FB2026_03 , released September 17, 2026
Human Disease Model Report: Warburg micro syndrome 2
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General Information
Name
Warburg micro syndrome 2
FlyBase ID
FBhh0001310
Disease Ontology Term
Parent Disease
Overview

This report describes Warburg micro syndrome 2 (WARBM2), a subtype of Warburg micro syndrome; WARBM2 exhibits autosomal recessive inheritance. The human gene implicated in this disease is RAB3GAP2, which encodes the regulatory subunit of the RAB3GAP complex; the RAB3GAP complex regulates several classes of Rab GTPases, including RAB18. There is a single orthologous gene in Drosophila, Rab3-GAP,for which a number of genetic reagents have been generated, including RNAi-targeting constructs, alleles caused by insertional mutagenesis, and a targeted CRISPR knockout construct.

The human RAB3GAP2 has not been introduced into flies.

Animals hemizygous for a strong loss-of-function allele of Dmel\Rab3-GAP exhibit a progressive locomotor-defective phenotype. Subcellular localization of Rab3-GAP and impact on autophagic processes have been characterized and compared with similar assays for Dmel\Rab18. These data suggest that the Rab3GAP‐Rab18 module regulates autolysosomal maturation.

[updated Feb. 2021 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: Warburg micro syndrome
Symptoms and phenotype

Warburg Micro syndrome is a rare autosomal recessive syndrome characterized by microcephaly, microphthalmia, microcornea, congenital cataracts, optic atrophy, cortical dysplasia, in particular corpus callosum hypoplasia, severe mental retardation, spastic diplegia, and hypogonadism (summary by Morris-Rosendahl et al., 2010; pubmed:20512159). [from MIM:600118; 2021.02.02]

Specific Disease Summary: Warburg micro syndrome 2
OMIM report

[WARBURG MICRO SYNDROME 2; WARBM2](https://omim.org/entry/614225)

Human gene(s) implicated

[RAB3 GTPase-ACTIVATING PROTEIN, NONCATALYTIC SUBUNIT; RAB3GAP2](https://omim.org/entry/609275)

Symptoms and phenotype

Martsolf syndrome (MIM:212720), a clinically overlapping but milder disorder, is also caused by mutation in the RAB3GAP2 gene. [from MIM:614225; 2021.02.02]

Genetics

Micro syndrome-2 (WARBM2) is caused by homozygous mutation in the RAB3GAP2 gene. [from MIM:614225; 2021.02.02]

Cellular phenotype and pathology
Molecular information

RAB3GAP2 encodes a regulatory subunit of a GTPase-activating protein (GAP) complex that has specificity for Rab3 subfamily. [Gene Cards, RAB3GAP2; 2021.02.02]

RAB3GAP1 and RAB3GAP2 form a binary 'RAB3GAP' complex that functions as a guanine-nucleotide exchange factor (GEF) for RAB18. Warburg Micro syndrome can be caused directly by loss of RAB18, or indirectly through loss of RAB18 regulators RAB3GAP1,2 or TBC1D20. (Handley et al., 2015; pubmed:26063829).

The Rab3GAP1,2 complex acts as a bivalent Rab regulator: In addition to its GEF function toward Rab18, it also serves as a GAP for Rab3 (FBrf0247573 and references cited therein).

External links
Disease synonyms
micro syndrome 2
WARBM2
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one: 1 human gene to 1 Drosophila gene.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Groups / Pathways
        Comments on ortholog(s)

        High-scoring ortholog of human RAB3GAP2 (1 Drosophila to 1 human). Dmel\Rab3-GAP shares 28% identity and 46% similarity with the human gene.

        Orthologs and Alignments from DRSC
        DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
        Other Genes Used: Viral, Bacterial, Synthetic (0)
          Summary of Physical Interactions (1 groups)
          protein-protein
          Interacting group
          Assay
          References
          pull down, peptide massfingerprinting
          Alleles Reported to Model Human Disease (Disease Ontology) (3 alleles)
          Models Based on Experimental Evidence ( 3 )
          Modifiers Based on Experimental Evidence ( 0 )
          Allele
          Disease
          Interaction
          References
          Alleles Representing Disease-Implicated Variants
          Genetic Tools, Stocks and Reagents
          Sources of Stocks
          Contact lab of origin for a reagent not available from a public stock center.
          Bloomington Stock Center Disease Page
          Related mammalian, viral, bacterial, or synthetic transgenes
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila transgenes
          Allele
          Transgene
          Publicly Available Stocks
          RNAi constructs available
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila classical alleles
          Allele
          Allele class
          Mutagen
          Publicly Available Stocks
          References (4)