Subject: Re: Question about AmaR1 allele
Hi Beverley:
The deletion starts with the first base of the P114 codon and ends with
the second base of the A123 codon. So these 29 bases are deleted:
CCGTACGAGTGTCAGGTGCTTGTTTCGGC
Eric
On May 20, 2005, at  2:34  PM, Beverley Matthews wrote:
>
Dear Dr. Liebl,
I am a curator for FlyBase and am in the process of curating the
molecular nature of the Ama mutations that you reported in a 2003
Development paper, to appear in the genome maps in FlyBase.
I have a question about the AmaR1 deletion. From your description,
in addition to the missense mutation, there is a 29 base deletion
beginning in codon P114 (CCG), resulting in a frameshift.
Can you tell me the exact position of the deletion so I can map the
mutation accurately in FlyBase?
wt
114
MetGlyProTyrGluCysGlnValLeuValSerAlaThrGluLys
ATGGGTCCGTACGAGTGTCAGGTGCTTGTTTCGGCCACGGAGAAG
Thanks in advance for any help you can offer. Your response will be
saved as a Personal Communication to FlyBase and used as a reference
for the mapping of the AmaR1 mutation (in addition to your
Development
paper).
Sincerely,
Beverley Matthews
FlyBase-Harvard