Gene or accession: CG7901
Gene annotation error
Gene CG7901 corresponds to AJ277140 (PP2A-B')
Comments: PP2A-B' (accession number AJ277140, RNA sequence) corresponds to
CG7901
(FBgn0038572) and also to CG7913 (FBgn0038573), because:
1. BLAST of whole genome sequence using AJ277140 overlaps with the
region of the genome that includes CG7901 AND CG7913.
2. ClustalW alignment of CDS sequences of AJ277140 and CG7901 (both
isoforms) gives a good alignment \- basically the whole of either
isoform of CG7901 overlaps with the first 190 approx amino acid
residues of the AJ277140 (PP2A-B') sequence.
Nucleotides 1-650 approx of AJ277140 (PP2A-B') align with nucleotides
290-930 approx of CG7901 (CG7901 is 937 nucleotides long).
I am therefore confident that CG7901 corresponds to the N-terminal part
of PP2A-B', although the annotation of the CG7901 transcript is
different from the structure of the relevant part of the PP2A-B'
transcript.
3. I think that CG7913 corresponds to the C-terminal part of
PP2A-B'.
a. there is good nucleotide ClustalW alignment of nucleotides 650-2250
approx of AJ277140 (PP2A-B') with nucleotides 1680-3349 approx of
CG7913 (CG7913 is 3349bp long) , suggesting that CG7913 corresponds to
the C-terminal part of PP2A-B'. Also CG7913 is annotated as a protein
phosphatase.
I did a BLAST of the CDS sequence of PP2A-B' (Q9NFM7) and amino acid
residues 190-369 approx of PP2A-B' align with amino acid residues
470-650 approx of CG7913 (CG7913 is 661 amino acids long).
The transcript \+ CDS structure of CG7913 differs from that of the
relevant part of PP2A-B'.
CG7901 \+ CG7913 therefore need merging in to one annotation (which
corresponds to PP2A-B'), and the intron/exon structure may well need
changing,
here are ClustalW alignments \+ BLAST for error report,
Gillian
Pairwise Scores:
CLUSTAL W (1.81) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: DME277140 2250 bp
Sequence 2: >CG7913|FBgn0038573|cDNA 3349 bp
Start of Pairwise alignments
Aligning...
Sequences ( 1:2 ) Aligned. Score: 70
Guide tree file created:
/net/nfs0/vol1/production/w3nobody/tmp/933704.603436-16722.dnd
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences: 2  Score:35637 
Alignment Score 13114
CLUSTAL-Alignment file created
/net/nfs0/vol1/production/w3nobody/tmp/933704.603436-16722.aln
Your guide tree:
933704.603436-16722.dnd
( DME277140:0.14644 ,>CG7913|FBgn0038573| cDNA:0.14644 );
Your Multiple Sequence Alignment:
933704.603436-16722.aln
CLUSTAL W (1.81) multiple sequence alignment
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
ACCGTGAACGTCGTGTGCCCCGAAAACTTTAATATTAGTTGAAAATATTC 50
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GTTTCCCAAGTTAATTGCTCTCCTATCCTATTCCCTCATTTGTTCCCATT 100
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
CGAACCATTCTATAGTTTCATACTTAGCGTGCCCAAATTGAGTTTCTAGT 150
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GTAGTCTTTCTCATGTGTTGTTGTTGGTCGGCGGGGGCGGCTGGTAAAAA 200
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
AAACAAGCGTTCCGTATCAAGATTAAAACCGAGTGCCATTTGCTCCAAGT 250
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GCCGGCACTAATGAGATGGTCTTCGGTGCTATGTTGCTGACGGGCAACGG 300
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GCTCAAAGGTCCCAAACAGCAGCAACAGCAACATCAGCAGGAGCCGCAGC 350
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
AGCAGCAGCAGCAATCGCAACAGCAGCAGCAAGAGCAAAAGAAACCGGCG 400
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
CCCATTAAATCCTCCAGCAAGGAGCAGGAAACGCAGCCCATTGCAGCCGG 450
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GTATTATGCCCTCGGCATACGCATACCCAAATCTCCATCGTTTCACAGCG 500
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GCCTAGATCAGCTGGCCGACGACGAGTTGGACGATCAGGTGCAGGATCAG 550
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
CAGCAGGAGCAGCAACAGACCGGCAGCCGATTCAGGTTTAGCAGCGTGGA 600
