FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Human Disease Model Report: neurodegenerative disease, SLC25A39,40-related
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General Information
Name
neurodegenerative disease, SLC25A39,40-related
FlyBase ID
FBhh0001086
Disease Ontology Term
Parent Disease
OMIM
Overview

This report describes a model of neurodegenerative disease using the Drosophila gene Shawn. There are two human orthologs of this gene, SLC25A39 and SLC25A40, which encode mitochondrial carrier proteins. Classical loss-of-function mutations, RNAi targeting constructs, and an amorphic mutation caused by imprecise excision of a TE insertion have been generated for Dmel\Shawn.

The human Hsap\SLC25A40 gene has been introduced into flies, but has not been characterized. As of this update, human SLC25A39 has not been introduced into flies.

In a Drosophila screen for mutations resulting in defective ERG (electroretinogram) response, several mutations within the Shawn gene were recovered. The Shawn protein localizes to mitochondria; loss of function leads to an accumulation of reactive oxygen species that cause mitochondrial morphological and functional defects. Progressive neurodegeneration of photoreceptor terminals and degeneration of postsynaptic muscle cells at the larval neuromuscular junction are observed. Loss of Shawn results in increased manganese and calcium levels and an increase in mitochondrial free iron.

Several other human disease models in fly address metal toxicity and brain iron overload in neurodegenerative disease; see 'neurodegeneration with brain iron accumulation' (FBhh0000223), 'Parkinson-like disease, metal toxicity' (FBhh0000884) and 'Parkinson disease, iron overload' (FBhh0000885).

[updated Oct. 2019 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: neurodegenerative disease, SLC25A39,40-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics
Cellular phenotype and pathology
Molecular information

SLC25A40 and SLC25A39 belong to the SLC25 family of mitochondrial carrier proteins. Members of this family are encoded by the nuclear genome while their protein products are usually embedded in the inner mitochondrial membrane and exhibit wide-ranging substrate specificity. [Gene Cards, SLC25A39, SLC25A40; 2019.07.17]

External links
Disease synonyms
mitochondrial and neural dysfunction, SLC25A39,40-related
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to many: 2 human to 3 Drosophila.

Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to many: 2 human to 3 Drosophila.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    Shawn (Shawn) encodes a mitochondrial carrier involved in metal homeostasis. [Date last reviewed: 2019-09-12]
    Gene Groups / Pathways
    Comments on ortholog(s)

    Moderate- to high-scoring ortholog of human SLC25A39 and SLC25A40 (3 Drosophila to 2 human); the other Drosophila genes are CG2616 and Tyler. Dmel\Shawn shares 39-45% identity and 53-60% similarity with the human genes.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (5 groups)
      protein-protein
      Interacting group
      Assay
      References
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      Alleles Reported to Model Human Disease (Disease Ontology) (2 alleles)
      Models Based on Experimental Evidence ( 2 )
      Modifiers Based on Experimental Evidence ( 0 )
      Allele
      Disease
      Interaction
      References
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      ethyl methanesulfonate
      ethyl methanesulfonate
      amorphic allele - molecular evidence
      P-element activity
      References (3)