Gene or accession: CG13788
Release: 3
Gene annotation error
Gene CG13788 has incorrect exon/intron structure or translation start site.
Gene cDNA sequence:
>Gr28bA
ATGATCCGCTGCGGATTGGACATTTTTCGCGGCTGCCGAGGACGATTCCGCTACTGGTTGAGTGCCCGGGATTGCTATG
ATTCCATTTCGTTGATGGTGGCCATTGCCTTTGCTTTGGGCATCACACCGTTTCTGGTGAGGCGAAACGCGCTGGGGGA
AAATTCCTTAGAACAGTCGTGGTATGGATTCCTAAATGCCATTTTTCGCTGGCTACTGCTCGCCTATTGCTACAGCTAC
ATTAACCTGAGAAACGAGAGCCTGATTGGCTATTTCATGAGGAACCATGTGTCACAGATAAGCACACGAGTCCATGACG
TCGGTGGCATTATAGCGGCCGTGTTCACCTTTATATTGCCGCTACTTCTGCGAAAATACTTCCTGAAATCTGTCAAGAA
TATGGTGCAGGTTGATACACAACTAGAACGTTTGCGAAGTCCTGTCAATTTCAATACGGTTGTAGGCCAGGTGGTCCTG
GTCATATTGGCGGTAGTTCTCCTGGATACCGTCCTTCTGACAACTGGCTTAGTTTGCCTGGCCAAAATGGAGGTGTACG
CTTCGTGGCAACTCACCTTCATTTTTGTCTACGAGCTCCTGGCCATTTCCATCACCATCTGCATGTTTTGTCTGATGAC
CAGAACGGTTCAGCGCCGAATCACCTGCCTTCACAAGGTGTTGAAGAACCTAGCCCATCAATGGGACACCCGAAGCCTC
AAGGCAGTGAATCAAAAACAGCGCTCTCTACAATGTCTCGATTCATTTTCCATGTACACCATTGTAACCAAGGATCCTG
CGGAGATTATACAGGAGTCCATGGAGATACATCATCTCATTTGCGAGGCAGCTGCCACGGCTAACAAATATTTTACCTA
CCAATTGCTGACCATTATATCCATAGCATTTCTGATCATCGTTTTCGATGCATACTATGTTCTGGAGACGCTACTGGGA
AAATCGAAGCGCGAAAGCAAATTCAAAACTGTGGAATTTGTGACATTTTTCTCGTGTCAAATGATTTTGTATCTGATCG
CCATAATTTCCATTGTCGAGGGAAGTAATCGAGCCATCAAAAAGAGCGAGAAAACTGGAGGCATAGTGCACTCCCTACT
CAATAAAACCAAAAGTGCTGAGGTCAAGGAGAAACTGCAGCAATTCTCCATGCAGTTGATGCATCTGAAAATTAATTTT
ACTGCAGCTGGTCTGTTCAACATCGACCGCACATTGTATTTCACGATCAGCGGGGCCTTGACCACTTATCTCATCATCT
TGCTGCAGTTCACATCCAATTCCCCGAACAATGGTTATGGGAATGGCAGCTCTTGCTGTGAGACCTTCAATAATATGAC
GAATCATACGCTTTAG
>Gr28bB
ATGTCCGCCCTGCGTCGGGTGCGCAAATACTTTATATCCTCTCAGGTCTACGAGGCACTGCGTCCACTATTCTTCCTAA
CGTTTCTATACGGACTAACGCCATTTCATGTGGTCAGACGAAAGATGGGGGAATCCTACTTGAAGATGTCCTGTTTCGG
TGTCTTCAACATCTTCATTTACATCTGCCTCTGCGGATTCTGCTACATTTCATCCCTGAGGCAGGGAGAATCCATTGTG
GGATATTTCTTTCGCACCGAAATCTCCACAATCGGCGATCGTTTGCAGATCTTTAATGGTTTGATAGCTGGTGCTGTGA
TTTATACGTCGGCAATCCTAAAACGCTGCAAGCTTTTGGGCACACTGACCATTCTACACAGCTTGGATACGAACTTCTC
GAACATTGGAGTACGTGTGAAATATTCGAGAATATTCCGGTACTCGCTACTGGTGCTGATCTTCAAGCTACTGATCCTG
GGTGTTTATTTCGTTGGAGTTTTCCGGCTGCTCGTCTCCCTGGATGTCACACCATCGTTCTGCGTTTGTATGACATTCT
TTCTGCAACATTCGGTTGTCTCCATAGCGATTTGTTTGTTCTGCGTGATTGCCTTCAGTTTCGAGCGGCGCCTCAGTAT
CATCAATCAGGTGTTGAAGAACCTAGCCCATCAATGGGACACCCGAAGCCTCAAGGCAGTGAATCAAAAACAGCGCTCT
CTACAATGTCTCGATTCATTTTCCATGTACACCATTGTAACCAAGGATCCTGCGGAGATTATACAGGAGTCCATGGAGA
TACATCATCTCATTTGCGAGGCAGCTGCCACGGCTAACAAATATTTTACCTACCAATTGCTGACCATTATATCCATAGC
ATTTCTGATCATCGTTTTCGATGCATACTATGTTCTGGAGACGCTACTGGGAAAATCGAAGCGCGAAAGCAAATTCAAA