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GGAGCTAAAGGCCAAGTTCGAGGGGCGGAAAACGCCCCTCTCACCGCCAG 650
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
AGGCAGCAGCAGGAGGAGCAGCCGGATCCGGAGCACCCACCACATCCTCC 700
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
TCACCATCGTCCTCGTCCACCAGCTCCAATTCGTCGGCCTCGGCCCTGTC 750
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
CTCGCTTTCACAGGCGGCCTCATCCTCGCTAGCCTCGGCGGCTGCTAACT 800
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
CCTCGGCCTCATCCTCGGCCGCCACATACGGTGGTGGAGCGAATTCGGCT 850
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
GCAGCTGCACTGATTGCCTCCTCGCCATTTGGATCGCAGTCCTCCACTTC 900
DME277140
\--------------------------------------------------
>CG7913|FBgn0038573|cDNA
TTCGCTCTCGCTATCCTCGAATGCCGGCATGTCGAAGAACGCGGCAGGAG 950
DME277140
\-------------------------------------------TCGGTAT 7
>CG7913|FBgn0038573|cDNA
CAGGATCTGGATCTGGATCTGGAACAACGTCAACGGGCGCTGCTAGCGGC 1000
\* \*
DME277140
AAAAAACCAAAAACACACATAGAGG-AGAGCACATCCAAAGAGCCAAAAA 56
>CG7913|FBgn0038573|cDNA
AGCAATTCACTTGTGTCCACTTTGGCACAACATTTCTCGGCGGCCACATC 1050
\**** \*
DME277140
GAGT-CAGAACCGATTGCG--TATTATGGATAACGAGGCGTTAGATCCAA 103
>CG7913|FBgn0038573|cDNA
CGCCGCAGCATCGGCGGCAGCCGCTGCGGCATCCTCTGCCTCGGCGGCGT 1100
\* \* \*
DME277140
CAATAAAAAGCAGTACGTCGGCAGCGAC-GCCAACAGCAGCAGCATCAGA 152
>CG7913|FBgn0038573|cDNA
CCTCCTCGTCAGCTTCCTCCTCATCCACCGCCACCAACAACGCAGCCAGC 1150
DME277140
AACGACAACAACAGCAGCATCTTCAGTTGTGGAAACCACAACAACAATCG 202
>CG7913|FBgn0038573|cDNA
AGCTCCATCGCCGCCAGCAAGT-CACCTGTGAGCGCGGCCGCGGCCATAA 1199
\* \* \** \* \* \***** \* \** \**** \*
DME277140
CGG-CGGCCACAGCCTCAGCGGCAGAATCAAAA--AACGAAACAACGGCC 249
>CG7913|FBgn0038573|cDNA
AGAACATACTGAATGCCACCAAGAGTGTGGGTACTAGTGCTGCGGCGGCG 1249
\* \* \* \* \** \* \** \* \* \*
DME277140
ACAAACAACAATAGCAACACAAGCGGCAGCATCAGCAGTAGTAGCAGCAA 299
>CG7913|FBgn0038573|cDNA
GCAG-CAGCGGCGGCCACCTCCTCCTCATCATCCCCATCCTCTGCGGCGG 1298
DME277140
CAATATAGTCAT--ACCGGCATCG-----GCCACTAACGGTATCA--AAG 340
>CG7913|FBgn0038573|cDNA
CTGTGCCGTCGTCCGCCGCCACCGCCGTCGCCGCTGTTCCCACCACCAGC 1348
\* \** \*
DME277140
AGAGTAACAGTAACTTAAGTACAAC-AACAACAGC--AGCAGCAGT--AG 385
>CG7913|FBgn0038573|cDNA
GATGTGCCCGCAGAGGAGATGCGTCCGACGGTGGCCCAGAATCTGGTGGG 1398
\** \* \* \* \*
DME277140
CGGCAGCAACAACTGTAGAAGGAGTAGCTCCAGCAATAACGTC-CACAAT 434
>CG7913|FBgn0038573|cDNA
CGGCATTAGCATCTCATTGGGAATTGGCCAGCGCAATGGCGGCGCAGCAC 1448
\** \* \** \*
DME277140
CGTGGTGACCGGCGGCACT-----CCTCCATTG--AGCAGTTTGGCTAAC 477
>CG7913|FBgn0038573|cDNA
CTGCGTCATCAGCAGTAATGGTGACACCTAACGCCACCATGGTGGTGACC 1498
\* \** \* \* \** \* \* \* \* \* \* \*
\* \** \*** \* \*
DME277140
AAACTCAAGGACAACACACCACCGTACGATGCACCGCCGCCCACGCCGAT 527
>CG7913|FBgn0038573|cDNA
ACATCGAGCCTAAGCATCCGGCAGAACGGTGACATACTGCC-GGGTCATC 1547
\* \* \* \* \** \* \* \* \*** \** \*
\*** \* \*
DME277140
CAGCAAGGTCCTGAACATCACC---GGCACCCCGATCGTTCGCAAG---- 570
>CG7913|FBgn0038573|cDNA
CGGCGGGTCTTCAGCCCTCGCCCCAGACGCTCCAACAGCTGACGGGCAGT 1597
\* \** \* \* \** \** \* \* \* \** \*
\* \* \* \*
DME277140
\----GAGAAGCGCCAGACCAGCGCCCGGTACA-ATGCCTCCAAGAACTGC 615
>CG7913|FBgn0038573|cDNA
CCGGGAAGGGCTCGCGACCGGAATCTATTCTACACGCCACCCACCGCTTC 1647
\** \* \** \*
DME277140
GAAC-TGACGGCCCTCATTCCGCTAAACGAGAAGACCGCCGCCAGTGAAC 664
>CG7913|FBgn0038573|cDNA
GGTTGCCATGGCGCTGCCTGCACT--GCGAGA-GACCGCCGCCAGTGAAC 1694
DME277140
GTGAGGAGCTGTTCATACAGAAGATCCAGCAATGCTGCACACTGTTCGAC 714
>CG7913|FBgn0038573|cDNA
GTGAGGAGCTGTTCATACAGAAGATCCAGCAATGCTGCACACTGTTCGAC 1744
DME277140
TTCTCCGAGCCGCTCAGCGACCTCAAGTTCAAGGAGGTGAAGCGGGCGGC 764
>CG7913|FBgn0038573|cDNA
TTCTCCGAGCCGCTCAGCGACCTCAAGTTCAAGGAGGTGAAGCGGGCGGC 1794
DME277140
TCTGCACGAAATGGTCGATTTCCTCACCAACCAAAATGGCGTAATAACCG 814
>CG7913|FBgn0038573|cDNA
TCTGCACGAAATGGTCGATTTCCTCACCAACCAAAATGGCGTAATAACCG 1844
DME277140
AAGTTATTTACCCGGAGGCGATCAATATGTTTGCTGTCAACCTTTTCCGA 864
>CG7913|FBgn0038573|cDNA
AAGTTATTTACCCGGAGGCGATCAATATGTTTGCTGTCAACCTTTTCCGA 1894
