FB2026_03 , released September 17, 2026
Physical Interaction report
Open Close
General Information
Interaction Type
physical association
Interacting Genes
ebd1, pan
FlyBase ID
FBig0000095254
Interaction Network
Interactions Browser links
ebd1 network
pan network
Reported Interactions
FBrf0213544-12.coIP.WB
Reference
Benchabane et al., 2011
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pan 

HMG C-clamp

bait

GST tag

pan 
ebd1 

Ebd1

prey

FLAG tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pan 
HMG and C-clamp
unspecified role
aa 271-408
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

GST pull down.

(Benchabane et al., 2011)

Bait expressed and purified from bacteria.

(Benchabane et al., 2011)

Prey expressed in transfected HEK293T cells.

(Benchabane et al., 2011)
FBrf0213544-3.PD.WB
Reference
Benchabane et al., 2011
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pan 

HMG C-clamp

bait

GST tag

pan 
ebd1 

Ebd1

prey

His tag, V5 tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pan 
HMG and C-clamp
unspecified role
aa 271-408
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

GST pull down.

(Benchabane et al., 2011)

Bait expressed and purified from bacteria.

(Benchabane et al., 2011)

Prey expressed and purified from bacteria.

(Benchabane et al., 2011)
FBrf0213544-5.PD.WB
Reference
Benchabane et al., 2011
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ebd1 

Ebd1

bait

GST tag

ebd1 
pan 

dTCF

prey

Myc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ebd1 
CENPB domain
unspecified role
aa 188

necessary: the ebd1[QF1] I188F mutation abolishes interaction

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

GST pull down.

(Benchabane et al., 2011)

Bait expressed and purified from bacteria.

(Benchabane et al., 2011)

Prey expressed in transfected HEK293T cells.

(Benchabane et al., 2011)
FBrf0213544-8.coIP.WB
Reference
Benchabane et al., 2011
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ebd1 

Ebd1

bait

FLAG tag

pan 

dTCF

prey

Myc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait expressed in transfected HEK293T cells.

(Benchabane et al., 2011)

Prey expressed in transfected HEK293T cells.

(Benchabane et al., 2011)
External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (1)