FB2026_03 , released September 17, 2026
Clone: Dmel\SD04152
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General Information
Symbol
Dmel\SD04152
Species
D. melanogaster
Name
SD04152
FlyBase ID
FBcl0292095
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
    Library
    SD_cDNA
    • SD cDNA library of D. melanogaster, Schneider's Line-2 cells.
    Strain
      Vector
      Tissue Source
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      5,002
      NCBI
      Full Length sequence dataSequence Downloader
      AATCTGCCCATTCGTCTGGTAACCGAGGTTTTTATTGTTTCGGCGTTAAAATGCTCAAAAACCCGTCTGCATAGAAGGAA
      AACGCGGAACGTCTCGGAATTGCAAGCTTTTCGCGATATTCGGGCAATTGGAAAAACCGCGCATCCAGCAAAATCGTATC
      CACTAAGCTGCATTTGTATACAGAGCAGGTGGTGTTGTCTCCCTCTCGCGCCCGCACTGCTCGCTCCCGATGTGCGAGCG
      AAACAACAACAAACAAGTTACAAGCTCCAACAAAATTCCGTCTTCATTCAATGCGAAACTGGAGCTAGACTCCAGCAAAG
      ACGACACCATTCACTCCACAAGCTTGAACAAGAAGCTGGTCAAGATTAAAAAGTTCAAGTTGGACGATATGAAGGAAATG
      GTGGGCGGCTGTTGCGTTTGTTCAGACGAGCGGGGGTGGCCGGAGAACCCGCTCGTCTACTGTGACGGCCAGAACTGTAC
      TGTGGCAGTGCACCAGGCGTGCTATGGCATTGTGACGGTTCCCACTGGACCCTGGTACTGTCGCAAGTGCGAGTCCCAGG
      AGCGAACCTCTCGCGTCCGATGCGAACTATGTCCCTCGCGGGATGGCGCCCTTAAGAAGACGGATAATAGCGGGTGGGCG
      CACGTTGTTTGCGCCCTGTACATCCCAGAGGTGCGATTTGGGAATGTGACCACCATGGAGCCCATCATATTGTCATTAAT
      ACCGCAGGAGCGGTACTCGAAGACTTGCTATATTTGCCAGGAAATTGGCAAACCAAATCGTGCCAATGTTGGCGCCTGTA
      TGCAGTGCAACAAATCGAATTGCAAGCAGCAGTTCCACGTCACCTGCGCCCAGAGCCTTGGATTGCTCTGCGAGGAGGCT
      GGTAACTATCTGGATAATGTGAAGTACTGCGGCTACTGTCAGCACCATTACAGCAAACTGAAAAAGGGCGGCAACGTCAA
      AACAATACCTCCATATAAACCCATTCAACATGACACCTCTTCCGATTCGTGTTCGTCGCCCGAGAAGGAGATCGATTCAA
      CCATGAACTCCGCGACAACTTCGGCCACAATCATAAAGATTACCAGCAGCAGTGGCAGTGCTGGTGGCAGCAGCAATGTT
      TTGAATGCAAGCTCCAGTGCTGGAATCTCTGCTGGAAGCAGCAGTGGGAGTGGCGTATCATCTTCCGCAAAGCAGCGCAA
      GAGCAATGCATCAAGTAAATCATCTAGCAGCAGTAGCAGTAGCTCGTCATCCTCAACAGGAGGGGCTCCCAACCCCTCCT
      CGAGTTCTGTGCATTCGGGAAGTGCTAGCAATATGACAGGAGGAGGAAGTGTACTACCAGGGAGTAGCAACATCGGCAAC
      ATTAGCAATAGTTTAAACAATAATCTGCCCGGAGGCAGTTCGTCCACCAGCAGTGCTGGAAACGTGCCTGGTGGAAGTGG
      GGGAATTATATCAGCTTCGAGCGGTGGTGCTACGCAATCGACAAGCAGTCAATCGTCAACAGCACCAGGAACCACCAAAT
      CATCGGCCAGCAGTTCGAGCAGTAGTAGCAACAGCTACAAGGAGAAACATAGCAAAAGCTTAAGCAAATCCACATCCAGC