DME277140
ACTCTGCCGCCATCTTCCAACCCGAATGGTGCCGAATTCGATCCGGAGGA 914
>CG7913|FBgn0038573|cDNA
ACTCTGCCGCCATCGTCCAACCCGAATGGTGCCGAATTCGATCCGGAGGA 1944
DME277140
GGATGAGCCCACGTTGGAGTCCTCGTGGCCGCATCTGCAACTCGTTTACG 964
>CG7913|FBgn0038573|cDNA
GGATGAGCCCACGTTGGAGTCCTCGTGGCCGCATCTGCAACTCGTTTACG 1994
DME277140
AGCTGTTCTTGCGCTTCTTGGAGTCACCAGATTTTCAACCAAGCATGGCA 1014
>CG7913|FBgn0038573|cDNA
AGCTGTTCTTGCGCTTCTTGGAGTCACCAGATTTTCAACCAAGCATGGCA 2044
DME277140
AAACGTTTTATCGACCATCAATTTGTATTACAACTATTGGATTTATTCGA 1064
>CG7913|FBgn0038573|cDNA
AAACGTTTTATCGACCATCAATTTGTATTACAACTATTGGATTTATTCGA 2094
DME277140
TTCGGAGGATCCACGTGAACGTGATTTCCTGAAGACTGTTTTACATCGCA 1114
>CG7913|FBgn0038573|cDNA
TTCGGAGGATCCACGTGAACGTGATTTCCTGAAGACTGTTTTACATCGCA 2144
DME277140
TCTATGGAAAATTTTTGGGCTTGAGAGCATTTATTAGAAAGCAGATCAAC 1164
>CG7913|FBgn0038573|cDNA
TCTATGGAAAATTTTTGGGCTTGAGAGCATTTATTAGAAAGCAGATCAAC 2194
DME277140
AATGTCTTTTACAGA--------TTTATTTATGAAACGGAGCATCATAAT 1206
>CG7913|FBgn0038573|cDNA
AATGTCTTTTACAGACATTTAGATTTATTTATGAAACGGAGCATCATAAT 2244
DME277140
GGCATAGCCGAATTGTTGGAAATCCTGGGTAGCATTATCAATGGCTTTGC 1256
>CG7913|FBgn0038573|cDNA
GGCATAGCCGAATTGTTGGAAATCCTGGGTAGCATTATCAATGGCTTTGC 2294
DME277140
TCTGCCGCTTAAGGAGGAGCATAAACAATTTTTACTTAAGGTATTGCTGC 1306
>CG7913|FBgn0038573|cDNA
TCTGCCGCTTAAGGAGGAGCATAAACAATTTTTACTTAAGGTATTGCTGC 2344
DME277140
CATTGCACAAAGCCAAGAGCCTCTCGGTCTACCATCCGCAGCTCACCTAT 1356
>CG7913|FBgn0038573|cDNA
CATTGCACAAAGCCAAGAGCCTCTCGGTCTACCATCCGCAGCTCACCTAT 2394
DME277140
TGTGTGGTGCAGTTCCTGGAGAAGGATCCTAGCTTATCGGAGGCGGTCAT 1406
>CG7913|FBgn0038573|cDNA
TGTGTGGTGCAGTTCCTGGAGAAGGATCCTAGCTTATCGGAGGCGGTCAT 2444
DME277140
CAA----------------------------------------------- 1409
>CG7913|FBgn0038573|cDNA
CAAGTGAGTAAAGAATTCCTTATTTTGCGCATTTTCTAATTAGCCTATCG 2494
DME277140
\-------------------------AAGCCTACTTAAATTTTGGCCCAAG 1434
>CG7913|FBgn0038573|cDNA
CTGCCATATTTCAATATTCTTGCAGAAGCCTACTTAAATTTTGGCCCAAG 2544
DME277140
ACGCACAGTCCCAAGGAGGTTATGTTTTTGAACGAGCTGGAGGAGCTGTT 1484
>CG7913|FBgn0038573|cDNA
ACGCACAGTCCCAAGGAGGTTATGTTTTTGAACGAGCTGGAGGAGCTGTT 2594
DME277140
GGACGTAATTGAGCCGGCCGAGTTCCAGAAGGTGATGGTGCCGCTGTTCC 1534
>CG7913|FBgn0038573|cDNA
GGACGTAATTGAGCCGGCCGAGTTCCAGAAGGTGATGGTGCCGCTGTTCC 2644
DME277140
GCCAAATAGCCAAGTGCGTCTCTTCGCCTCATTTCCAGGTGGCCGAACGT 1584
>CG7913|FBgn0038573|cDNA
GCCAAATAGCCAAGTGCGTCTCTTCGCCTCATTTCCAGGTGGCCGAACGT 2694
DME277140
GCGTTGTACTATTGGAACAACGAGTACATTATGTCGCTGATAACGGATAA 1634
>CG7913|FBgn0038573|cDNA
GCGTTGTACTATTGGAACAACGAGTACATTATGTCGCTGATAACGGATAA 2744
DME277140
CTCGGCGGTGATATTACCCATTATGTTCCCAGCGCTCAATCGCAACTCAA 1684
>CG7913|FBgn0038573|cDNA
CTCGGCGGTGATATTACCCATTATGTTCCCAGCGCTCAATCGCAACTCAA 2794
DME277140
AGACGCACTGGAACAAGAACATCCATGGTCTGATCTACAATGCACTCAAG 1734
>CG7913|FBgn0038573|cDNA
AGACGCACTGGAACAAGACCATCCATGGTCTGATCTACAATGCACTCAAG 2844
DME277140
CTGTTCATGGAGATAGATCAGCGGCTTTTTGACGAGTGCAGCAAGAACTA 1784
>CG7913|FBgn0038573|cDNA
CTGTTCATGGAGATAGATCAGCGGCTTTTTGACGAGTGCAGCAAGAACTA 2894
DME277140
CAAGCAAGAGAAGCAGATGGAGCGTGAGAAGCTGTCGCAAAGGGAGGAGC 1834
>CG7913|FBgn0038573|cDNA
CAAGCAAGAGAAGCAGATGGAGCGTGAGAAGCTGTCGCAAAGGGAGGAGC 2944
DME277140
TCTGGCAACAGGTGGAGAGCTTGGCCAAGACCAACCCGGAGTGGACAAAG 1884
>CG7913|FBgn0038573|cDNA
TCTGGCAACAGGTGGAGAGCTTGGCCAAGACCAACCCGGAGTGGACAAAG 2994
DME277140
GCGCGCCGGTTTAACGACTGCCTGCCGGTCAGCGACAGCCGGGCCCTGTG 1934
>CG7913|FBgn0038573|cDNA
GCGCGCCGGTTTAACGACTGCCTGCCGGTCAGCGACAGCCGGGCCCTGTG 3044
DME277140
CGATCAATATAGTGAGAACAGCGATTCAGCGTATGATCAGAGCGAGCAGA 1984
>CG7913|FBgn0038573|cDNA
CGATCAATATAGTGAGAACAGCGATTCAGCGTATGATCAGAGCGAGCAGA 3094
DME277140
GGGCGCGCCAGCCGCCGCCTCCGCTGCCGCCCCAGAAACAGGCGCACCAG 2034
>CG7913|FBgn0038573|cDNA
GGGCGCGCCAGCCGCCGCCTCCGCTGCCGCCACAGAAACAGGCGCACCAG 3144
DME277140
GAGCCCCGAGAGGTGAGACAGGCACTTGCCACATTAACAACACTAAACAA 2084
>CG7913|FBgn0038573|cDNA
GAGCCCCGAGAGGTGAGACAGGCACTTGCCACATTAACAACACTAAACAA 3194
DME277140
