FB2026_02 , released June 18, 2026
Transcript: Dmel\CG5541-RA
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General Information
Symbol
Dmel\CG5541-RA
Species
D. melanogaster
Annotation Symbol
CG5541-RA
FlyBase ID
FBtr0073958
Feature type
mRNA
Associated gene
Dmel\CG5541
Evidence Rank
Length (nt)
2514
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 192 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      CTCAGTTTGTCATTTGCACGCGCTTACGCCGGTTGGCCGCCCAACAAAAACAAGGCTGTAGAATACATAAACCGCCTGAC
CGACCGCTCGCGTGTTTTTAGTTTTAGCAGCTAATATAAATACATAAATGCGACTATTTACTTGGGCAATTTGCGACTAA
GATAAGAAACACCTTGAAAGATAAGGCTGGAGCGAAACGGTCTATAATCGGCAGTTCTACGGAACGCTCACGGCGAAGAG
CAGTGCACAGCGGAGCGGACGGTAAACACAACTAGAAAATGAACAAAGAGTGGACCGGAGAATAGAGAAGGCGAAACGAG
CGAGGGCGCGCAAAAGGCACCAGTTAATATGAGTGAATAATTGGCCACAGGCGGATCAGTTGACCAATCATGCGGAATAT
CAGAAATCTCAAGGATCCGACGACATGGACGCGGATTCTCCTGCCGTTCCTCTCCTGCCTACTCCTCGCTGTCCAGGCGG
ATCTGGTGAATGTCACCTGCGGGGAGTATGGCAATACCATCACTTGCGACTGCAATAACTCCGACCAGACCATGGCTTTG
CCATCGTTGCGCGGAAATGTCTACATGATTGAGATCCGCAATTGCCGCGATCTTCTGGTGGAGGCCAATCGGCTGGCGAA
CACGATGGGCCTGCACAAGGTGGTCTTCCGCCAGGTGGGCCAACTGGTGCTCCGGGAGCACGCGCTCAGTGTGCCGCGAT
ATGCCAGCAATAAGGCACTGATCGTGGAGTTCGAGCAGACGAACCTCAAGCTGATCGAATCGCATGCCATCAACGGCAAC
ATCGAGGAGATCTCATTCGTGGGCGGGCGGATTGAGCTAATGAAGCCTTTCGGATTCACCACCACCAAGGATAGTGCCAT
ACTGCTCAAGCTGGACGGGGTCACCATTCAGCGCATCGAGAGTCAAGCCTTTAAGAAATTCGCCGTGGAGCAGATGAGCA
TCGCCAATTGCCAATTCCTGGGCGATCTGCCCACGCGTGCCTTCTACGAGCTCGAGGTGACCAACGAGCTGAGTCTGCGA
GGTAATCAGTTCCAGGAGGTCCACTCCCATGCCTTCTCCTTCAAGCTTGTCTCCAAGTTAAGCCTGAGTGATAATCATTT
CCTATCCGTCGATGGTGAGTGGTTGGAAGCCCAAATCAGAGATGCGGCGACAATACGAGGAAACGAATTCGGGGCCACAA
GTGAGATTGCGTTTCGCAGCCTCACCGTTCATCGTTCGTATCAGTTGAGCGAGCGTCTGGAGCTGCGTTTCCACAACAAC
AGTCTGCGCAGCTCGCGACCAGGTGCAGATCCTCGGGTCGATGGCACCGCCGAGAATGTGGCACCACAACCCCTTCAATT
CGACAATAGCTTCGCGCTCAATGTACGCGATATCCGCTATAATAATGCCTGGAGCTGTGAACAGCTGGACAGGAATGTGG
AGCCACCATTGCCGCGAGCGGAGTTCTTCCGACTGCACAGCGATCAACTGATGTTCCATCCGCCCGATTTTGGCGGACAA
GGCCAAATCCAGCCGTATATCCCACTTCGATCCCTGATCACGGATGAGTGCCGCGAGCGCAGCTACATGGCCTTTATTAT
CTCGGGTAGTGTTCTTCTGGGACTACTGCTGCTCCTCCTGATCCTTTTGCTGTGGTGGCGAGTAGTCCAAAAGCGACGAC
GTCGTAAGCTGGACGTAGTGCAGCCGGAACCGCGCACTTACAAGGAAACCCAGATCGTATACCAAATCGAGAACGCTGGC
CTGCTAAAGACTGATTTGTAGACGGCAAGGAAAGACACATAGATCACAGATGCCTGTTTTGGACTGTTTTTCAGTACCAT
AGCAGATCATCTACCCACAAGAGACACACAGCTGAATGAAGCTAAAAGGAGCGGTGGGCGGTGGAATGGTTGGAGCACCA
TTGCCACCATTACCACCACCGATCATACAGAACCACCAATGCGTGACCTTTCGCTGTACCAAAACCATAGCCTACAGTTA
GTCGTAATATATCTTAATCTAATTATTCATAACTCGCAATGTTCGTCAGTTGTAAGTGGCCCATGTATATAGTCGCATGT
AGGCTGGGATCTTGCCCAAAAATATCCAGGTGGATTAGCCATATCCCACCAAATACGTATGTATATGGAATAAATCAATT
TAAAGCCAAAATGTGGTGCTCTTAAATGTATATGCTACATATGTACATATATGTTAATACTATTTGGAAGCGTAATTTAA
AATAACAAAATTTGGAGGACAAAGTCAGCTAATAAAATATTGTATACAAATTGCGGATGACAGACGAGATGTACGTGTAA
ACAAAAGTTTTATTGATCCCTATAGCTTTCGAAAATATTTTTAGAAACTTGACACATGTTTACAAGATAATCATAAACTT
TCAAAGGGAAATAGTGTTGGAAGGAAGCCCATTTTTGTTTACGATATTTAAATATTTATAAATAATATTATATTTCCCAT
TTCCCAAATACATTACGATTTAAATAATGATAGT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      CG5541-RB
      FBtr0073959
      2304
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      CG5541-PA
      FBpp0073775
      463
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      CG5541-PB
      FBpp0073776
      463
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      Transposon inserted in intron

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      CG5541-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)