FB2026_02 , released June 18, 2026
FB2026_02 , released June 18, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000099040
Interaction Network
Interactions Browser links
fs(1)K10 network
egl network
Reported Interactions
FBrf0208220-11.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

SA tag

egl 

Egl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
TLS
mutation disrupting interaction
nt 6nt 33-39

UC6

Δ33, Δ39

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro transcription; prey derived from wild-type embryonic extract.

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads.

FBrf0208220-16.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

SA tag

egl 

Egl

prey

[35]S label

egl 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
TLS
mutation disrupting interaction
nt 6nt 33-39

UC6

Δ33, Δ39

egl 
region
sufficient binding region
aa 1-814

shorter forms did not bind RNA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro transcription; prey produced and labeled by in vitro translation.

egl binds to the fs(1)K10 TLS localization signal directly, despite lacking a canonical RNA-binding motif. Neither BicD nor dynein light chain bind RNA directly in this assay.

Mutation of two residues essential for putative exonuclease activity has no effect on binding of egl to fs(1)K10 TLS RNA.

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads.

FBrf0208220-17.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

SA tag

egl 

Egl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro transcription; prey produced as a recombinant fusion protein in yeast system.

Recombinant egl, or an egl-BicD complex, can bind the fs(1)K10 TLS.

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads.

FBrf0208220-19.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
egl 

Egl

bait

K10

prey

[32]P label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in yeast system; prey produced and labeled by in vitro transcription.

A recombinant egl-BicD complex binds the fs(1)K10 TLS.

FBrf0208220-9.PD.MS
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

SA tag

egl 

Egl

prey

30 unique peptides

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro transcription; prey derived from wild-type embryonic extract.

BicD and egl were the only proteins pulled down consistently and specifically with wild-type localization signals from fs(1)K10 (TLS), grk (GLS), h (SL1) and I-element (ILS).

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads.

FBrf0222317-1.PD.MS
Reference
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

TRAP tag

egl 

Egl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
TLS
mutation disrupting interaction
nt 6nt 33-39

UC6

Δ33, Δ39

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro transcription; prey derived from wild-type embryonic extract.

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads. Less stringent wash conditions were used in these purifications (compared to a previous study, FBrf0208220).

FBrf0222317-24.PD.WB
Reference
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

TRAP tag

egl 

Egl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
TLS
mutation disrupting interaction
nt 6nt 33-39

UC6

Δ33, Δ39

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bait RNA was pulled down by virtue of an RNA aptamer tag with high affinity for streptavidin beads. Less stringent wash conditions were used in these purifications (compared to a previous study, FBrf0208220).

egl and BicD are able to interact with RNA localization signals in the absence of Lis-1.

Interaction in vitro; bait produced by in vitro transcription; prey derived from wild-type embryonic extract.

FBrf0234579-27.coIP.SEQ
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
egl 

Egl

bait

GFP tag

fs(1)K10

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

FBrf0248715-2.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

TLS

bait

biotin label

egl 

EGL

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced and labeled by in vitro transcription; prey produced and labeled by in vitro translation.

Positive control.

FBrf0250118-3a.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

K10

bait

SA tag

egl 

Egl

prey

FLAG tag

egl 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
TLS
sufficient binding region
CUUGAUUGUAUUUUUAAAUUAAUUCUUAAAAACUACAAAUUAAG
egl 
2pt interaction domain residues 965 and 969
mutation decreasing interaction
aa 965 and 969

S965K and S969R; coordinates relative to egl-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

egl binds to the fs(1)K10 TLS localization signal directly.

Endogenous egl was depleted with shRNA. Bait RNA was pulled down by an RNA aptamer tag with high affinity for streptavidin beads. Introduction of a yeast leucine zipper to restore dimerization of egl 2pt mutant artificially, restores interaction with fs(1)K10.

Interaction in vitro; bait produced by in vitro transcription; prey derived from transgenic adult female ovary extract.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (5)