ACTGTGGAATTTGTGACATTTTTCTCGTGTCAAATGATTTTGTATCTGATCGCCATAATTTCCATTGTCGAGGGAAGTA
ATCGAGCCATCAAAAAGAGCGAGAAAACTGGAGGCATAGTGCACTCCCTACTCAATAAAACCAAAAGTGCTGAGGTCAA
GGAGAAACTGCAGCAATTCTCCATGCAGTTGATGCATCTGAAAATTAATTTTACTGCAGCTGGTCTGTTCAACATCGAC
CGCACATTGTATTTCACGATCAGCGGGGCCTTGACCACTTATCTCATCATCTTGCTGCAGTTCACATCCAATTCCCCGA
ACAATGGTTATGGGAATGGCAGCTCTTGCTGTGAGACCTTCAATAATATGACGAATCATACGCTTTAG
>Gr28bC
ATGGACATTGAAATGGCCAAGGAGCCGGTGAATCCAACGGATACTCCGGATATAGAAGTGACTCCCGGTCTATGCCAGC
CCTTGCGTCGTAGATTTCGGCGATTTGTTACCGCCAAACAGCTATACGAGTGCCTGCGCCCGGTGTTCCATGTGACCTA
CATCCACGGACTCACCTCCTTCTACATTAGTTGCGATACTAAAACCGGAAAGAAAGCCATCAAGAAAACCATTTTCGGC
TACATCAATGGAATCATGCACATCGCCATGTTTGTCTTTGCCTATAGCCTTACGATTTATAACAATTGCGAGTCGGTGG
CTAGTTACTTCTTTCGATCTCGCATTACCTATTTCGGGGATTTGATGCAGATAGTGAGTGGATTCATTGGAGTTACTGT
CATCTACCTGACTGCCTTTGTCCCAAACCATCGATTGGAGCGTTGCCTTCAGAAGTTTCACACCATGGACGTGCAACTC
CAGACGGTGGGAGTGAAGATCATGTACAGCAAGGTGCTGCGATTTAGCTACATGGTCCTGATCTCCATGTTCCTTGTAA
ACGTACTCTTTACCGGCGGCACCTTTTCGGTTCTCTATTCCTCGGAAGTGGCGCCCACCATGGCCCTGCACTTCACCTT
CCTCATCCAGCACACGGTCATCGCCATTGCCATTGCGCTCTTCAGTTGCTTCACATATCTGGTGGAGATGCGACTGGTG
ATGGTCAATAAGGTGTTGAAGAACCTAGCCCATCAATGGGACACCCGAAGCCTCAAGGCAGTGAATCAAAAACAGCGCT
CTCTACAATGTCTCGATTCATTTTCCATGTACACCATTGTAACCAAGGATCCTGCGGAGATTATACAGGAGTCCATGGA
GATACATCATCTCATTTGCGAGGCAGCTGCCACGGCTAACAAATATTTTACCTACCAATTGCTGACCATTATATCCATA
GCATTTCTGATCATCGTTTTCGATGCATACTATGTTCTGGAGACGCTACTGGGAAAATCGAAGCGCGAAAGCAAATTCA
AAACTGTGGAATTTGTGACATTTTTCTCGTGTCAAATGATTTTGTATCTGATCGCCATAATTTCCATTGTCGAGGGAAG
TAATCGAGCCATCAAAAAGAGCGAGAAAACTGGAGGCATAGTGCACTCCCTACTCAATAAAACCAAAAGTGCTGAGGTC
AAGGAGAAACTGCAGCAATTCTCCATGCAGTTGATGCATCTGAAAATTAATTTTACTGCAGCTGGTCTGTTCAACATCG
ACCGCACATTGTATTTCACGATCAGCGGGGCCTTGACCACTTATCTCATCATCTTGCTGCAGTTCACATCCAATTCCCC
GAACAATGGTTATGGGAATGGCAGCTCTTGCTGTGAGACCTTCAATAATATGACGAATCATACGCTTTAG
>Gr28bD
ATGTCATTTTACTTTTGCGAAATATTCAAACCTCGAGATGCTTTCGGAGCCGAGCAAACCTTACTTTTGTACACCTATC
TACTCGGTTTGACCCCTTTTCGTTTAAGGGGTCAGGCTGGTGAGAGGCAGTTTCATCTAAGTAAAATCGGCTATCTGAA
TGCTTTTCTTCAGTTGAGTTTCTTCAGCTATTGCTTTTTGGCCGCTCTCATCGAACAGCAGAGTATTGTTGGCTATTTT
TTCAAATCGGAAATTTCTCAAATGGGAGACTCACTGCAAAAATTCATCGGCATGACTGGAATGTCGATACTGTTCCTCT
GCAGCAGCATTCGTGTTAGATTGCTGATCCATATATGGGATCGTATTTCCTATATAGATGATCGTTTTCTCAACTTGGG
CGTATGCTTCAATTATCCCGCCATTATGCGATTGAGACTTTTACAGATCTTCCTCATTAATGGCGTGCAATTGGGCTAT
TTGATAAGTTCCAACTGGATGTTGTTGGGTAATGATGTGCGACCCATTTACACAGCAATTGTGGCGTTCTACGTGCCCC
AAATATTTCTACTAAGTATTGTTATGCTGTTTAACGCTACATTACATCGTCTCTGGCAACATTTCACTGTACTGAATCA
