FlyBase Transcript Report: Dmel\svr-RE

General Information

Symbol

Dmel\svr-RE

Species

D. melanogaster

Annotation Symbol

CG4122-RE

FlyBase ID

FBtr0070085

Feature type

mRNA

Associated gene

Dmel\svr

Evidence Rank

Length (nt)

3144

Evidence Score

Genomic Location

Genomic Maps

JBrowse

cDNA Clones Consistent with the Transcript ( 92 )

cDNA Clones, Fully Sequenced

Exact Match

Contained within the annotated transcript, internally consistent

LP12324

End(s) extend beyond the annotated transcript, internally consistent

cDNA Clones, End Sequence Only (ESTs)

Contained within the annotated transcript, internally consistent

End(s) extend beyond the annotated transcript, internally consistent

Sequence

Sequence Downloader

CATCTGATCGCAGCCGAGTGGCAACAGTGGTCGCTGCTGCGTTCGCGTACTTTCGTGACTTCATTTGCGATTTTATTTAT
ATTCTCCGTGTTGCGAATAAAATGTATGTATCATGGCAGTTGTTTAAGAAGCGAATATACGCTGATTCATCCTAGGCTGG
CGAGAAGATCATTGCGAAAAAAGTGTACGAAAAGAAAGTGCAATAACTGCAGCTCTATTGTGCGCGCATCTGGGTGTGCG
TAGATCTTTGCATCGGTGTGTCGGTGTTTTTTTACGTTTGTGTGCGTGGCGTGCCCACATTTGTGGCACAAGTTTAAAAA
TTGGCACTAAGAAAGTTCAAGAAAGTGGTTCTGGGGAAAATAGTTCATTCATTCAGCATCCACTTTCTGTTGAAAGTGGC
GCGCCTGCGTTTTGTGTCTTAATCATCGCATTGCTGCCTGCCTACGTGTACAGAAACTGCGAGCGCTCCGGGAGAGTCCC
CGAGAATCCCCAAAATGTTGTTTTTCTGCCTAGCCTTGATCATCGGCTGCGCAGTCGGAGAATACAGCGAAGTCCGGGTC
ATCCAGGAAGAGGACAACTTCCTGGAGAGTCCTCACTACCTAAAAAACGAGGAAATAGGAGATCTTTTCAGCCAGCTAGC
CAAGGATTACCCCGACTTGGCGCAGACCTATACAATAGGCAAATCCCTGGAGGATCGACCCATCTACGCCCTAGCCTTAA
GTGCACCTACCGGGGAGTCCAAGAATGGAGATCTCCTAAGGCCAATGGTTAAACTGGTGGCCAACATACAAGGCGATGAA
GCCGTGGGTCGTCAGATGGTTCTCTATATGGCCGAATACCTGGCCACCCACTACGATGGGGACCCGAAGGTCCAGGCGCT
ACTAAATCTCACCGAAATCCACTTCCTGCCCACCTGTAACCCCGATGGATTCGCCAAAGCCAAGGAAGGCAACTGCGAGT
CGCTGCCCAACTATGTGGGTCGTGGCAATGCGGCCAACATCGATTTGAATCGCGATTTCCCCGATCGCCTGGAGCAGAGC
CATGTCCACCAGTTGCGCGCCCAGTCTCGTCAGCCGGAAACAGCAGCCCTGGTAAATTGGATCGTTAGCAAACCGTTTGT
GCTCTCCGCCAATTTCCATGGCGGAGCTGTTGTGGCCAGCTATCCCTATGACAACTCCTTGGCTCACAATGAGTGCTGCG
AGGAGAGTTTGACTCCGGATGATCGGGTCTTCAAGCAGCTGGCCCACACCTATTCTGACAACCATCCGATTATGAGAAAG
GGCAACAATTGCAACGATAGCTTCTCGGGAGGTATCACCAACGGAGCCCACTGGTATGAGTTGTCCGGTGGAATGCAGGA
CTTTAACTATGCGTTTAGCAACTGTTTCGAGCTGACCATCGAGTTGTCGTGCTGCAAGTATCCGGCAGCAAGCACTTTGC
CCCAGGAATGGCAGCGGAACAAGGCATCCCTGCTGCAGCTGCTGCGCCAGGCACATATCGGCATCAAGGGCCTGGTGACC
GATGCCAGTGGCTTTCCAATAGCCGATGCCAATGTCTACGTGGCTGGACTAGAGGAGAAACCCATGCGCACTTCCAAACG
TGGCGAATACTGGAGGCTTTTGACCCCGGGACTCTATAGCGTGCACGCCTCCGCTTTTGGTTACCAGACCAGTGCCCCGC
AACAGGTCCGGGTGACCAACGATAACCAGGAGGCCTTGCGCCTGGACTTTAAGCTTGCGCCCGTCGAGACGAACTTTGAT
GGTATTAGCAGTTTTTACAGTCCCTATTATTTCTAGAGAGGGATGCAACGGAAATACCTATATATATGCGCATATATATT
ATATTGGGCAGTTCCAAAATGCTATACATATATCCACATTTAGCGATGCATAGTATTCTCTGCTCTCCTGCCCTCTCCGC
ACTATCCTTGTACTATATATGTTATCTCCGCCATTCCCGAATCCAGATATACAACCATTTTGCATGTTCATTTGCTCCCT
CTCATTTAGAACCTTTATTTGTTTACCGCGAGAGCTAGCAGAAAATAAACAATGTTGGCTGTCGTGTGGATGAATTGGTT
TGGTTTTGTCTCGAATCTTTTGTACATACACTTTTTTAATTTATCTTTTAAAAACTTCTGTTTCATTTTTATGTTTTTTT
CGCATTTTCATACGCTTATATGCCAGCCTATGTTCCTTCCACGCCATTACTTCAGACGCGCACATATTTAGTGGATGCTT
GATTTGTATATAGAGAACGTATTAAGAACAAACACGAAGAAATAGCAAACCAAATAACGAAATGAAATAAATTAAGGAAA
TAAGCGAATTGTACTTAGGCAATATGCAGAAATTGGCCCACTTATGGTCATCGAATGACACATTCCCAATACGAATCGGT
TATAGCTTTATCAATATTCCCCTTATCTTCCGCACACCCTAAAACATATTGTCAAGTATTTTAGCAACGATGCAAAAAAA
CTATGATAAATCCAAAGCCCACTACATGAACCTACTGCTAAATATACTGTATACTAAATAGACTGTATGCGCACTCTATG
GTTAGTCCTATCTGGAATGATTGTTGAGCATTTATCCAAAAACAAAAGAACCTACATTTGATAGTGAGGCGAAATTATTA
TCAATTCCGGTCCGACGCGTGCTCACGCATGGCTTTTGATATATACTATAGACGAGAACAGGTTACAATCAAATGAAGAA
TATTGCAATGGCGAGAACCTTGCGAAGTATAAATAAAATATTAATGTTCGCTTGCTGCGTTTTATTTTCATTCATTGCTC
TTTAATTCGGTCTCTAAATGAATTTTTTGTTTTCGAGCACATTATTGGTGTTTTCAAAATCTGGTGCAGTGTTTTATTAA
TCACTCGTTTTTGAAAAAAATGAGATTTTATTTGAGATCATTTTCAATTCATTAATCATCGAATTCAGGACATATTTTTT
CTTTATTCTGATCTTTAGCAATTTTACTTTCTTTTTGGTTTCGCAGTACGACTTAGTTTTTCCATTTTTCTTTTGTTTCA
AAGGCCTTATATGTAGCCTAACGGTGGAGTCATGGTTAGGGACGTTCAAGAAACTCCCAGTCACATCTAAATGAAATTTA
AAATGTATCTTTCACTAAGTACCT