CTACTAATCCGCCACGTGTGATCCTGGCGTCGCTGTGAGCTGTGCCCAGC 2134
>CG7913|FBgn0038573|cDNA
CTACTAATCCGCCACGTGTGATCCTGGCGTCGCTGTGAGCTGTGCCCAGC 3244
DME277140
TAAGGCCCACTCTGTTTCAACTCTAATTCTAATCGAACGAATGTCTGTTA 2184
>CG7913|FBgn0038573|cDNA
TAAGGCCCACTCTGTTTCAACTCTAATTCTAATCGAACGAATGTCTGTTA 3294
DME277140
AAATAATCACACTCATGTCATTTAAAAAAAAAA---TACATATTTGTATA 2231
>CG7913|FBgn0038573|cDNA
AAATAATCACACTCATGTCATTTAAAAAAAAAAAAATACATATTTGTATA 3344
DME277140 TCTTTAAAAAAAAAAAAAA 2250
>CG7913|FBgn0038573|cDNA TCTTT-------------- 3349
\------------------------------------------------------------------------------
--
Pairwise Scores:
CLUSTAL W (1.81) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: DME277140 2250 bp
Sequence 2: >CG7901|FBgn0038572|cDNA 937 bp
Start of Pairwise alignments
Aligning...
Sequences ( 1:2 ) Aligned. Score: 68
Guide tree file created:
/net/nfs0/vol1/production/w3nobody/tmp/274121.198283-26237.dnd
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences: 2  Score:12284 
Alignment Score 4773
CLUSTAL-Alignment file created
/net/nfs0/vol1/production/w3nobody/tmp/274121.198283-26237.aln
Your guide tree:
274121.198283-26237.dnd
( DME277140:0.15582 ,>CG7901|FBgn0038572| cDNA:0.15582 );
Your Multiple Sequence Alignment:
274121.198283-26237.aln
CLUSTAL W (1.81) multiple sequence alignment
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
GCAACGCCGCCGCACGCCTGCAGCCCTGGTAACTCTATTTTCTATTGAGC 50
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
ACCGACAACGTTGCGTGTATAAGACAGTTTACATAAATTATTATTTACAA 100
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
TTGCACAGAGCGTTGATGTTGTGCGTTCTAAGCGAAAAGTGCAAATATAA 150
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
TTTTCAGATAGCAATCAACTGAGAGCGGTCCAGCCCGGCCTGTTGTATTT 200
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
GTTTGTTTGTCCGGTTGTTTACGTTTTTTTCTCTCGTTCTCGCTGCTTTT 250
DME277140
\---------------------------------TCGGTATAAAAAACCAA 17
>CG7901|FBgn0038572|cDNA
CATACGTATTTTATATTTTGTAAAAATAAAAAATCGTTATAAAAAACCAA 300
DME277140
AAACACACATAGAGGAGAGCACATCCAAAGAGCCAAAAAGAGTCAGAACC 67
>CG7901|FBgn0038572|cDNA
AAACACACATAGAGGAGAGCACATCCAAAGAGCCAAAAAGAGTCAGAACC 350
DME277140
GATTGCGTATTATGGATAACGAGGCGTTAGATCCAACAATAAAAAGCAGT 117
>CG7901|FBgn0038572|cDNA
GATTGCGTATTATGGATAACGAGGCGTTAGATCCAACAATAAAAAGCAGT 400
DME277140
ACGTCGGCAGCGACGCCAACAGCAGCAGCATCAGAAACGACAACAACAGC 167
>CG7901|FBgn0038572|cDNA
ACGTCGGCAGCGACGCCAACAGCAGCAGCATCAGAAACGACAACAACAGC 450
DME277140
AGCATCTTCAGTTGTGGAAACCACAACAACAATCGCGGCGGCCACAGCCT 217
>CG7901|FBgn0038572|cDNA
AGCATCTTCAGTTGTGGAAACCACAACAACAATCGCGGCGGCCACAGCCT 500
DME277140
CAGCGGCAGAATCAAAAAACGAAACAACGGCCACAAACAACAATAGCAAC 267
>CG7901|FBgn0038572|cDNA
CAGCGGCAGAATCAAAAAACGAAACAACGGCCACAAACAACAATAGCAAC 550
DME277140
ACAAGCGGCAGCATCAGCAGTAGTAGCAGCAACAATATAGTCATACCGGC 317
>CG7901|FBgn0038572|cDNA
ACAAGCGGCAGCATCAGCAGTAGTAGCAGCAACAATATAGTCATACCGGC 600
DME277140
ATCGGCCACTAACGGTATCAAAGAGAGTAACAGTAACTTAAGTACAACAA 367
>CG7901|FBgn0038572|cDNA
ATCGGCCACTAACGGTATCAAAGAGAGTAACAGTAACTTAAGTACAACAA 650
DME277140
CAACAGCAGCAGCAGTAGCGGCAGCAACAACTGTAGAAGGAGTAGCTCCA 417
>CG7901|FBgn0038572|cDNA
CAACAGCAGCAGCAGTAGCGGCAGCAACAACTGTAGAAGGAGTAGCTCCA 700
DME277140
GCAATAACGTCCACAATCGTGGTGACCGGCGGCACTCCTCCATTGAGCAG 467
>CG7901|FBgn0038572|cDNA
GCAATAACGTCCACAATCGTGGTGACCGGCGGCACTCCTCCATTGAGCAG 750
DME277140
TTTGGCTAACAAACTCAAGGACAACACACCACCGTACGATGCACCGCCGC 517
>CG7901|FBgn0038572|cDNA
TTTGGCTAACAAACTCAAGGACAACACACCACCGTACGATGCACCGCCGC 800
DME277140
CCACGCCGATCAGCAAGGTCCTGAACATCACCGGCACCCCGATCGTTCGC 567
>CG7901|FBgn0038572|cDNA
CCACGCCGATCAGCAAGGTCCTGAACATCACCGGCACCCCGATCGTTCGC 850
DME277140
AAGGAGAAGCGCCAGACCAGCGCCCGGTACAATGCCTCCAAGAACTGCGA 617
>CG7901|FBgn0038572|cDNA
AAGGAGAAGCGCCAGACCAGCGCCCGGTACAATGCCTCCAAGAACTGCGA 900
DME277140
ACTGACGGCCCTCATTCCGCTAAACGAGAAGACCGCCGCCAGTGAACGTG 667
>CG7901|FBgn0038572|cDNA
