FB2026_03 , released September 17, 2026
Transcript: Dmel\upd1-RA
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General Information
Symbol
Dmel\upd1-RA
Species
D. melanogaster
Annotation Symbol
CG5993-RA
FlyBase ID
FBtr0074581
Feature type
mRNA
Associated gene
Dmel\upd1
Evidence Rank
Length (nt)
2642
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 4 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GTCTAAATTAAAAAGTTTCCCCGCCCTCAATATACACACATATCGCTCTGGAAAAGACAAAAAAAAAAAAACAACGAAAA
GCAAAAAAAACCGCAAAACAAACATAGAGAAAATGTTAAAAAAATCGAACCAAATTGTTGAGACTGTTGTCTGGTTGCAG
TTGCATTCGCATTGAAGGAGGCTCGGCCGATCATCCGACCCGTAATCCCGATCACCTCAGAGCTCCAGCATCGAAGCACC
CGACCACCCAATCCCACCCAGTAACCCATCCACTCCCAAGGGAGTCCAGTTAGTTAACCATCTAGTCAGGGAGGAACAGT
GATAGCAGTTGATCGTTGGTCGTCGCGCGTTGTAGCAGAAAATTGAATTTACTTTTGCATTCTCGATACTCATAGTGTTT
TTTCTCCACATCTCTTCCCTTCTGACCCCCCATCCCCACCCTTCACATATATCCTATATATATATATTGTAACCCCGTTC
GCTGTATCTGCACACTGATTTCGATACGGACCGCGGACAGTAGTTGGTTGGCAGTGCGCTGCGACCACAGCTAAAAACAG
CACCACGGCAGCCGGCAACGGAAACGGAAACATCAGCGGAAGCGGTAGCGGTAGCGGTAACGGATTCCGGCGCAGAAGAG
AAAGTGGCTACCATGCGGCGATGGCTCGTCCGCTGCTCCTGCTCCTGCCCATCCTACTCGTCCTGCTCCTTGCCGCCCAG
TTGCCCCACCTCGCCGAGGGGCGCAGCACCACCAGCAGCGGCGGTCTAACGGTTATCGATAGCGAGCGCCTGCGCATTCG
CACCACCTCCAGTACGGCTTCAGCTCAGCATCCCAATCAGGGCACGATCCCTGCCAGCGCCGCTAGTCCGCGCAAGCGCC
ACAGAAAGCGGAACAGCAACTGGATCGACTATCGCAACTTCGACGAGAACACCACCGCCCTGGAGTGGGCCAATCCCTGC
GGTGGCAACTATCATCCCTCGGCGGGTGATCGCTTCAATCGCCAGCGTCCCAGGCAGAGCTTCAATCAGCTGAAGCGCCA
CGCCTTTCGGGAGTACCGCAGCCTAAACAGTAGCCAGGACTCGGCCATAGATATCCGCAACATGACCATGTGGTCCCTCC
ACACGCACAACTACAAGTTCCTGCCCAAGCTCAAGCCCAATTCCACGATTGCCCTAAAGCGCTGGTACCGCAACATGCAA
ACTTACGTGGCCAGCTTTGCGTATCTGAGGCGCCAGCAGATCCGCTGGGATCAGCGGTCCATCACCCGCGAGTCCAGCAC
CGCCCGCGAGCTGCGCGAGCTGCTCCTGAGCTCGCGGCGCATCCTCTGCGAGCTGGAGACAGCCGTCAACCAGACGCAGA
GTCCGCGCCAGAAGCAGCGGCGCAGTGGTGCGGCGGTCACAGCAGTTGGCGGCACCACCATGCTGGGTCAGCAGCTGCCA
CAGATCTCGCGTCTCGAGATGAACAAGCGTTTGAAGCTGCGCTCCAAGACGAGTGGGCCCGGTATGGGTGGTGCTGCTTC
CAGTGCATCCATGGCGGCGGGCGAGGCGGACTCGATCGATATGCGCTTTGTGAAGCACCACTACTACGACTTTTTGCGCA
CCATGTACCAGCTGCTGCGGCGGGATGGCAAGCGGGTAAGGAGTCGGCCACGGAAGCACCACAAGAAGCAGCAGAGGAGC
CAGAAAAAGTTGCTACAGCAGCAGCAGCAGCTGGCGGATCAACTGGAGCAGCGTTGGCGCAGCTCCACCTTGAATGGCAA
GGAGTTCAACGAGGTATCCAAGCCAGTGGCCGGTGGTGCTGCTGGAGTTGCAGATGTTGCAGGTGTTTCCGGTGGTGGAA
GCAACCAATTTGCACGTGGCAGACGTGGAAAGCGCCAGTCGAAGCGCGTGCAGCGCACGTGAAATAGCATACACAACATT
CCCATATCTTTCCATTTCCCCTTACCTCAGGACTCGCCCCTTTCCTCTGTTCTACAAACCCCTAGCCTCAAATCCTTAAT
TTAACCGTTAATTGATCGATAGTAGCTTAAGTAAATTATTTGATTGACAGCACATAGTCTCTGTTCTCGAATTCATTGCA
AGTATTACCACATTCCGTATTTATTGACATTCGTCGAGAGTGAGAGAGAGGGAGAGAGAGAGAAATAGAGAGAGAGATAT
AGTTATATAGCATACGAAACCACAATCTGCAGTTGCCGTTCTAGTCACATAAGAGCAACCGCCAACCACCACCCACTGGA
AAGTATTATTCGCCACGCCCGCTTTGTAGCCCATTCCGCACCCGCATCGAGTACTATGTGACCCCCAGTAGGCTAAGCTA
ACCCATGGCATTCATGATCATAATTCCATATCCATATCCTTTAGGCTAAACTTTGATCCTAAGGCACACACACACACATT
TTTTTTTTTTCGTAGGCTAGCTTGTGTTTCGACATCTGTGATATAGTGCTTGACTAGTTCGTATTTAACCTAATTGTACA
TATATATTATATATAGATCGCATTGGGGTGGCATGTGGCCGCATCCATGCCTTCGTAGTCCTAAGCTCGCCCTTAGAAAT
CGATTTTCGTATTTATAGAACCGACCGACATATGACTAAGCCAGCAGCGGAATAAAGCGAACAATAAACTGAATTGAATT
TG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        upd1-RB
        FBtr0112847
        2443
        upd1-RC
        FBtr0343592
        2602
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        upd1-PA
        FBpp0074353
        413
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        upd1-PB
        FBpp0111760
        413
        upd1-PC
        FBpp0310189
        413
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (3)
        Reported As
        Symbol Synonym
        CG5993-RA
        (FlyBase, 1996-)
        os-RA
        (FlyBase, 1996-)
        upd1-RA
        Secondary FlyBase IDs
          References (2)