FB2026_02 , released June 18, 2026
Transcript: Dmel\Vsx1-RA
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General Information
Symbol
Dmel\Vsx1-RA
Species
D. melanogaster
Annotation Symbol
CG4136-RA
FlyBase ID
FBtr0070781
Feature type
mRNA
Associated gene
Dmel\Vsx1
Evidence Rank
Length (nt)
2983
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 17 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TCAGTTCGTTTTCGAACGCCGCACCGAACGCTCCAGCGCTCAAAAATACACAATTAGATAAAAACAATAAAAGCAAATCC
ACAATTGCAACCCACACAAGTGCGTGAGTGAACTTTTTTTCCTGTGTAACGTGTACGTGTGCGTGTGCTTGCCGCAGCTG
CCATGAGAGTGTGCAATAAATAGAAACTTGGGAACTCCAATCGTTTTTTCGAAAACAAACTGCAAACTGACAACCCAACA
AAGGGGTTTCGCATACAGTGTACCACCAATAATCGAAGTACCGTCGGCAAAAATGCAGGCCACCAAGATGCGTACGCCGT
TTGCCATTCAGGAGATCCTGGGACTGGGCGCCTATCAGCAGCAGGCCACTGCCAGTGCCACGCCCTCCGAGGCGCCACCC
TCGCCGGCCGCCACGCCGCCGCCCACAGCGAATACGCCCGCTAATGGCTCGCTATCCGCCGTACAGCAGCAACAGCAGCA
GCAACAGCAGCAGCAGCAACAACAGCAACAGCTGCAGCAGCAACAACAGCAGGCGATTGATAGCCTCCGCGAATCCCGAT
CCATATCGCCGGATGTCTCCAGACTCTCGGCCGCTGCAGCGGCGGCGGCAGCGGCTGCCGCCCACTGCCAATTGCCCGTC
TTCAATCCGGCCAACTTCTATGCCGCCGCCGGCTATGCCGCTGCAGCGGATCCGGGCAACGCGGCTGCAGCCCATCACCA
CCACATGACCACCTTGGCGGCGGCCGCCTATCTCCGGGGATTCCTGCCGCCCGGATTCAGCACGCCCCACGAGTTTCGGG
GCCACTTCCAGCAGCACTTCGGCGCTCAGTTTGCAGAACAAGCTGCCGCTCGTGGCCAGGAGTACGCCAGCAGTTTGGCC
AATGCCAGTGGAGATGAGCAGTCGCCCAGCAAGAATAGCAGTTCATCGGGCAACGGCGGATCCGGCGGATCGGGATCAGG
ATCTGGTGGCGGCAATCCGACCTCGAATGGCCTCGGGCACCTGGGCTCGCCAACGGCCAGCAATGGTGGATCCGGCGGTG
GAGCCGGTGTGGGCGGATCGGGCGGTGGATCGGGCACGTCGGGCAGCAACTCCTCGACATCCGGAAACGGCGGTAACGGC
GGCAGCTCCGGCAGTCGCTCCTCGCCCGCTGGTCCGCATCACTCGGCCGCACTGGCTGCCCATCAGCATGCAGCGGCTGC
TGCGGCCGCCGCTCATCATCATGCCGCTGCCGCTGCTGCCGCCCATCATGCTCACCACGCCCACGCCCAGGCGCACGCTC
ATGCCCACGCGCATGTCCACGCCCATGCCGCTCACGCCGCCCATGCCGCCCACGCCCATGCCCATCATGCCGAGGCATTT
CTGGGAGCAGCGGGCGGAGCTGGAGGCAATCCCAATAGCCTGCTGGCCGCCCATGGTGGCGATGTTCTTGTCGGTCCTGG
CGGCACGGGTCCCGGCGGCAAGAAGAAGAACAAGCGACGCCACGGACGCACGATCTTCACCAGCAGCCAGCTGGAGGAGC
TGGAGAAGGCCTTCAAGGAGGCACACTACCCGGACGTGAGTGCGCGCGAGCTGCTGTCCATGAAAACTGGCCTCGCCGAG
GATCGCATTCAGGTGTGGTACCAGAATCGCCGGGCCAAGTGGCGCAAAACGGAGAAATGCTGGGGCCACAGCACCAAAAT
GGCCGAATACGGATTGTATGGAGCGATGGTGAGGCATTCGCTGCCACTGCCGGAGACCATCATCAAGTCGGCCAAGGAGG
ACGAGTCGGTGGCGCCGTGGCTGCTGGGCATGCACAAGAAGTCACTGGAGGCCGCCGAGCTGCTCAAGAGCGACGAGAGT
GACCGGGAGACGCCCACCTCGGACGATACGAACACCAGCTACTCGGCGGGCAGCACCCATAATTCACCGATCTCCAGTTT
CTCGATCTCGCGTCTCCTCTTTGACGCCCCACCGCCGGCGGCGGGTTCCGCTGGTGGCAAGGGACACCACCACCATCATC
ACCACCACAAGGGCCACCATCATGCCCACGTTCATGCCCAGGCGCAGGCGCACGCCCACATGCTGCTGCACCACCAGCAG
CAGCAGCAGCAACAGCAGCAGCAGCAACAGCATCACCATCACTTGCACGCCGCAGAGAATTCCTTGCAGCAGCAGCAAGT
TGCTGGAACGGGCTCGGGTTCGGGATCCGGTTCCGGGTCGGGAACGGGTGCGGGCTCGACTGGGCCACCAGCACACCATC
CGTACAACCAGCAGCAGCACCTGCACCACCTGCAGCAACTGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGGCGCAGCAG
CAGCAGCAGCATCACCACCACCAGCACCACCATTCGGTGCACCATATGCACCACCACAATGCTGCGGCCGGCTACGCCGA
GGCAGCGGTGGCTGCTGCAGCGGCCGCAGCAGCTGTTGCCGCAGCAGCAAACGCACGGAATGCAGCGGCGGCAGCAGCGG
TGGCCGCAGCCTCAGCGTCCGCCTCCGCAGCCGTGACCATTGCGGAATCGGAGGCGGAGGAGGAGCAGGACGACATCGAG
GACATGGAACTGGACAAGGACTGTGAGGTGGAGGAGGATGTGGAGCCCGTGGATAACGATACCAATACCAACAACGAGCA
CGACAACGAGTGCGATGCGGATGCGGATGTTGAGGCGGATGTGGATGCGGATGCGGATGCCGATCCCGAGATAGACATCT
GCGACGACCACGACGAGGAGATGCGTCTGCAGGAGCAGCTCCTGCTGAAAGTGAAGCAGGAGCAGGCGCATCTGGGGTCC
AGATGAAACATGTACATCGATGTGTTGTTCTAAGGACAACGATAAACCTACAGGATTCGAAACACATCCGGCTAAATGCA
ATGAACCATTTTGTATGCGCAAACGGGCGAAATTTCACGGCCCACGATAGAAATCGAATAAATTAATAGCATTACATATA
TGACAGAAAATTAAGCAAAAAAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Vsx1-RB
        FBtr0340495
        3633
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Vsx1-PA
        FBpp0070747
        837
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Vsx1-PB
        FBpp0309431
        837
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG4136-RA
        (FlyBase, 1996-)
        Vsx1-RA
        Secondary FlyBase IDs
          References (2)