FB2026_03 , released September 17, 2026
Transcript: Dmel\CG5539-RA
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General Information
Symbol
Dmel\CG5539-RA
Species
D. melanogaster
Annotation Symbol
CG5539-RA
FlyBase ID
FBtr0072123
Feature type
mRNA
Associated gene
Dmel\CG5539
Evidence Rank
Length (nt)
1078
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 8 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
    cDNA Clones, End Sequence Only (ESTs)
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CAGTTAGATACACAGGCACATCGATCTTAAACTGCCAATTTCGATTATAGCCCATGCATTAAATTCGGAATTTTCCAAAA
GAAGAACACTTATTCTGGCAGTCCTAGTATCCACCGTATATTTTAGATATGTGTTTCTTTGGCCTTGTTTCGCAGTTCCT
GTTCTTCGTTTACGGCACCATGGGACCGGCCTGGCAAACCTATAAGACTCTGAACAGCGGAGACGAGGAGTTCCTGGCCT
GGGCCAAATACTGGATAGTTTACGCCTTCCTGGTCACCTTCGAGGTGCTGGCGGACGTCTTCCTCTCCTGGCTGCCGCTC
TACATGCCCACCAAGTTGCTCCTGGTCGTGTGGATCGTGCTGTCCGCTCCGGCCGCCAATGTCTGGATATTCGACGCCAT
CCTGCGTCCGGTGCTGGCAAAGCGGCAGGAGGAGATCGATCACTTCCTGCACCGGGGCAAGGAGAAGCTCCTGATCGACG
CCCTCGCTTCGATGACACAGCTGGTGGCACAGACCCAAATCTCTGTACTGCCTTTCGTGTCCAGCTTCTGGTCGAGATCG
AGCACTGCTCCCCTTAGGACTTCCGATCTGTTGCAGGACTCCACTGGAGAAGGAATTGGAGGCAGAACTTCCGAGGATAC
TGACTCGGCCAACGTCTCTGTCCAAAATCTGTCCAGTGGTTCCAGTCCCGTTGGCAGCTTAGAGCACCTCCGTGACGACT
CTGAGGAGCTTCTGGTGGGCGTTTCGAAGGCCACCACGCACCTGCAGGCGGAGCAGTTCCAGAGCGACGTGTCGTCGGAA
TCACCCAGGATAATTAATCGCCGACCTCAGCGCAAGTTCAAGAATGCCATTGCTATTGCCTCCGCCACCAAGCTGGAGGA
CCTCCATGACGATGTGGAGGATCTGCTGGCCAAGACGGCGATGGAGACCAGCGGCCAGGAAGTGCGTCAGCAGCGTCAAC
CGGCCAGCCGTCGCCGTCTTTTAGCACAATCATTTGTGAAACCTCAAACAGGTTTATAGTTATTTCATTAATTCAAAACA
TAAATTGGTTTTAGGCATGGATAGGTTTCAAGTTGTTT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      CG5539-RB
      FBtr0343269
      1334
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      CG5539-PA
      FBpp0072032
      296
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      CG5539-PB
      FBpp0309934
      296
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      CG5539-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)