FB2026_02 , released June 18, 2026
Transcript: Dmel\Trf4-1-RE
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General Information
Symbol
Dmel\Trf4-1-RE
Species
D. melanogaster
Annotation Symbol
CG11265-RE
FlyBase ID
FBtr0071213
Feature type
mRNA
Associated gene
Dmel\Trf4-1
Evidence Rank
Length (nt)
4400
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 58 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TAAATAATACTAATTGTTTATAATAATCACAATGTTTTTAACGAATTTAGTTGGTGATGCGTCCTGTCAGTTGAGTAGGT
GGGAATAGCATGGACTTTCCCCAAATAACAAATGCTAAGTTGGGTTTTTTTAAAATTGATTTAATACATTTTTTTTATGT
TACAGTTAAATTTGAAACTATATTTAACAAGCAATTTGGATGTCATCGATATTTTGTAATAGGACCATTCACTTAGCGGA
GTCATCAACCTTGGCGAATCTAGCGAGCACATCCACCTCTCGCTTATCAGGTCTATCGATAACATCGCTCATCAATCGAT
TCGTGAACCAGCTCTATCGCGAAACGGTCGCGTGTTCGCACGCAAATTGCAATATAAATCCACAGAAATTGACAGGGAAC
GTTGCTAAAGGGCGAAAAACAATCGTGCCGCGATTGAGGCCTGCGATCTGCACAGGAAATGCACAATTGCGAAGCGCAAT
TTGATAAATTCGCACTTGAATGCTGACAGCATTCAAAGAGGTTTAGTCCCGGCAGCGACTTTAATTAATTTTTCCCTGTG
GAGCACAAAGATCACATCGGATCTATATAGAGTCACGTCTATATATTCAGACCACCAGGACGCAGAGGATAGAGGTGAAA
GGACGAAGCGAAGGAGAGACGCGCGCCCCCCTCGTTTCCCGCCCAGCCAACAGCCGTGTGAACCCGTCTTGAATGGATCC
ATTTGTTGGCTGGTTTCAGAAGGAACAGGAGGGACCATCGCTGTGCACATGGTTAAAGATTTGGGAGACGAATGCCCAAG
AGATGGGCGCATTGCTTAATCAACAGCTACAGCAGGCGACGACGATCAACGGGAGCACGAGCAGCAGCAGCAGCAGCAGC
AATAGTGGTAACAACAACAACAACAACAACAATAACATCATCAATAACACTATCACCAACACGACCAATAACACTGGTAA
CAATTCATCGGCCAAACCCTACTTATCGCGACCCTACAGCTCGCTAAATCGGGTGCTCAATTTCCGAGCGGATTCCCTGG
AGATCCTGCAGCAGCAACAACAACAGCAGCAGCTCAACGGGACCACTCAGCGCAACAGCACCAACATCAATACCACAAGC
GGCGGCAGCACTAGCTCGTCGGCAGATTCCACCACGAATCGGGACAATAACTCACCCGCCAATAGCAGTTCAACCAACGG
ACCCGGAGCAGGAACGGGAACGTCAACAGGAGCAGGAGGTACCGGTACAAATAGTCCGGCGACGACAGCGTCAAGCACAG
CTGCGACCACGACTGGTCCAGCCACTAGTATGAGCGACACCAGCAACAACCCGCCACAATCAACGACCACGCCCGCCAGC
CGCACGAACAGCATCTACTACAATCCATCGCGGAAGAAACGACCGGAGAACAAGGCTGGCGGAGCCCACTACTATATGAA
CAACCATATGGAGATGATCGCCAAGTACAAGGGCGAACCGTGGCGCAAGCCGGACTATCCGTATGGCGAGGGCGTTATCG
GGCTGCACGAGGAGATCGAGCATTTCTATCAGTACGTCCTGCCCACGCCCTGCGAACACGCCATCCGCAACGAGGTGGTC
AAGCGTATCGAGGCCGTTGTCCATTCCATCTGGCCACAGGCAGTAGTCGAGATCTTTGGCTCCTTTCGCACTGGCCTCTT
TTTGCCCACCTCCGACATAGATCTCGTTGTGTTAGGTTTGTGGGAGAAGCTGCCGCTGAGAACGCTGGAGTTCGAGCTAG
TGAGCCGTGGTATCGCCGAGGCTTGTACGGTGCGTGTTCTGGACAAGGCATCAGTGCCCATCATCAAGCTGACGGACCGG
GAAACGCAAGTGAAGGTAGACATATCGTTCAACATGCAGAGTGGTGTTCAGTCGGCGGAGCTGATTAAGAAGTTTAAGCG
CGACTATCCAGTGCTGGAGAAGCTAGTGCTTGTGCTGAAGCAGTTCTTACTACTTCGCGATCTCAACGAGGTGTTCACGG
GCGGCATCTCCTCCTACTCGCTGATCCTTATGTGCATCAGCTTCCTGCAGATGCATCCGCGCGGTATCTACCACGATACA
GCCAATCTGGGGGTGCTTCTCCTCGAGTTCTTCGAACTTTATGGACGTCGCTTCAACTACATGAAGATCGGCATCTCCAT
AAAGAACGGTGGCCGCTACATGCCCAAGGATGAGCTGCAGCGTGACATGGTCGATGGCCATCGACCCTCGCTCCTGTGCA
TCGAGGATCCGCTGACGCCAGGCAATGATATCGGTCGAAGCAGCTACGGCGTCTTCCAGGTGCAACAGGCATTCAAGTGC
GCCTACCGCGTGCTCGCCCTTGCCGTCAGTCCGCTCAACCTTCTCGGCATCGATCCGCGCGTCAACTCGATACTGGGTCG
