTTTTATGCTAATTATCTTTATTTAAACAGTGTTTGTATGCCAC
      AAGGGAAAACAGCCAGCAACAAAAAGAAAAATACAAAAATAACACAAAAAAGGAGACAAATTTCGTAATACAGAAAAAGC
      TGAAAGTGAATGATATTTTTGATTAACTAAATTAAAATGAAAATACGAATGCAAATTATGAATAATAAAAGTAATTAAAA
      ACGACAACATGCATAATACATATAAAGTTGCAAGTTGCATATATATACATTTGTATGTATATATTTATTATGGATACACA
      ATTATTAAATAGCAGCAGCCACAACAAACAAGTAATATACATGAAGAAAAACTAAGGTTTAATTGTATGAGAAAGCATTC
      TATATGTCGGTGAGATTTCTAAGCGCTAGGCCGAAATACAAAATTAATTACACACTTGAATAACAAAATGTGTTTTGTAC
      AAAAAAATGAAATAAACAAAAACAGTGCGAATTAATTAAGCGTCATTATAAAAAAAGAACGGAAACAACAAAGCATTTAA
      ATTGTATTTATCTGTACCGAAGGCTAAACGTTTATTTAAAGCCGTCAAAATTGCATTTGTAAACTAGCAAAAAAAAAAAA
      AAAAAAAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 1 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)