Gene or accession: CG10408
Release: 1
Gene annotation error
Gene CG10408 has incorrect exon/intron structure or translation start site.
Comments: CG10408 matches part of the Waldo-A transposon from 1392-2328 of its
2328bp.
Query= CG10408|FBgn0033023|CT9331|FBan0010408 GO:<up>multicopper ferroxidase
iron transport mediator (GO:0004323)</up> located on: 2R 41F6-41F6; |cDNA
sequence
(2328 letters)
Database: /data/blast/db/na_te.dros
55 sequences; 282,078 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High
Probability Sequences producing High-scoring Segment Pairs: Score
P(N) N
gb|AC005734|Waldo-A WALDOA 5150bp 1678 2.4e-130
6 gb|AC005847|Waldo-B WALDOB 5180bp 262 4.3e-05
1 gb|AJ278684|pilger DME278684 5108bp Derived from AJ278684... 247 0.00021
1
>gb|AC005734|Waldo-A WALDOA 5150bp
Length = 5171
Plus Strand HSPs:
Score = 1678 (257.8 bits), Expect = 2.4e-130, Sum P(6) = 2.4e-130
Identities = 422/515 (81%), Positives = 422/515 (81%), Strand = Plus / Plus
Query: 1805 TAGACGAGTCAGACAAGCGTATCAAACCCAATAAAGCCGCTGGACTAAATGGAATTCCTG 1864
| | |||| ||| |||||| ||||||||||| |||||| |||||||| |||| |||||||
Sbjct: 3076 TCGCCGAGGCAGCCAAGCGCATCAAACCCAACAAAGCCCCTGGACTAGATGGTATTCCTG 3135
Query: 1865 GTGCAGTTGTTAAAGCATTGGCGTTCGGTAGACCTGACATCTTCAGGGCCACCTTACAGC 1924
| || ||| | |||||| ||||| | ||||||||||| ||||||||||||||||| ||||
Sbjct: 3136 GAGCTGTTATAAAAGCAGTGGCGCTGGGTAGACCTGAAATCTTCAGGGCCACCTTCCAGC 3195
Query: 1925 AATGTCTTTTGGACGGAATCTTTTCAATAAGGTGGAAAAGCCAGAAAATAGTTCTGCTGC 1984
|||| ||| ||||||||||||| ||| |||||||||||||||||| |||| ||| |||
Sbjct: 3196 AATGCCTTCTGGACGGAATCTTCCCAACAAGGTGGAAAAGCCAGAAGCTAGTCCTGTTGC 3255
Query: 1985 ACAAATGCAAGGGATCAGCATATGCTGCAAACAGCTACCGCCCTCTATGCCTACTAAATA 2044
||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 3256 CGAAAGGCAAGGGACCAGCACATGCTGCAAACAGCTACCGCCCTCTATGCCTACTGGATA 3315
Query: 2045 TAGTTGGAAAACTGTCCGAAGATATCTTGTATACTCGAATAGAGGCCGTC---GAT-GCT 2100
|||| |||||||||| |||| |||| ||||||| |||||||||| || || ||
Sbjct: 3316 TAGTAGGAAAACTGTTCGAACGTATCCTGTATACCAGAATAGAGGCAATCACCGAGAGCA 3375
Query: 2101 CTCAGTGACGAAGGAAGTCAGCAATATGGCTTTCGGAAGGGAAAGAGTATCCTGGACACT 2160
||| | | |||||||| ||||||||||| ||||| || ||||| | |||||| ||
Sbjct: 3376 \-TCAACGGCCTGGGAAGTCATCAATATGGCTTCCGGAAAGGTAAGAGCACTCTGGACGCT 3434
Query: 2161 CCTTTGACCGTGAGTAACATCGACAAGACCGCTCTTGCTGGTGATACATGGCTAGTTGGC 2220
| || | |||| ||||||||| |||||||||| || ||||||||| |||| ||| |||
Sbjct: 3435 CTTTCGGCCGTTTGTAACATCGCCAAGACCGCTATTTCTGGTGATAGATGGTTAGGGGGC 3494
Query: 2221 AGGGAGGAATACTACGCAATAGTGACTCTGGACGTAAAGAACGCCTTCAACACCGCCAGA 2280
||| ||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||
Sbjct: 3495 AGGAAGGAATACTGCGCAATTGTGACTCTGGACGTAAGGAACGCTTTCAACACCGCCAGA 3554
Query: 2281 TGGGCCGCAA--CTCAGCAACTTTGGGTACCGTGT 2313
||| ||| || ||| || | || |||||| |
Sbjct: 3555 TGGCCCGTAATCCTC-GCGGCCATG--TACCGTAT 3586
Score = 583 (93.5 bits), Expect = 2.4e-130, Sum P(6) = 2.4e-130
Identities = 143/176 (81%), Positives = 143/176 (81%), Strand = Plus / Plus
Query: 1523 AAGTGCCCAAGGAGCAAGTTCCCAACGTTCAGGCGCCCAAGCCGAACTACCAAGCGACTG 1582
