FB2026_03 , released September 17, 2026
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Wolfstetter, G., Palmer, R. (2018.2.5). Location data for cnk and Alk deletions. 
FlyBase ID
FBrf0237995
Publication Type
Personal communication to FlyBase
Abstract
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Text of Personal Communication
cnkΔ allele:
Deleted sequence coordinates (according to FlyBase genome browse. FB2017_06, released Dec 31, 2017)
> 2R:17414972..17415097 
cgaggtggttagtatgccaggtccacggtaacttcgatatcccgcctgattgtgcgtggg
cagggtgatttgggagaagatctcctgatcgcaatcgggatccgcactgcttggtggcgt
tactgc
cnkΔY2H allele:
Deleted sequence coordinates (according to FlyBase genome browse. FB2017_06, released Dec 31, 2017)
> 2R:17414633..17415703 
gttattattgttgttgttgttgttggtggtggtggtgctggcggtggcactggtggcacc
actgctgctgggcgtccgcatcacgatgcgggacaagctggtatcgctgagcgagtagat
ttccggctcaaagacaggcggacactccatatttggatagtccggcgttgccgccttcga
atccacagatcccgaactggacacttttggggtggccgcacactctgatatcgttgcctc
cgcttgctcctcctctctctgcctgctggtgttgacgggaggcggtggcgctgggggcaa
cggcggctgcaagccctccgacgagcacaaattagtggtcgaggtggttagtatgccagg
tccacggtaacttcgatatcccgcctgattgtgcgtgggcagggtgatttgggagaagat
ctcctgatcgcaatcgggatccgcactgcttggtggcgttactgcctgctgctgatggtg
atggtgcccgaacagcgtgcgatgcagcagcggtgagcccaggaaacgattctccttgga
gggcttcgccggcgtgccacccgatatggagagtttcgaaaagattggtatcggggccga
gttcttgcgatgcgcatcgtacttggtgcccactatcttgtctcgcagatcctgattgta
cgtctggcttttcttgatgctgctgccgctgccgattatggtgactccattgcctacggc
tccatccaaggcgtgattcgatttggacttcttgttcagcggcagcgtcatagtcatcgc
atgacccggcccacagccactgcccgcggagccagttgagtgcttggaaaagggaaaccg
acgatcgccgctagactttcctttggacttcttttgatccgcaccggatccggaactctt
gccgctgccgccgctgctgttcttgtgcaggaaactggagagctgtaactgctgtgagcg
caagaagtgcttggccttgctgctatgttgctgctgcgtctgctgatgttgtagctgctg
ctgctgttgcacatgctgcaggtggtgctggtgatgatgatgatgatggtg
AlkKO allele:
Comment: The following sequence in the Alk locus was replaced by an attP landing site employing the vectors and techniques described in: L. A. Baena-Lopez, C. Alexandre, A. Mitchell, L. Pasakarnis, and J.-P. Vincent. Accelerated homologous recombination and subsequent genome modification in Drosophila. Development 140, 4818–4825 (2013). ((FBrf0223447))
Deleted/replaced sequence coordinates (according to FlyBase genome browse. FB2017_06, released Dec 31, 2017)
> 2R:16628835..16630596 
gtgattgctccaacacaagacgaatttttaggggccgcgaagtcttctaaaatcagtaat
cttactcgaaagttcagatttgacttacaccgttttgctttttataaagattttaaaaat
ctttataaaatatacgattcggctctcttctctttcgaaatccaaatgatttggaaattt
atgttcttcatctgtgatgtataatcctgatcttaatgtatcaaactttcgagtgttttt
aacaactgatttcggaatgattgttgttgtccttgtatcgctccgcgtaaccctgaatgg
tgaaaggtgaatcggcaccacccgatcccgtcgagacgtccccgttcatcaccgttccat
tgccaaccacaccattgatgaccttggcctcggcttcgtttttcacctgaacattggcat
acgactgcttggcatttccgttgggcaaactcttggtcagtgccgagggatccaatgtga
tgccatcaagctgcgaggcgaaggacagcggtggttggatggtcgttggtgtgggctgtg
gtgtgtccaaactgatcagtttggcctcctcaccgccggccaatggaacatcgtggccac
ttccaaccactggtggttccaccttcgagttaggtagtataaatgacgtctcccagcaat
ctccgctggtcggtgcgatattctccaccggccttggatgtggtgcggcgggcgatgtga
ccgccggcggagtgcaggagctcatctgctggcgttgcaattctggcacgtagcccgaac
cactggccatcgatggattgttgctgccgccgggtggcaaaggtaccagataatccggca
ccgccaaacagaactcctcgccattgggcggccggatgactgtgtcgtcccgttcggagg
ctgtgggtcccagaatattgggcagaggagcgttcattatgctggcatcctgggtgcagg
cggtcaaatgctccagcaacgtaataaatgtgggccgatcctcgggcgtgggattccagc
agtcggccatcaccttgtatatggagacgggacactcggtgggcgatcccagtcgaccgc
cacgcacaaccagctccattacctgggtgttatgctggccgggatatggtgaacggccca
gactgaagacttcccacaggagaatgccaaaggaccagacatctgttttcgaggtgaata
tgccatcgaggaaggcttccggcggcatccatttgatgggtagcatcgccttgcctccct
tgcgatagtagtccgatcggtagatatcccgggacatgccaaaatcggcgattttcacaa
cgcgaccaggacccttactgctcagcagacagttcctggcggcgatatcccgatggatga
agcgtttactctccatgtagcgacatcctttggccacgtcgagggcgcagaaaagcagat
ccttcatggttaagagggagggacgctctggagtattcctgttttcgcgcaaaaacttct
gtagatccccgccagcaagaagttccaggacaatataatacggctgacggtcaaagcaga
ctcctattaaatggaccatattcgggtgattgaacttggccattatggccgcctccttca
ggaaatcctcctccttttcccgcttgggatcttcccgcaaggttttcactgccacgccca
tttccacagcatctccgtctcgatggcgatataatgccatatatacctctccaaaagcac
ctttgcccagagcactgaaaac
DOI
Related Publication(s)
Research paper

The scaffolding protein Cnk binds to the receptor tyrosine kinase Alk to promote visceral founder cell specification in Drosophila.
Wolfstetter et al., 2017, Sci. Signal. 10(502): eaan0804 [FBrf0237050]

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