FB2026_02 , released June 18, 2026
Assay: ChIP-chip_mE3674_CTCF_RNAi_su(Hw)_ML-DmBG3-c2
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General Information
Name
ChIP-chip_mE3674_CTCF_RNAi_su(Hw)_ML-DmBG3-c2
Species
D. melanogaster
Assay type
ChIP-chip
FlyBase ID
FBlc0001940
Project
Data Provider
Title
ChIP-chip of CTCF in D. melanogaster, ML-DmBG3-c2 cell line, su(Hw) knockdown.
Accessions
Biosample Source
Overview
Strain
Stage
Sex
Tissue isolated
Other tissues studied
Cell component
Cell line
ML-DmBG3-c2
(modENCODE Data Coordination Center et al., 2012)
Key genes
(RNAi_target)
Methods
gene perturbation
(modENCODE Data Coordination Center et al., 2012)
Sample preparation
Biosamples used (1)
Biosample
Type
Title
BS_mE3674
immortalized cell line
D. melanogaster, ML-DmBG3-c2 cell line, su(Hw) knockdown, source for ChIP.
Assay Details
Methods
Key genes
(bait_protein)
Protocol

A guinea pig polyclonal anti-CTCF (Corces lab) antibody was used for ChIP.

(modENCODE Data Coordination Center et al., 2012)
Mode of Assay
Comments
Associated Data
Size
Files
Additional Information
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
ChIP-chip_mE3674_CTCF_RNAi_su(Hw)_ML-DmBG3-c2
modENCODE_3674
Name Synonyms
ChIP-chip of CTCF in D. melanogaster, ML-DmBG3-c2 cell line, su(Hw) knockdown.
(modENCODE Data Coordination Center et al., 2012)
Secondary FlyBase IDs
    References (2)