ACTGACGGCCCTCATTCCGCTAAACGAGAGTGA-GTAG------------ 937
\***************************** \* \*
DME277140
AGGAGCTGTTCATACAGAAGATCCAGCAATGCTGCACACTGTTCGACTTC 717
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TCCGAGCCGCTCAGCGACCTCAAGTTCAAGGAGGTGAAGCGGGCGGCTCT 767
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCACGAAATGGTCGATTTCCTCACCAACCAAAATGGCGTAATAACCGAAG 817
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TTATTTACCCGGAGGCGATCAATATGTTTGCTGTCAACCTTTTCCGAACT 867
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CTGCCGCCATCTTCCAACCCGAATGGTGCCGAATTCGATCCGGAGGAGGA 917
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TGAGCCCACGTTGGAGTCCTCGTGGCCGCATCTGCAACTCGTTTACGAGC 967
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TGTTCTTGCGCTTCTTGGAGTCACCAGATTTTCAACCAAGCATGGCAAAA 1017
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CGTTTTATCGACCATCAATTTGTATTACAACTATTGGATTTATTCGATTC 1067
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GGAGGATCCACGTGAACGTGATTTCCTGAAGACTGTTTTACATCGCATCT 1117
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
ATGGAAAATTTTTGGGCTTGAGAGCATTTATTAGAAAGCAGATCAACAAT 1167
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GTCTTTTACAGATTTATTTATGAAACGGAGCATCATAATGGCATAGCCGA 1217
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
ATTGTTGGAAATCCTGGGTAGCATTATCAATGGCTTTGCTCTGCCGCTTA 1267
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
AGGAGGAGCATAAACAATTTTTACTTAAGGTATTGCTGCCATTGCACAAA 1317
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCCAAGAGCCTCTCGGTCTACCATCCGCAGCTCACCTATTGTGTGGTGCA 1367
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GTTCCTGGAGAAGGATCCTAGCTTATCGGAGGCGGTCATCAAAAGCCTAC 1417
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TTAAATTTTGGCCCAAGACGCACAGTCCCAAGGAGGTTATGTTTTTGAAC 1467
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GAGCTGGAGGAGCTGTTGGACGTAATTGAGCCGGCCGAGTTCCAGAAGGT 1517
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GATGGTGCCGCTGTTCCGCCAAATAGCCAAGTGCGTCTCTTCGCCTCATT 1567
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TCCAGGTGGCCGAACGTGCGTTGTACTATTGGAACAACGAGTACATTATG 1617
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TCGCTGATAACGGATAACTCGGCGGTGATATTACCCATTATGTTCCCAGC 1667
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCTCAATCGCAACTCAAAGACGCACTGGAACAAGAACATCCATGGTCTGA 1717
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TCTACAATGCACTCAAGCTGTTCATGGAGATAGATCAGCGGCTTTTTGAC 1767
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GAGTGCAGCAAGAACTACAAGCAAGAGAAGCAGATGGAGCGTGAGAAGCT 1817
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GTCGCAAAGGGAGGAGCTCTGGCAACAGGTGGAGAGCTTGGCCAAGACCA 1867
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
ACCCGGAGTGGACAAAGGCGCGCCGGTTTAACGACTGCCTGCCGGTCAGC 1917
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GACAGCCGGGCCCTGTGCGATCAATATAGTGAGAACAGCGATTCAGCGTA 1967
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TGATCAGAGCGAGCAGAGGGCGCGCCAGCCGCCGCCTCCGCTGCCGCCCC 2017
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
AGAAACAGGCGCACCAGGAGCCCCGAGAGGTGAGACAGGCACTTGCCACA 2067
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TTAACAACACTAAACAACTACTAATCCGCCACGTGTGATCCTGGCGTCGC 2117
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TGTGAGCTGTGCCCAGCTAAGGCCCACTCTGTTTCAACTCTAATTCTAAT 2167
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CGAACGAATGTCTGTTAAAATAATCACACTCATGTCATTTAAAAAAAAAA 2217
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140 TACATATTTGTATATCTTTAAAAAAAAAAAAAA 2250
>CG7901|FBgn0038572|cDNA \---------------------------------
\------------------------------------------------------------------------------
--
Pairwise Scores:
CLUSTAL W (1.81) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: DME277140 2250 bp
Sequence 2: >CG7901|FBgn0038572|cDNA 764 bp
Start of Pairwise alignments
Aligning...
