FB2026_03 , released September 17, 2026
Assay: scRNAseq_2020_Zappia_mCherryRNAi_seq
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General Information
Name
scRNAseq_2020_Zappia_mCherryRNAi_seq
Species
D. melanogaster
Assay type
FlyBase ID
FBlc0003824
Project
Data Provider
Title
Single-cell RNA-seq of cells from wing imaginal discs upon mCherry knockdown
Accessions
    Biosample Source
    Overview
    Strain
    Sex
    Tissue isolated
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Sample preparation

    Wandering third instar larvae expressing Disc\RFPdsRNA.mCherry.UAS.VALIUM20 under the control of Scer\GAL41151 were harvested between 110 and 135 h after egg-laying. The notum and hinge regions of wing discs were dissected and cells were dissociated with collagenase and trypsin in Rinaldini solution.

    Biosamples used (1)
    Biosample
    Type
    Title
    Cells from wing imaginal discs upon mCherry knockdown
    Assay Details
    Key genes
    Protocol

    Single-cell RNA-seq libraries were prepared using the DROP-seq method (Macosko et al., 2015).

    Mode of Assay

    RNA-seq libraries were sequenced on the Illumina NextSeq platform.

    Comments
    Associated Data
    Size
    1922638 reads
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2020_Zappia_mCherryRNAi_seq
    Name Synonyms
    Single-cell RNA-seq of cells from wing imaginal discs upon mCherry knockdown
    Secondary FlyBase IDs
      References (1)