Other Products of this Gene

Other Transcripts

Name

FlyBase ID

Length (nt)

svr-RB

FBtr0070081

5890

svr-RD

FBtr0070084

5904

svr-RF

FBtr0070086

3130

svr-RG

FBtr0070087

5828

svr-RH

FBtr0290016

5842

svr-RI

FBtr0290017

5267

svr-RJ

FBtr0340146

3092

svr-RL

FBtr0344737

2851

svr-RM

FBtr0344738

5611

svr-RN

FBtr0344739

4986

Polypeptides

Derived from THIS transcript

Name

FlyBase ID

Length (aa)

svr-PE

FBpp0089124

433

Derived from OTHER transcripts

Name

FlyBase ID

Length (aa)

svr-PB

FBpp0070080

1406

svr-PD

FBpp0089123

1404

svr-PF

FBpp0089125

435

svr-PG

FBpp0089126

1439

svr-PH

FBpp0288455

1437

svr-PI

FBpp0288456

1292

svr-PJ

FBpp0309132

433

svr-PL

FBpp0311069

435

svr-PM

FBpp0311070

1406

svr-PN

FBpp0311071

1439

Comments

Short protein isoform supported: short transcript isoforms well supported (FBrf0155853, multiple cDNAs, RNA-Seq data), resulting in early termination.

Isoform designated 1A "short" form in AF545819

Transcript terminates at site supported by polyadenylated cDNA.

External Crossreferences and Linkouts ( 1 )

Crossreferences

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

NM_206598

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

CG4122-RE

(FlyBase, 1996-)

svr-RE

(FlyBase, 1996-)

Secondary FlyBase IDs

References (2)

Report Sections

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