Sequences ( 1:2 ) Aligned. Score: 81
Guide tree file created:
/net/nfs0/vol1/production/w3nobody/tmp/94514.17755-491.dnd
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences: 2  Score:11994 
Alignment Score 4628
CLUSTAL-Alignment file created
/net/nfs0/vol1/production/w3nobody/tmp/94514.17755-491.aln
Your guide tree:
94514.17755-491.dnd
( DME277140:0.09424 ,>CG7901|FBgn0038572| cDNA:0.09424 );
Your Multiple Sequence Alignment:
94514.17755-491.aln
CLUSTAL W (1.81) multiple sequence alignment
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
GCAACGCCGCCGCACGCCTGCAGCCCTGGTAACTCTATTTTCTATTGAGC 50
DME277140
\--------------------------------------------------
>CG7901|FBgn0038572|cDNA
ACCGACAACGTTGCGTGTATAAGACAGTTTACATAAATTATTATTTACAA 100
DME277140
\------------TCGGTATAAAAAACCAAAAACACACATAGAGGAGAGCA 38
>CG7901|FBgn0038572|cDNA
TTGCACAGAGCGTTGATGTTGTGCGTTCTAAGCGAAAA--GAGGAGAGCA 148
\* \* \* \* \** \* \* \*
DME277140
CATCCAAAGAGCCAAAAAGAGTCAGAACCGATTGCGTATTATGGATAACG 88
>CG7901|FBgn0038572|cDNA
CATCCAAAGAGCCAAAAAGAGTCAGAACCGATTGCGTATTATGGATAACG 198
DME277140
AGGCGTTAGATCCAACAATAAAAAGCAGTACGTCGGCAGCGACGCCAACA 138
>CG7901|FBgn0038572|cDNA
AGGCGTTAGATCCAACAATAAAAAGCAGTACGTCGGCAGCGACGCCAACA 248
DME277140
GCAGCAGCATCAGAAACGACAACAACAGCAGCATCTTCAGTTGTGGAAAC 188
>CG7901|FBgn0038572|cDNA
GCAGCAGCATCAGAAACGACAACAACAGCAGCATCTTCAGTTGTGGAAAC 298
DME277140
CACAACAACAATCGCGGCGGCCACAGCCTCAGCGGCAGAATCAAAAAACG 238
>CG7901|FBgn0038572|cDNA
CACAACAACAATCGCGGCGGCCACAGCCTCAGCGGCAGAATCAAAAAACG 348
DME277140
AAACAACGGCCACAAACAACAATAGCAACACAAGCGGCAGCATCAGCAGT 288
>CG7901|FBgn0038572|cDNA
AAACAACGGCCACAAACAACAATAGCAACACAAGCGGCAGCATCAGCAGT 398
DME277140
AGTAGCAGCAACAATATAGTCATACCGGCATCGGCCACTAACGGTATCAA 338
>CG7901|FBgn0038572|cDNA
AGTAGCAGCAACAATATAGTCATACCGGCATCGGCCACTAACGGTATCAA 448
DME277140
AGAGAGTAACAGTAACTTAAGTACAACAACAACAGCAGCAGCAGTAGCGG 388
>CG7901|FBgn0038572|cDNA
AGAGAGTAACAGTAACTTAAGTACAACAACAACAGCAGCAGCAGTAGCGG 498
DME277140
CAGCAACAACTGTAGAAGGAGTAGCTCCAGCAATAACGTCCACAATCGTG 438
>CG7901|FBgn0038572|cDNA
CAGCAACAACTGTAGAAGGAGTAGCTCCAGCAATAACGTCCACAATCGTG 548
DME277140
GTGACCGGCGGCACTCCTCCATTGAGCAGTTTGGCTAACAAACTCAAGGA 488
>CG7901|FBgn0038572|cDNA
GTGACCGGCGGCACTCCTCCATTGAGCAGTTTGGCTAACAAACTCAAGGA 598
DME277140
CAACACACCACCGTACGATGCACCGCCGCCCACGCCGATCAGCAAGGTCC 538
>CG7901|FBgn0038572|cDNA
CAACACACCACCGTACGATGCACCGCCGCCCACGCCGATCAGCAAGGTCC 648
DME277140
TGAACATCACCGGCACCCCGATCGTTCGCAAGGAGAAGCGCCAGACCAGC 588
>CG7901|FBgn0038572|cDNA
TGAACATCACCGGCACCCCGATCGTTCGCAAGGAGAAGCGCCAGACCAGC 698
DME277140
GCCCGGTACAATGCCTCCAAGAACTGCGAACTGACGGCCCTCATTCCGCT 638
>CG7901|FBgn0038572|cDNA
GCCCGGTACAATGCCTCCAAGAACTGCGAACTGACGGCCCTCATTCCGCT 748
DME277140
AAACGAGAAGACCGCCGCCAGTGAACGTGAGGAGCTGTTCATACAGAAGA 688
>CG7901|FBgn0038572|cDNA
AAACGAGAGTGA-GTAG--------------------------------- 764
\******** \* \*
DME277140
TCCAGCAATGCTGCACACTGTTCGACTTCTCCGAGCCGCTCAGCGACCTC 738
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
AAGTTCAAGGAGGTGAAGCGGGCGGCTCTGCACGAAATGGTCGATTTCCT 788
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CACCAACCAAAATGGCGTAATAACCGAAGTTATTTACCCGGAGGCGATCA 838
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
ATATGTTTGCTGTCAACCTTTTCCGAACTCTGCCGCCATCTTCCAACCCG 888
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
AATGGTGCCGAATTCGATCCGGAGGAGGATGAGCCCACGTTGGAGTCCTC 938
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GTGGCCGCATCTGCAACTCGTTTACGAGCTGTTCTTGCGCTTCTTGGAGT 988
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CACCAGATTTTCAACCAAGCATGGCAAAACGTTTTATCGACCATCAATTT 1038
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GTATTACAACTATTGGATTTATTCGATTCGGAGGATCCACGTGAACGTGA 1088
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TTTCCTGAAGACTGTTTTACATCGCATCTATGGAAAATTTTTGGGCTTGA 1138
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GAGCATTTATTAGAAAGCAGATCAACAATGTCTTTTACAGATTTATTTAT 1188
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GAAACGGAGCATCATAATGGCATAGCCGAATTGTTGGAAATCCTGGGTAG 1238
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CATTATCAATGGCTTTGCTCTGCCGCTTAAGGAGGAGCATAAACAATTTT 1288
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TACTTAAGGTATTGCTGCCATTGCACAAAGCCAAGAGCCTCTCGGTCTAC 1338
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CATCCGCAGCTCACCTATTGTGTGGTGCAGTTCCTGGAGAAGGATCCTAG 1388
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CTTATCGGAGGCGGTCATCAAAAGCCTACTTAAATTTTGGCCCAAGACGC 1438
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
ACAGTCCCAAGGAGGTTATGTTTTTGAACGAGCTGGAGGAGCTGTTGGAC 1488
