Subject: cmg vs Caki
Hi All,
.
Celera cmg (AE003736; AAF55920.1) and Celera Caki (AE003736; AAF55922.1) do
not show the same sequence similarities as the published sequence of each
gene (U53190 and X94264) and using GeneScene there even appears to be a
gene between them: CG13413. The sequence of this central gene does not
align to either published sequence either.
.
The Celera and published sequence of each gene are quite different.
For cmg the Celera gene aligns only to the C terminal fragment,
frameshifts accounting for the later Init Met and for Caki the Celera
gene aligns to the N terminus, frameshifts providing an early
termination codon.
.
thanks
Eleanor