FB2026_03 , released September 17, 2026
Result: scRNAseq_2023_Saavedra_REPTOR_seq_clustering
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General Information
Name
scRNAseq_2023_Saavedra_REPTOR_seq_clustering
Species
D. melanogaster
Result type
FlyBase ID
FBlc0006392
Project
Data Provider
Title
Clustering analysis of dissociated cells from REPTOR-overexpressing adult male thoraces
Status
Current
Accessions
    Biosample Source
    Overview
    Strain
    Other tissues studied
    Cell component
    Cell line
    Key genes
    Sample preparation

    The thoraces from thirty adult males were dissected and homogenized. Cells were mechanically dissociated and about ten thousand nuclei per genotype were collected.

    Biosamples analyzed by this result (1)
    Biosample
    Type
    Title
    Dissociated cells from REPTOR-overexpressing adult male thoraces
    Data Analyzed
    Key genes
    Protocol
    Mode of Assay
    Raw Data Analyzed (1)
    Assay / Reagent collection
    Type
    Title
    Single-nucleus RNA-seq of dissociated cells from REPTOR-overexpressing adult male thoraces
    Processed Data Analyzed (0)
    Result
    Type
    Title
    Analysis
    Reference Genome
    Reference Annotation
    Data analysis

    Reads were processed using Cell Ranger v7.0.0 (10x Genomics). Further analysis was performed with Seurat v4.3.0. For quality filtering, cells less than 100 UMIs or less than 100 genes were removed. After UMAP dimensionality reduction, clustering analysis was performed with a resolution of 0.3 and clusters were annotated by comparing the top markers with data from the Fly Cell Atlas dataset.

    Comments
    Associated Data
    Size
    Files
    Additional Information
    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    scRNAseq_2023_Saavedra_REPTOR_seq_clustering
    Name Synonyms
    Clustering analysis of dissociated cells from REPTOR-overexpressing adult male thoraces
    Secondary FlyBase IDs
      References (1)