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GTAATTGAGCCGGCCGAGTTCCAGAAGGTGATGGTGCCGCTGTTCCGCCA 1538
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
AATAGCCAAGTGCGTCTCTTCGCCTCATTTCCAGGTGGCCGAACGTGCGT 1588
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TGTACTATTGGAACAACGAGTACATTATGTCGCTGATAACGGATAACTCG 1638
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCGGTGATATTACCCATTATGTTCCCAGCGCTCAATCGCAACTCAAAGAC 1688
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCACTGGAACAAGAACATCCATGGTCTGATCTACAATGCACTCAAGCTGT 1738
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TCATGGAGATAGATCAGCGGCTTTTTGACGAGTGCAGCAAGAACTACAAG 1788
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CAAGAGAAGCAGATGGAGCGTGAGAAGCTGTCGCAAAGGGAGGAGCTCTG 1838
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCAACAGGTGGAGAGCTTGGCCAAGACCAACCCGGAGTGGACAAAGGCGC 1888
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCCGGTTTAACGACTGCCTGCCGGTCAGCGACAGCCGGGCCCTGTGCGAT 1938
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CAATATAGTGAGAACAGCGATTCAGCGTATGATCAGAGCGAGCAGAGGGC 1988
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCGCCAGCCGCCGCCTCCGCTGCCGCCCCAGAAACAGGCGCACCAGGAGC 2038
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
CCCGAGAGGTGAGACAGGCACTTGCCACATTAACAACACTAAACAACTAC 2088
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
TAATCCGCCACGTGTGATCCTGGCGTCGCTGTGAGCTGTGCCCAGCTAAG 2138
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
GCCCACTCTGTTTCAACTCTAATTCTAATCGAACGAATGTCTGTTAAAAT 2188
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140
AATCACACTCATGTCATTTAAAAAAAAAATACATATTTGTATATCTTTAA 2238
>CG7901|FBgn0038572|cDNA
\--------------------------------------------------
DME277140 AAAAAAAAAAAA 2250
>CG7901|FBgn0038572|cDNA \------------
\------------------------------------------------------------------------------
--
PROTEIN:
Pairwise Scores:
CLUSTAL W (1.81) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: Q9NFM7.PP2A_B' 670 aa
Sequence 2: CG7901|FBgn0038572 191 aa
Start of Pairwise alignments
Aligning...
Sequences ( 1:2 ) Aligned. Score: 98
Guide tree file created:
/net/nfs0/vol1/production/w3nobody/tmp/929511.617713-32028.dnd
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences: 2  Score:3995 
Alignment Score 1033
CLUSTAL-Alignment file created
/net/nfs0/vol1/production/w3nobody/tmp/929511.617713-32028.aln
Your guide tree:
929511.617713-32028.dnd
(Q9NFM7.PP2A_B':0.00524,CG7901| FBgn0038572:0.00524 );
Your Multiple Sequence Alignment:
929511.617713-32028.aln
CLUSTAL W (1.81) multiple sequence alignment
Q9NFM7.PP2A_B'
MDNEALDPTIKSSTSAATPTAAASETTTTAASSVVETTTTIAAATASAAESKNETTATNN 60
CG7901|FBgn0038572
MDNEALDPTIKSSTSAATPTAAASETTTTAASSVVETTTTIAAATASAAESKNETTATNN 60
Q9NFM7.PP2A_B'
NSNTSGSISSSSSNNIVIPASATNGIKESNSNLSTTTTAAAVAAATTVEGVAPAITSTIV 120
CG7901|FBgn0038572
NSNTSGSISSSSSNNIVIPASATNGIKESNSNLSTTTTAAAVAAATTVEGVAPAITSTIV 120
Q9NFM7.PP2A_B'
VTGGTPPLSSLANKLKDNTPPYDAPPPTPISKVLNITGTPIVRKEKRQTSARYNASKNCE 180
CG7901|FBgn0038572
VTGGTPPLSSLANKLKDNTPPYDAPPPTPISKVLNITGTPIVRKEKRQTSARYNASKNCE 180
Q9NFM7.PP2A_B'
LTALIPLNEKTAASEREELFIQKIQQCCTLFDFSEPLSDLKFKEVKRAALHEMVDFLTNQ 240
CG7901|FBgn0038572
LTALIPLNE----SE--------------------------------------------- 191
Q9NFM7.PP2A_B'
NGVITEVIYPEAINMFAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLR 300
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B'
FLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQ 360
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B'
INNVFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKQFLLKVLLPLHKAKSLSVY 420
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B'
HPQLTYCVVQFLEKDPSLSEAVIKSLLKFWPKTHSPKEVMFLNELEELLDVIEPAEFQKV 480
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B'
MVPLFRQIAKCVSSPHFQVAERALYYWNNEYIMSLITDNSAVILPIMFPALNRNSKTHWN 540
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B'
KNIHGLIYNALKLFMEIDQRLFDECSKNYKQEKQMEREKLSQREELWQQVESLAKTNPEW 600
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B'
TKARRFNDCLPVSDSRALCDQYSENSDSAYDQSEQRARQPPPPLPPQKQAHQEPREVRQA 660
CG7901|FBgn0038572
\------------------------------------------------------------
Q9NFM7.PP2A_B' LATLTTLNNY 670
CG7901|FBgn0038572 \----------
\------------------------------------------------------------------------------
--
airwise Scores:
CLUSTAL W (1.81) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: Q9NFM7.PP2A_B' 670 aa
Sequence 2: CG7901|FBgn0038572.alt2 191 aa
Start of Pairwise alignments
Aligning...