      AAGGACAAGGATGGAAAAGATAGCTCTACCAATTCAGCGAATAACAATTTCACAAATTCATCTGCATCATCAACATCTTC
      CAACTCCTCGTCGACACGAGAGAAATCCTCATCAAAGCTTTCTAAGAACAAAGACTCCAATCAAGTACCCAGTGCCACCA
      GCAGCTTAAGCACAACGAGCAGTATCAACACCCAGCCCAGTTCGTCGACTGCTACAGCTGGATCGGGCGGTACTGGGACT
      CATGTGAGCAGTTCGGCTGCCAGTGGACTTAACTCAGCTCCTTCCACAACCAATGAGCATTCAAATCATGCCCACACCCT
      TAGCACAAATGGAACCGGAGCCGGAAGCGCAGCCGGAAAGTTGCAATCAGTCAGTAATCTGAGCAACAGTAGTTCTGGTT
      TTGGATCGGATCTGCGATCAGTCAGCACATCCTCAAGCTCCACTGTGAACGACTCCACCGGAGGATTCGGTAGTAATTCG
      AATTCAGAAAGGGAGAATTTGTCAGGCGCTGGATCGTCGGCAAGCAACATGCCTGGAACAATAGCTCCTGGTACTGGTGG
      CGTATCTTCCAGTGCGGCCACTAATCTAAGCACCAATAAGGGAGGCTCTTCGTCATCGACGGCGAATAGCCTTACATCTA
      CGAGCACTTCCTCAGGCAGCTCCTCTAACTCGTCATCGAAAAAACGAAAAGCGGATTCTGCTAAGTCCACTAGCAGTATT
      TCCACCTCTGGCTCCGCTCTGGAGGATAACAATAGCTTAATATCCCGCTATGATATCAAAGATGTTCAAGTTGCACTGAC
      GCCTCTAACAGATTTTGAGAAGGAAATCGAGAAGAGCTCCAAGAGGCAACGTACCGAACTCAGCCCGCCGACCCACCAAA
      CATCCGCAACCGCCGAAGTAAATGCACCGCTGGCCAGCTCGACGAGTGCATCCATTGCGGTAACTGCGAGTGCGACGGCG
      GCATCAGCCCCTCCAGCAACGGGCACCACTACCTTAGGCAGCAGCATTAGCGGCAATGCTGGCTCAACCTCCAGCGGTAA
      CAGTTCCGGAGTATCGGCGACTGGAGGAGCACAATCCGCCGTGGGGTCTGGCGGCTATCCAAAGACAGAATCGAGCAAGT
      CGAGTGGCACCGCAAGCGCAGGCAGTGGCAGTGGCAGCAGCAGCAATACAAGTAGCACCAAGCACGGCAGCAACATCAAG
      GATATTAGCAGCAGTAGCAATCAGCAGGCATCGACTGCGAGCAGCAGTAGTGCACCCAGCCTTTATGTCTCCGTGCCACT
      GTCCACGGCCAACGTACCTGGAATCAATCTGCCCACCAGCAGCACTAGCAGTAGTACCACCAGCGAATCCCATTCGGCAT
      CGTCGCGCAGCAGTGGTGCACAATCTCAGCATCAGCAGCAGCTAAGCAATGCTTTGGTTGGTCCGCCCATGGGAGGATCC
      GCTGGGGCTTTTCATGGCGGAACAACCAGCGCTGGGTCCTCGTCGGTCATCCAGCAGCAGAGCGGCAAGTCATCGCCAGC
      TCTGGGCACGCTAGTCAGTGGCAACAGTGGTGGTAGCATAATCTCCGCCAGTGGCTTTCCACTACCGAGTGGTAATCTCA
      CTGCCACGACCACTGAGAGCGGCAACTTGAAGATCAGCTATGAGAAGCAGACGACACGAGTGCAACAATTGCAGGAGCAG
      GAGGCGCCACCGGCCAGACGCAGCAGAACGCTTGATCTGAGCACGGCAAGCGCTTCATCGTCATCGCCATCTGCAGTGCC
      CGCGACAACATCTCCCTTGGTCGTACTGAGTAACCAATTGCCACTTAACTCGGTGGCAGCAAGTAGTTCCACCGGTGGTC
      TGAAGTTTACCTACGAGAGTCAGACCCAGATGGACGTGCCCATGATGCCTGTGAGCGCCATAAAGGATTCCCCGCCCAGT
      TCGCCCGGCTCAGAGATAGGATCGGCCATGCACTCCGCAACTACTGCACCCGGTTCCCTGACTGGAGCTTCGACAGCGGC
      GACTGCTCAACCTGGAAATGTACGGAAGCGTGGACGCAAGGCCAAAGATGCGACGATAGCTGCTGCAGCGGCGGCAGCGG