GGTGTTGAAGAACCTAGCCCATCAATGGGACACCCGAAGCCTCAAGGCAGTGAATCAAAAACAGCGCTCTCTACAATGT
CTCGATTCATTTTCCATGTACACCATTGTAACCAAGGATCCTGCGGAGATTATACAGGAGTCCATGGAGATACATCATC
TCATTTGCGAGGCAGCTGCCACGGCTAACAAATATTTTACCTACCAATTGCTGACCATTATATCCATAGCATTTCTGAT
CATCGTTTTCGATGCATACTATGTTCTGGAGACGCTACTGGGAAAATCGAAGCGCGAAAGCAAATTCAAAACTGTGGAA
TTTGTGACATTTTTCTCGTGTCAAATGATTTTGTATCTGATCGCCATAATTTCCATTGTCGAGGGAAGTAATCGAGCCA
TCAAAAAGAGCGAGAAAACTGGAGGCATAGTGCACTCCCTACTCAATAAAACCAAAAGTGCTGAGGTCAAGGAGAAACT
GCAGCAATTCTCCATGCAGTTGATGCATCTGAAAATTAATTTTACTGCAGCTGGTCTGTTCAACATCGACCGCACATTG
TATTTCACGATCAGCGGGGCCTTGACCACTTATCTCATCATCTTGCTGCAGTTCACATCCAATTCCCCGAACAATGGTT
ATGGGAATGGCAGCTCTTGCTGTGAGACCTTCAATAATATGACGAATCATACGCTTTAG
>Gr28bE
ATGTGGCTCCTTAGGCGATCGGTTGGAAAATCGGGCAACCGACCACACGACGTATACACCTGCTATCGATTGACTATAT
TCATGGCACTTTGTCTCGGAATTGTGCCTTACTACGTATCCATATCTTCGGAAGGCAGAGGAAAACTAACATCCTCGTA
CATCGGCTACATCAACATCATCATACGAATGGCCATATATATGGTCAACTCATTCTACGGCGCCGTCAATCGGGATACG
TTGATGTCCAACTTTTTCCTTACAGACATATCCAATGTGATAGATGCTTTGCAAAAGATCAATGGAATGCTGGGAATAT
TTGCCATATTACTTATATCGCTATTGAACCGAAAAGAATTGCTAAAACTGCTGGCCACATTCGATAGACTTGAGACGGA
GGCGTTTCCACGGGTGGGCGTGGCAATGCACCAGGTTGCAGCTAATAAGAAAATGAATCGATTGGTTATAATCCTTGTT
GGCAGTATGGTGGCATATATAACCTGTAGTTTTCTGATGATCAGTTTGAGAGACACGACCACATTTTCTATCTCAGCAG
TGATTAGTTTTTTTTCACCACATTTTATCGTGTGCGCGGTTTCTTTTCTGGCTGGAAATGTAATGATTAAGTTACGCAT
ATATCTGAGTGCACTTAACGAGGTGTTGAAGAACCTAGCCCATCAATGGGACACCCGAAGCCTCAAGGCAGTGAATCAA
AAACAGCGCTCTCTACAATGTCTCGATTCATTTTCCATGTACACCATTGTAACCAAGGATCCTGCGGAGATTATACAGG
AGTCCATGGAGATACATCATCTCATTTGCGAGGCAGCTGCCACGGCTAACAAATATTTTACCTACCAATTGCTGACCAT
TATATCCATAGCATTTCTGATCATCGTTTTCGATGCATACTATGTTCTGGAGACGCTACTGGGAAAATCGAAGCGCGAA
AGCAAATTCAAAACTGTGGAATTTGTGACATTTTTCTCGTGTCAAATGATTTTGTATCTGATCGCCATAATTTCCATTG
TCGAGGGAAGTAATCGAGCCATCAAAAAGAGCGAGAAAACTGGAGGCATAGTGCACTCCCTACTCAATAAAACCAAAAG
TGCTGAGGTCAAGGAGAAACTGCAGCAATTCTCCATGCAGTTGATGCATCTGAAAATTAATTTTACTGCAGCTGGTCTG
TTCAACATCGACCGCACATTGTATTTCACGATCAGCGGGGCCTTGACCACTTATCTCATCATCTTGCTGCAGTTCACAT
CCAATTCCCCGAACAATGGTTATGGGAATGGCAGCTCTTGCTGTGAGACCTTCAATAATATGACGAATCATACGCTTTAG
Protein sequence:
>Gr28bA
MIRCGLDIFRGCRGRFRYWLSARDCYDSISLMVAIAFALGITPFLVRRNALGENSLEQSWYGFLNAIFRWLLLAYCYSY
INLRNESLIGYFMRNHVSQISTRVHDVGGIIAAVFTFILPLLLRKYFLKSVKNMVQVDTQLERLRSPVNFNTVVGQVVL
VILAVVLLDTVLLTTGLVCLAKMEVYASWQLTFIFVYELLAISITICMFCLMTRTVQRRITCLHKVLKNLAHQWDTRSL
KAVNQKQRSLQCLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLG
KSKRESKFKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINF
TAAGLFNIDRTLYFTISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL
>Gr28bB
MSALRRVRKYFISSQVYEALRPLFFLTFLYGLTPFHVVRRKMGESYLKMSCFGVFNIFIYICLCGFCYISSLRQGESIV
GYFFRTEISTIGDRLQIFNGLIAGAVIYTSAILKRCKLLGTLTILHSLDTNFSNIGVRVKYSRIFRYSLLVLIFKLLIL
GVYFVGVFRLLVSLDVTPSFCVCMTFFLQHSVVSIAICLFCVIAFSFERRLSIINQVLKNLAHQWDTRSLKAVNQKQRS
LQCLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFK
TVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNID
RTLYFTISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL
>Gr28bC
MDIEMAKEPVNPTDTPDIEVTPGLCQPLRRRFRRFVTAKQLYECLRPVFHVTYIHGLTSFYISCDTKTGKKAIKKTIFG
YINGIMHIAMFVFAYSLTIYNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDVQL
QTVGVKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSVLYSSEVAPTMALHFTFLIQHTVIAIAIALFSCFTYLVEMRLV
MVNKVLKNLAHQWDTRSLKAVNQKQRSLQCLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISI
AFLIIVFDAYYVLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEV
KEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL
>Gr28bD
MSFYFCEIFKPRDAFGAEQTLLLYTYLLGLTPFRLRGQAGERQFHLSKIGYLNAFLQLSFFSYCFLAALIEQQSIVGYF
FKSEISQMGDSLQKFIGMTGMSILFLCSSIRVRLLIHIWDRISYIDDRFLNLGVCFNYPAIMRLRLLQIFLINGVQLGY
LISSNWMLLGNDVRPIYTAIVAFYVPQIFLLSIVMLFNATLHRLWQHFTVLNQVLKNLAHQWDTRSLKAVNQKQRSLQC
LDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVE
FVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTL
YFTISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL
>Gr28bE
MWLLRRSVGKSGNRPHDVYTCYRLTIFMALCLGIVPYYVSISSEGRGKLTSSYIGYINIIIRMAIYMVNSFYGAVNRDT
LMSNFFLTDISNVIDALQKINGMLGIFAILLISLLNRKELLKLLATFDRLETEAFPRVGVAMHQVAANKKMNRLVIILV
GSMVAYITCSFLMISLRDTTTFSISAVISFFSPHFIVCAVSFLAGNVMIKLRIYLSALNEVLKNLAHQWDTRSLKAVNQ
KQRSLQCLDSFSMYTIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRE
SKFKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGL
FNIDRTLYFTISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL
Comments: The current Gr28b annotation of 1227aa has unfortunately not been
revised according to my earlier proposal, so I renew it. This is an
alternatively spliced splice gene, like Gr23a, except here there are five
alternative first exons, each presumably with their own promoters and encoding
quite different TM1-4 domains from each other. They are all proposed to splice
into a common pair of C-terminal exons that encode the TM5-7 domains of these
7TM receptors. I've included the full proposed cDNAs for each of the splice
forms and proteins (A-E). Comparison with D. pseudoobscura shows exactly the
same gene structure there.