Sequences ( 1:2 ) Aligned. Score: 98
Guide tree file created:
/net/nfs0/vol1/production/w3nobody/tmp/977453.525083-31845.dnd
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences: 2  Score:3995 
Alignment Score 1033
CLUSTAL-Alignment file created
/net/nfs0/vol1/production/w3nobody/tmp/977453.525083-31845.aln
Your guide tree:
977453.525083-31845.dnd
(Q9NFM7.PP2A_B':0.00524,CG7901|FBgn0038572. alt2:0.00524 );
Your Multiple Sequence Alignment:
977453.525083-31845.aln
CLUSTAL W (1.81) multiple sequence alignment
Q9NFM7.PP2A_B'
MDNEALDPTIKSSTSAATPTAAASETTTTAASSVVETTTTIAAATASAAE 50
CG7901|FBgn0038572.alt2
MDNEALDPTIKSSTSAATPTAAASETTTTAASSVVETTTTIAAATASAAE 50
Q9NFM7.PP2A_B'
SKNETTATNNNSNTSGSISSSSSNNIVIPASATNGIKESNSNLSTTTTAA 100
CG7901|FBgn0038572.alt2
SKNETTATNNNSNTSGSISSSSSNNIVIPASATNGIKESNSNLSTTTTAA 100
Q9NFM7.PP2A_B'
AVAAATTVEGVAPAITSTIVVTGGTPPLSSLANKLKDNTPPYDAPPPTPI 150
CG7901|FBgn0038572.alt2
AVAAATTVEGVAPAITSTIVVTGGTPPLSSLANKLKDNTPPYDAPPPTPI 150
Q9NFM7.PP2A_B'
SKVLNITGTPIVRKEKRQTSARYNASKNCELTALIPLNEKTAASEREELF 200
CG7901|FBgn0038572.alt2
SKVLNITGTPIVRKEKRQTSARYNASKNCELTALIPLNE----SE----- 191
Q9NFM7.PP2A_B'
IQKIQQCCTLFDFSEPLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYP 250
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
EAINMFAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLR 300
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
FLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKF 350
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
LGLRAFIRKQINNVFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEH 400
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
KQFLLKVLLPLHKAKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLLKFW 450
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
PKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVA 500
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
ERALYYWNNEYIMSLITDNSAVILPIMFPALNRNSKTHWNKNIHGLIYNA 550
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
LKLFMEIDQRLFDECSKNYKQEKQMEREKLSQREELWQQVESLAKTNPEW 600
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B'
TKARRFNDCLPVSDSRALCDQYSENSDSAYDQSEQRARQPPPPLPPQKQA 650
CG7901|FBgn0038572.alt2 \--------------------------------------------------
Q9NFM7.PP2A_B' HQEPREVRQALATLTTLNNY 670
CG7901|FBgn0038572.alt2 \--------------------
\------------------------------------------------------------------------------
--------
OK
BLASTP 2.0a19MP-WashU 05-Feb-1998 <up>Build sol2.5-ultra  01:47:24  05-Feb-1998</up>
Reference: Gish, Warren (1994-1997). unpublished.
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J.
Lipman (1990). Basic local alignment search tool. J. Mol. Biol.  215:403-10 .
Query= Q9NFM7, 670 bases, 8FF7E193 checksum.
(670 letters)
Database: aa_gadfly.dros
14,080 sequences; 6,850,524 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
CG5643|FBan0005643|CT17830|FBan0005643  last_updated:000321  1505 9.3e-156 1
CG7913|FBan0007913|CT23900|FBan0007913  last_updated:000321  931 6.2e-95 1
CG4724|FBan0004724|CT15179|FBan0004724  last_updated:000321  452 8.0e-44 1
CG7901|FBan0007901|CT23882|FBan0007901  last_updated:000321  314 3.5e-29 1
CG7901|FBan0007901|CT42545|FBan0007901  last_updated:000321  314 3.5e-29 1
>CG7913|FBan0007913|CT23900|FBan0007913  last_updated:000321 
Length = 661
Score = 931 (327.7 bits), Expect = 6.2e-95, P = 6.2e-95
Identities = 185/214 (86%), Positives = 192/214 (89%)
Query: 156 ITGTPIVRKEKRQTSARYNASKNCELTALIPLNEKTAASEREELFIQKIQQCCTLFDFSE 215
\+TG+P \+++ AS L AL \+TAASEREELFIQKIQQCCTLFDFSE
Sbjct: 441 LTGSPGRARDRNLFYTPPTASVAMALPAL----RETAASEREELFIQKIQQCCTLFDFSE 496
Query: 216 PLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYPEAINMFAVNLFRTLPPSSNPNGAEF 275
PLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYPEAINMFAVNLFRTLPPSSNPNGAEF
Sbjct: 497 PLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYPEAINMFAVNLFRTLPPSSNPNGAEF 556
Query: 276 DPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRE 335
DPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRE
Sbjct: 557 DPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAKRFIDHQFVLQLLDLFDSEDPRE 616
Query: 336 RDFLKTVLHRIYGKFLGLRAFIRKQINNVFYRFI 369
RDFLKTVLHRIYGKFLGLRAFIRKQINNVFYR \+
Sbjct: 617 RDFLKTVLHRIYGKFLGLRAFIRKQINNVFYRHL 650