      CAGCAGCAGCTGCTCTCAGCAATTCTCAACAGGATCTCAAGGATGTGCGCATACTCCAGAATGGGGCGAGCAATACACCG
      GGCAATCCAGCTGGCAGCACACCAACGCCTCCTGCTACTCCCGCTTCGTCTAATGCTGTCAGCTCAGCCAGTTCGATCAT
      TACACACACGGCCGCGCATATGCTGGGCAACCAGATCAACCCAAACAGCAGCGTGGCCCAGAAGCTGTCCGAGCAGCTGC
      ACATGGAGGTCCAGGATCACTCGATCTACACTCCCGATTCAATGAACTCGCAATACGCCGGAGTTCCGTTCCCCGGCAAG
      CAGCGTAACTCCACTGCCGTTCCTAGCAACGCCACGCCAGCTCAAAATCCGCTGCAATCGATGTTCAGCGGTGGCGGCAT
      GAACGGCAACATGCCCATTCCGCAAAGTCTGGAGCAGCTGCTGGAGCGCCAGTGGGAGCAGGGCTCGCAGTTTCTCATGG
      AGCAAGCGCAGCACTTTGACATTGCCTCGCTGCTTAATTGCTTGCACCAGCTGCAGAGCGAAAACCTCCGGCTGGAGGAG
      CATGTGACCAGCCTCATAGCGCGACGTGATCACCTGCTGGCGGTCAATGCGCGCCTGCAGATCCCGCTGAGTACCATCGC
      AAGCAACACCAAGGCCGAGGCGCATGGTAAGTAAGAGAGGGCGCCTGTTCTCTCTTGTACTTGGTGTCGGCACTTGCTGG
      CTCCAACCATGTGGCACTGGAGGAGCCCACATCCCACTTACACAGCCACTGCTCACAGACCAAATTTTGCGTTTAGTTAT
      CTGTACATCCATATTTTGTTTGGTATTCGTTGTACATACAAATTGAATCCGAGTCCAGTTCGCGTTGTAGTCTTAAGTAA
      CTTATATTAAGTTAACAACTAATCTGGTTACCAATGGTCATCCGTATAAACAAATAATGTACATATATACATACACAGCT
      GTAAATCAAATTACAGATTGTTGCACAAAAGCAGTGATTGAGAAATTATCCATTGCATTTATCGACTACATTGACAACTC
      GTCATCTTTTTAAAACGGAATGCTTCTTTACCCTTATCATCGAACCATACCACGACTAGATAACTTTACCCTTATTTATA
      CTTTTAAGTTAGTTATATGTATTTACGGAAAATACGGATCTAATTATACTTACTATTGTAACGAGATATGATTTCTTTGG
      CCAAGTTAATAGTTAAGTTCTTTGGATATTTAAAAGCAAATACTTTTCGATTTTATTTATTTACAAAATGAATAAAATGT
      TTAATATATTAAACACAAAACCAAAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: SD_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from cultured cells; cell line used was not derived the iso-1 sequenced strain.

      Sample preparation

      For the SD cDNA library, Schneider L2 cells were collected.

      Protocol

      RNA was poly(A)+ selected once. oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid. ~300,000 colonies were plated out and a mass plasmid DNA prep was done using Qiagen Plasmids containing the cDNA inserts were size selected on Sephacryl S-500 column in order to exclude plasmids with no insert. Early elutions were collected and transformed into DH5 alpha strain (Gibco/BRL).

      Comment
      Reported As
      Symbol Synonyms
      SD
      SD_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)