AATCATTCACATCACCGACGACGTGATCGATTATCGCGAATGGATCCGCGAGAACTTCGAACATCTGGTGGTGGTGGATC
GTATCTCGCCGCTGCCCACTGCCGCTCCCACTGCGTACGCCACCGCCAATGGGGCGCCAAAATATGTGATTATGCCCTCG
GGCGCCGTTGTCCAGCAGCTGTACCATCATCCGGTGCAGGTGCCCACCGCTCACGGGCACAGCCATGCGCACAGCCACAG
TCACGGGCACGCGCATCCTGGCGCCCATCTGTGCCAGCCGTATGTGACCGGGACCACTGTATCTGCTGTAACGACGACTA
CAACGATGGCGGTGGTGACCGTGGGCGTGTCAGCCGGCGGAGTCCAACAGCAGCAACAGCAACAGAATGCGACGGCCCAT
ACCCACTCGCAACAGCAGACACAGAACCAATCGCAGTCGCGCCATAGACGCGGCAGCACCTCGTCGGGCGATGACTCCGA
GGATAGCAAGGACGGCGATGTTGTCGAGACGACGTCGAGTGCTCAGGAGGTCGTTGACATCGCGCTATCGACGCCAAATG
GCCTGGCCAACATGTCCATGCCCATGCCAGTGCATGCTGTCGGAATGCCTGCGTCGAACAGTTGGAGCGGTAATGGCAAT
GGAAACGGAAACAGCAGCTCATCCACGGGCTCGTCGCCGGAAATCGCACACATCGCTGCCCAGGAAATGGACCCCGAGCT
TGAGGATCAACAGCAACAACAGCAGCACCAAGAGACTTCTGGAGGTAATGGCTTCATCCGACCGGGTGACGTCGGCACCG
GTTCCAACAGGGGAGGCGGTGACGGCAGTGGCGGCCGCAATTACAACCAGCGGAACAACCACAACTCCAGCGGCTACTAC
CACCAGCAGTACTACGTGCCACCGCCGATGCAACAGCAGCTGAGCAAGTCCAACTCCTCCTCCAACTATCACCAGCAACA
CCATCACAGCCACAGCCATGGCAATCATAGTCACCGACAACAGCATCACCACCAGCAGCAGCACCACCACCAGCAGCGGC
CGCAGCATCTGCGTGTGGGCGGCGGCAATCGATACCAGAAATCGTTGGGCGGATCGCCCATCATCAGTGCTGGCAATGCG
TCGAACAGCAGCAGTAATTGCAGCAACAGCAGCAGCAGCAGCGGCAGCAACAACAGCCGACTGCCGCCGCTAAGGGGCAC
GCTGGTCAACTCATCGTCAGCAATATCAATCATTTCCATATCCTCAGAATCATCCATTGCTAGCAGCAGCTCCAGTTCGT
CAAGATCCGGTCAGGATCAGCAGCGTGACGAGCGATAGGAATAGGATGTAGGAAGATATTGTGTATGTCTATGACACAGA
GAGAAAGAGAGTGCGACACAGAGGGACAGAGAATGAGAGAGAAAGAGATAGTTACGGTGTTAGCAATATTTATGGGTTAC
ATTTCTTTCTCAGGTTAATTGTAAACTACGCTGCATTTTTCTAATAAATATCATTGACCCCCCCGCCCCCCCGCCTCTAC
CTAATCCGAAAGCATCTCCTCAACCAATGTAACTGCGATCAGATTTTCTTTTACACTGCTGTCTTGCTTAAATTGGGAGA
GCGACGCAGACCTACTAAGCCTAGTGTTAGGAACTTTGCCTCTGATCGCGCTAAATGTATTTCAGTTTGTTTCTAAAATA
AACATGAAAGCAAAGAATATATATATATATATATATATATATTTATATATATAGATATATATTAAATTAAATTAAATTGT
ACCATAAGCATAACTGTTAGCTCATAAGTAGATTGTAAGGGTTTAAAAGATCGATAAACTGAAGTATGAAATTATGCTAA
TCTCTTTTCCCATACCCCCCCCCCCCCCTTTTTATCCATCATCATGCGCATTCAAGCTTCTAAAGTATTTTGTAGTTTCT
GAAATGCTCTCCGTCTAGTGCAATGGTAAACATTTTTGCAAACGTAACTAATTCCCTATCCACCCCATTTCCTGCCATAC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Trf4-1-RC
      FBtr0071212
      4205
      Trf4-1-RF
      FBtr0112963
      3981
      Trf4-1-RG
      FBtr0112964
      6507
      Trf4-1-RH
      FBtr0331723
      3975
      Trf4-1-RI
      FBtr0331724
      4238
      Trf4-1-RJ
      FBtr0331725
      6812
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Trf4-1-PE
      FBpp0071159
      1001
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Trf4-1-PC
      FBpp0071158
      1001
      Trf4-1-PF
      FBpp0111876
      802
      Trf4-1-PG
      FBpp0111877
      802
      Trf4-1-PH
      FBpp0304112
      1001
      Trf4-1-PI
      FBpp0304113
      1001
      Trf4-1-PJ
      FBpp0304114
      1001
      Comments

      Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG11265-RE
      (FlyBase, 1996-)
      Trf4-1-RE
      Secondary FlyBase IDs
        References (2)