FB2026_03 , released September 17, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000082595
Interaction Network
Interactions Browser links
pnut network
Septin2 network
Reported Interactions
FBrf0087109-2.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

SEP2

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Proteins immunopurified from embryonic high-speed supernatant.

pnut, Sep1 and Sep2 copurify in about a 1:1:1 stoichiometry.

Source was embryos of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0087109-4.CS.MW
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

neutral component
pnut 

Pnut

neutral component
pnut 

Pnut

neutral component

SEP2

neutral component

SEP2

neutral component

SEP2

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Proteins immunopurified from embryonic high-speed supernatant using anti-pnut antibody, then subjected to gradient fractionation.

pnut, Sep1 and Sep2 cosediment as a complex at about 8S in a 1:1:1 stoichiometry.

Source was embryos of wild-type fly line; proteins produced from endogenous gene.

FBrf0087109-7.CH.MW
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

neutral component
pnut 

Pnut

neutral component
pnut 

Pnut

neutral component

SEP2

neutral component

SEP2

neutral component

SEP2

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Proteins immunopurified from embryonic high-speed supernatant using anti-pnut antibody, then subjected to gel filtration chromatography.

pnut, Sep1 and Sep2 copurify as a complex at about a 1:1:1 stoichiometry.

Source was embryos of wild-type fly line; proteins produced from endogenous gene.

FBrf0144953-2.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

fused to LexA DNA-binding domain

Sep2

prey

fused to B42 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
C-terminal region
sufficient binding region
aa 288-419

coordinates relative to Sep2-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast LexA-BD/B42-AD

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey from embryo cDNA expression library).

6 Sep2 clones obtained in the pnut screen.

FBrf0144953-8.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Sep2

bait

fused to LexA DNA-binding domain

pnut 

Pnut

prey

fused to B42 activation domain

pnut 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pnut 
C-terminal region
sufficient binding region
aa 431-539

coordinates relative to pnut-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast LexA-BD/B42-AD

8 pnut clones obtained from the Sep2 screen.

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey from embryo cDNA expression library).

FBrf0218395-8941.DPiM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 
unspecified role
pnut 
unspecified role
pnut 
unspecified role
unspecified role
unspecified role
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

HGScore = 477.34429

FBrf0221463-2.coIP.WB
Reference
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

Sep2

prey

GFP tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of transgenic fly line; bait produced from tagged transgenic construct; prey produced from transgenic constructendogenous gene.

FBrf0224592-4.PD.MS
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

Strep tag

DSep2

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced as a recombinant fusion protein in bacterial system.

Sep1, Sep2 and pnut were coexpressed and purified by sequential His then Strep affinity purifications.

FBrf0227131-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

His tag

Sep2

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of baculovirus-infected cell line; bait produced from transfected construct; prey produced from transfected construct.

Mutations to the GTPase domains of pnut (K155A, D206A, K288A) or Sep2 (K56A, D102A, K186A) do not affect the interaction.

FBrf0227131-4.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

[35]S label

pnut 

Sep2

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pnut 
C-terminal region
necessary binding region
aa 461-539
coiled coil domain
necessary binding region
aa 327-419
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced and labeled by in vitro translation; prey produced and labeled by in vitro translation.

FBrf0237546-2.PD.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

His tag

Sep2

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in baculovirus and insect cell system; prey produced in baculovirus and insect cell system.

FBrf0237546-4.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pnut 

Pnut

bait

FLAG tag

Sep2

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

FBrf0242141-1.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

dSEPT2

bait

GFP tag

pnut 

dSEPT7

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was larval CNS of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (8)