FB2026_03 , released September 17, 2026
Recombinant Construct: M{UAS-SEED-ALFA-HA}
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General Information
Symbol
M{UAS-SEED-ALFA-HA}
FlyBase ID
FBtp0171503
Feature type
transgenic_transposable_element
Component Allele(s)
Size
Expression Data
Associated insertion(s)
Molecular map
Description and Uses
Description

UAS sequences are fused upstream of coding sequence in which the reading frame has been interrupted by inserting a SEED ('scarless editing by element deletion') cassette that contains a Disc\RFPDsRed(T1).3xP3.cHa marker flanked on the 5' side by 3 copies of the target site for the 'gRNA#1' guide RNA (sequence of this guide RNA is GTAGTACGATCATAACAACG) and on the 3' side by 3 copies of the target site for the 'gRNA#2' guide RNA (sequence of this guide RNA is GTACATCCATACAGTACCAG) (both of these guide RNAs have no target site in the wild-type D. melanogaster genome), and with the 5' and 3' parts of the interrupted coding sequence sharing a repeated sequence of ~100bp. If double-strand breaks are induced at both guide RNA target sites (by providing Cas9 and both of the 'gRNA#1' and 'gRNA#2' guide RNAs), single-strand annealing (SSA) repair can seamlessly remove the SEED cassette (including the Disc\RFPDsRed(T1).3xP3.cHa marker) and reconstitute a functional coding sequence that encodes the Tag:ALFA and Tag:HA tags in tandem.

Construct components
Component
Use(s)
Sequence Data
Sequence (FB)
Associated Sequence Data
DNA Sequence
Extent
Segments and Size
Total Size
Left end
Right end
 
Segments
Num
Orientation
Symbol
Reference
Phenotypic Data
Component Allele
Phenotypic Data
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Progenitors and Descendants
progenitor(s)
descendant(s)
Comments
Stocks (0)
Stocks containing insertion(s) of this recombinant construct
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
M{UAS-ALFA-HA-SEED, w+}
M{UAS-SEED-ALFA-HA}
UAS-ALFA:HA-SEED
Secondary FlyBase IDs
    References (2)