Biosample: BS

General Information

Name

BS_mE2603

Species

D. melanogaster

Biosample type

whole organism

FlyBase ID

FBlc0003324

Project

modENCODE_regulation_TFs

Title

D. melanogaster, eve-YFP, embryo (1-6 hr AEL), source for ChIP.

Accessions

Genetic Background

Strain

Genotype

eve[R13] ; P{S2E.wt.eve.YFP}attP2

(Negre et al., 2011)

Key genes

(transgene_used)

Source Material

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 3 -- 11

organism

Comment: 1-6 hr AEL

(Negre et al., 2011)

Cell line

Other tissues studied

Other species studied

Biosample Details

Methods

Allele used

eve³

Insertion used

P{S2E.wt.eve.YFP}attP2

Sample preparation

Comments

Files

Additional Information

Related Datasets

Parent projects (1)

Projects

Type

Title

modENCODE_regulation_TFs

genome binding

Genome-wide localization of transcription factors by ChIP-chip and ChIP-Seq.

Raw data generated from this biosample (1)

Assay

Type

Title

ChIP-chip_mE2603_eve_E3-11

ChIP-chip

ChIP-chip of eve in D. melanogaster, eve-YFP, embryo (1-6 hr AEL).

Processed data generated from this biosample (2)

Result

Type

Title

mE1_TFBS_eve

binding site identification

eve binding sites (peak calls) identified by ChIP-chip in embryos.

mE1_TFBS_HSA

binding site identification

Transcription factor hot spots (high occupancy sites) identified by ChIP of 41 factors in embryos.

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

BS_mE2603

Name Synonyms

D. melanogaster, eve-YFP, embryo (1-6 hr AEL), source for ChIP.

(Negre et al., 2011)

Secondary FlyBase IDs

References (2)

Report Sections

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