FB2026_02 , released June 18, 2026
Transcript: Dmel\Ctl1-RA
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General Information
Symbol
Dmel\Ctl1-RA
Species
D. melanogaster
Annotation Symbol
CG1311-RA
FlyBase ID
FBtr0073232
Feature type
mRNA
Associated gene
Dmel\Ctl1
Evidence Rank
Length (nt)
2487
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 59 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TTCTGGTCACACCTGAGCATTGAGGATTTAGGCGTTGTTGTTGTTTCGTCGGTTGTGAATTGAATCAAAATAGAACAAAC
AAGTTGCTCAACATACTGAAGGAATAGATATAAGTACAAAGTGATAAGAGGAAGTAAGCCCGCTAATTATCGAGCAGCTT
AACAAGTGCAAAATGGGCTGTGCGGAGAGCAAGGACGGCGAGGGGGAGGCGCAAAACAATAGGCCCAAATACCGGTCCTG
CACGGACACCTGCTGGCTGGCCATTTACATTATATTCTGGCTGTTTTTGATAGTGATTGCCATCTTTTCGTTCGTTTATG
GAAATCCCCTGCGCATCATCAATGGCTACGATTCCTTTGGCAACACCTGTGGCGTTAAGTACAATGAAAAGTTCCAGGGA
TTCCCGCTGTCCGGCATGAATACACTCGACAAGCCGGAGCTCTTCTATTTCGATGTCAAGGAGCTGAAAAAGTCCCTCAA
GATATGCGTTAAGTCATGTCCCGCCAAAACTATGACCAAGGGCAGCGAGCTGCTGGAATACTACAGCCAAACGGGCACAC
AGCTCTGCAAATACGACTACAACATGCAGCAGCTGACTACGGCGGGCAACGATGCCAAAACGTTCAATTTCCTGGGCCCA
TGTCCCAGTTTTCCCGTTCATGAGAGTTCGCCTGTCCTACATCGCTGTGTGCCCAAGGGTACGGGCGAGAAGGTTCAGAA
CTACTACGACATGCTCAACAACTGGGATGTGGCCCAGCAGTTCGTTGGCGATATCTACTCCACCTGGCACATCATTGCCA
TGGTCTGTGGATTAGCTTTGCTCATTTCCATTGCTCTGGTAACCATGATGCACTGGCTGTCTCGCATCGTCTCCTGGATC
ATCTGTGTTTTGGTCATAGTGGCCAGTGTGGCGCTTACTGTTGCTCTGTGGTATGCCTACTACAACATACGCAATAAGTC
TGGCGTTAACACACAGTACTCTATGCTGGAGGAGTTTGTGCGCAACCAACAGGCAGTCTTAACCCTGGCCGTTCTGGCCA
CCATAACCATGATAATCCTTATTGTGGTCATATACTTCTTGAAGAACAAATTGGCTGGCTTATCTGCGCTTTTCGAAGAA
GCTGGCCAGTGCATGATGAATCTCCCAGGTCTTTTGATCGCTCCGCTCTTGGCCTTCCTTGTGCTTATAGCCTTCTTAAG
CTTTTGGGTCGCAGTGATCATTTGCCTGGCCACTGCCAGTTCACCTGGACAAAGTCCCATTGCTCCGTTCGACAACTCGA
AGGCCCATCAACAGCCTTTGCCAGCAAATGCATTGTTCGTTTCCAATAGCACCGACGTCAATGATTTAAGACCAAATGCC
CGTGTAGAATATGCCGATGCCGGAGTTCTTCGCAGCATGTTCTGGATCTATGTGGTGGGTCTTATATGGACAGTGGAGTT
TATTTTCGCATGCCAGCAGTTTGCATTGGCCGCAGCCGTGGCCTTCTGGTACTTCCAAAAACCGACCAGCACGCCCACGT
TTTACGCCATTGGCAAACTGGTTAAGTATCATTTGGGTACGGTGGCCAAGGGATCCTTTGTCATCACTATTTTCAAGATT
CCCCGCCTGATACTCACTTATTTGTACGCCAAATTAAAAAAAGGCGAGGACAAGGGATCGGAGTGTGCCGCCTGCTGTTT
GAAGTGCTGCATTTGTGGTTTCTGGCTGCTTGAGAAGTTCATTCGCTTCTTGAATCATAATGCCTACACCGTGGTGGCTA
TCGAATCCATTAACTTCTGCCCCGCTGCTGGCATTGCTTGGAATGCCATGGCCACGAATGTCCTGCAAGTGGCCACCATT
AACAGTGTGGGCGACTTCATTCTCTTCCTGGGAAAGGTTGTGGTGGCCGCGCTCTCTGGCCTGATTGGTATCGTTTTGCT
CAAGGATAAGCCCGGTCTGAATTTCTACATGGCTCCCGTCATAATCATCATCATATTCTCCTTCTTTATTGCTCACATTA
TCCTCTCGCTTTTTGAGATGGTAGTGGATACCTTATTCCTCTGTGTCTGCGAGGATAAGACCCTGAATGGTCGCTCTGGT
CGTTGGGCACAGAGTAACTTGGCCAAGCTGGTAGGCGAGGAACCGCTGCAGCCTGGCGAGGAGCCGCCCATCGAAGTTGT
TCAAATGATGCCCATCAACAAGCAGCCATTTAGTATTACCCGACTCCCTCAGTCCGATCCCGAGGTAGCTCCCATGTCGG
CGGATTAGTTCTAAGACGCAGCTAGATGCTTTCGCTTTTGTATTCCAAGCGCAGAACCCCCCGAAACTCAACGCACATCT
CATTAGGATGTTAATATTTATATACATACCATTACTCCGTCGCGACGTACAAAGCAGAACAGTGGGACTAATAATAACTG
GTAATCTTGTCTATTGATATATTCAAACTTAGGATGCACAGTTTGTAAACGTATTTATAAAGTTTAATCGTTTTTGTATC
TTAATGT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Ctl1-RB
      FBtr0333566
      2472
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Ctl1-PA
      FBpp0073088
      691
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Ctl1-PB
      FBpp0305743
      686
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG1311-RA
      (FlyBase, 1996-)
      Ctl1-RA
      Secondary FlyBase IDs
        References (2)