FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Assay: RNA-Seq_mE3623_Dsim_AM
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General Information
Name
RNA-Seq_mE3623_Dsim_AM
Species
D. simulans
Assay type
FlyBase ID
FBlc0001111
Project
Data Provider
Title
RNA-Seq of D. simulans, adult male.
Biosample Source
Overview
Strain
Other tissues studied
Cell component
Cell line
Key genes
Methods
Sample preparation

Flies were raised in incubators with no photoperiod at 22 C and 60% humidity. Adults were aged 5-7 days post-eclosion and sorted by sex.

Biosamples used (1)
Biosample
Type
Title
D. simulans, adult male, source for RNA.
Assay Details
Key genes
Protocol

mRNA was purified from total RNA using a QIAGEN Oligotex mRNA kit (Valencia, California). mRNA quality and quantity was determined by Bioanalyzer (Agilent, Santa Clara, California) and 260/280 ratio from Nanodrop ND-1000 UV spectrophotometer. Double-stranded cDNAs were made from mRNA using the Superscript II (Invitrogen) and random hexamer primers (Invitrogen). DNA fragment libraries were prepared for sequencing by addition adaptor oligonucleotides; cDNA templates were size-selected by gel purification (300bp +/- 25bp), then amplified by PCR using oligo-specific primers and Phusion polymerase. The amplified product was purified using a QIAquick column.

Mode of Assay

Read length (bases):75

Comments
Associated Data
Size
Files
Additional Information
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
RNA-Seq_mE3623_Dsim_AM
modENCODE_3623
Name Synonyms
RNA-Seq of D. simulans, adult male.
Secondary FlyBase IDs
    References (3)