| || ||||||| |||||| || || | |||||||||||||||| | ||| || |
Sbjct: 960 AGGTACCCAAGGTGCAAGTGCCAAAAATCCAGGCGCCCAAGCCGAGCAACCCTACGTTGG 1019
Query: 1583 GTAGCAAGGGAGAAGGAAAGGCGACATCCAGAGCAAAAGAGTCCAAGCCAGGCAGCTATG 1642
|| |||| || |||| |||||| ||||||||| |||| |||||||| ||||||||||| |
Sbjct: 1020 GTGGCAACGGTGAAGAAAAGGCAACATCCAGACCAAACGAGTCCAAACCAGGCAGCTACG 1079
Query: 1643 AATCTGTCTCCCAGAATTCTAGCACGACTGCAGAGTGGACCAAGGTGAAGCCTAAG 1698
||||||| || ||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1080 CATCTGTCGCCAAGAATGCTAGCACGGGTGTAGAGTGGACCAAGGTGAAGCCTACG 1135
Score = 370 (61.6 bits), Expect = 2.4e-130, Sum P(6) = 2.4e-130
Identities = 82/92 (89%), Positives = 82/92 (89%), Strand = Plus / Plus
Query: 1392 AGGTGGAGAACTTGGCTCCTACAGCATCTACTATCGCGACAAGCCAGAAGACGATGGACT 1451
||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 576 AGGTGGAGAACTTGGCTCCTACAGCATCTACGACCGCGACAAGTCAGAAGACGATGGACC 635
Query: 1452 ACACTACCATGCCATCGCAAAAGGCGGGATGG 1483
||| || |||||||||||||| ||||| ||
Sbjct: 636 ACATCGCCGTGCCATCGCAAAAGACGGGAGGG 667
Score = 331 (55.7 bits), Expect = 2.4e-130, Sum P(6) = 2.4e-130
Identities = 113/155 (72%), Positives = 113/155 (72%), Strand = Plus / Plus
Query: 1683 CAAGGTGAAGCCTAAGAAGAGGAGCTCCACAGCTGCATGGTCGCTCAATCGCGGTGGAAC 1742
||| || || | | | || ||||| | ||| | ||| | | | | |||| || |
Sbjct: 1892 CAATGTCAATCATT-GCGCAGCAGCTC-AGAGCCTCCTGGCC-CAGACT-GCGGCTGAGC 1947
Query: 1743 GCGATGTAAACATCATGCTCCTAAGCGAACCTTACGTCACTGG--G-G-ACAATACTCCA 1798
|| ||||| |||||||||||||||||||||| |||||| |||| | | ||||| ||||
Sbjct: 1948 GCAATGTAGACATCATGCTCCTAAGCGAACCCTACGTCTCTGGTAGCGGACAATCGTCCA 2007
Query: 1799 AGATCCTAGACGAGTCAGACAA-GC-G-TATCAAA 1830
|||||| |||||| ||| || || | |||||||
Sbjct: 2008 TGATCCTTGACGAGACAGGTAAAGCAGCTATCAAA 2042
Score = 196 (35.5 bits), Expect = 1.9e-100, Sum P(5) = 1.9e-100
Identities = 96/149 (64%), Positives = 96/149 (64%), Strand = Plus / Plus
Query: 1660 TCTAGCACGACTGCAGAGTGGACCAAGGTGAAGCCTAAGAAGAGGAGCTCCACAGCTGCA 1719
|||| | | | || || ||||| | | | | | | || |||||||||||||||||||
Sbjct: 1396 TCTATCTTG-CAGCGGATTGGACGAGGCT-ACGAC--AGCAGAGGAGCTCCACAGCTGCT 1451
Query: 1720 TGGTCGCTCAATCGCGGTGGAACGCGATGTAAA-CATCATGCTCCTAAGCGAACCTTACG 1778
||||||| |||| | | || || | |||| | | | | | | || | |||| ||
Sbjct: 1452 TGGTCGCCCAATTCCAG-GGCCTGC-AGATAAATCCTGAAGATA-TCAGGGG-CCTT-CG 1506
Query: 1779 TC-ACTG-GGGACAATACTCCAAGATCCT 1805
| || |||| || | || | |||
Sbjct: 1507 CAGAATGCGGGATGGCACGCAAATAGCCT 1535
Score = 172 (31.9 bits), Expect = 2.4e-130, Sum P(6) = 2.4e-130
Identities = 40/47 (85%), Positives = 40/47 (85%), Strand = Plus / Plus
Query: 1482 GGTCTTCGGACCTGACCACGGCTCTCCAGAGCCAGAACCTGAAGTGC 1528
||||||||||||||||| |||||||||||| || |||||| | ||
Sbjct: 693 GGTCTTCGGACCTGACCGCGGCTCTCCAGAATGAGGACCTGAGGGGC 739
Score = 130 (25.6 bits), Expect = 2.4e-130, Sum P(6) = 2.4e-130
Identities = 30/35 (85%), Positives = 30/35 (85%), Strand = Plus / Plus
Query: 2293 CAGCAACTTTGGGTACCGTGTCCCATGGTACGATA 2327
|||| ||||| || |||| |||| |||||||||||
Sbjct: 3620 CAGCTACTTTAGGGACCGGGTCCTATGGTACGATA 3654