FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Physical Interaction report
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General Information
Interaction Type
physical association
Interacting Genes
msl-3, lncRNA:roX1
FlyBase ID
FBig0000103299
Interaction Network
Interactions Browser links
msl-3 network
lncRNA:roX1 network
Reported Interactions
FBrf0191180-7.coIP.NB
Reference
Mendjan et al., 2006
Description
physical association
Assay
Collection
Source/Stage
organism / embryonic stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
msl-3 

MSL3

bait

FLAG tag

lncRNA:roX1 

roX1

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Positive control.

(Mendjan et al., 2006)

Source was embryos of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

(Mendjan et al., 2006)
FBrf0226202-2.PD.WB
Reference
Quinn et al., 2014
Description
physical association
Assay
Collection
Source/Stage
Cell line used
CME-W1-Cl.8+
Participants
Corresponds to
Reported as
Role
Note
lncRNA:roX1 

roX1

bait
msl-3 

MSL3

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait oligonucleotides synthesized in vitro; prey derived from clone 8 cell extract.

(Quinn et al., 2014)

The authors use biotin-tagged oligonucleotides complementary to roX1 to pull down associated factors (protein, RNA or DNA) from cross-linked chromatin.

(Quinn et al., 2014)
External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (2)